Ll_transcript_37908

• Id Trinity: FTRINITY_DN58902_c1_g1_i15
• Name Transcript: Ll_transcript_37908
• Sequence: ATTTGATTAGGTGAATATAAAATATGGTTTGGAAATTGGAAGGATGAGGTGAGATGGTAAATCCATTGTTCATAATTGTACTAAAAAACACCATTGTTCA AAGACACTGGATCCAGCTTTTGACACTGAAAACTCTTCTCCAAGCCTTCTACGTTCCTCACTCCCACGAATCTATAATACTCTATGCATTCATTTCATTG ATCTAATCTCAAATCACAAATCTTAAACCCACCTTAATCTCCCACAACATCAAAAATCCCAATTCTGCATCAAAGTTTCAATCTTTACCTTTTTTCCCCA CAACTCAATTTCACTCAATTCCTTCATTCATCAATGTCACACGTTCTACACCAAAGACCTCTCCAAAACCCATTTTCTAACCCCTTCTCTTTCTCACCAC CTTCTTCCACAAATCCCAAAAGACCCATTTCCCTTTTTACCCCTACAACCCTCCTTGCCCTTTTACTCTTCATCATTGTAGTGGGTTTCTTATGCCCTTG GGTAGGACTTATGCCCCAAAACATGATATTTTCCTCTGTTTCAAAACCTTATTCTGTTGTTTCTTCCAAATGGGGTCACTATACATTGGACAAAGCATTG AACTTTGTGGCCAAAAATGGGACTGTGATTGTTTGTATTGTGAGCCAGCCTTACTTGCCCTTTTTGAATAACTGGTTGATTAGTGTTACTAGACAGAAGA GACAGGATATGGTTCTTGTTATAGCTGAGGATTATGCTTCTTTGGATAAGGTTAATGAGCATTGGCCTGGCCATGCTGTACTTATTCCTCCTGTGCTTGA TGCTGAAAATGCTCATAAGTTTGGTTCTAAGGGTTTCTTCAACTTTACTGCCAGGAGGCCAAGCCATCTGCTGAAGATTTTGGAGCTTGGATATAATGTA ATGTACAACGACGTTGATATGGTTTGGTTGGCTGATCCACTTGCTAAATTGGAAGGGAACCATGATGTGTACTTTTCAGATGATATGACTGCTATCAAAC CATTGAACCATTCTCATGATTTACCACCACCAGGAAAAAAGGGCCGCCCTTACATATGTAGTTGCATGATTTTCCTTCGCCATACTGGTGGAGCAAAGCT AGTGTTGAAAAAGTGGCTTGAGGAACTTCAGCTTCAGCCATGGTCTAGGGCCAAGAAATCGAATGATCAGCCTGCTTTTAACTGGGCTCTAATGAAGACT GCAAAAGAGGTGGATATGTACCTTCTGCCACAGGCTGCATTCCCTACAGGCGGATTATATTTCAAGAACAAGACATGGGTTAAGGAAACTAAAGGATTAC ATGTTATAATCCATAATAACTACATCGTAGGTTTTGAGAAGAAGATAAAGCGATTTCGTGATTATGGCCTCTGGTTGGTAGATGATCATGCAGATGAGTC TCCTCTAGGCAGACTATGATCTAGATTAAACAAGTTTATCATCATCAACTTAGGTCCAAGCATTTAGATTCAGAACATACATTCTGCTAATCTGTTCGTC CTGCTTGCTCGTGGACGTTGTCTGAAGACATTTGGTGATTGCCAATCACCAAATGATGGGTTGACAAACTTGATCTTCGGTTTTCCAATATGTGAAGAAA AATGTGCTTACAAATGGCTGATTTTGTTTCAAGGTCCTAAGAAGAAAAGGGTGGTTGTTAGGATCCAAAATAAGAATCCTATTTGATAGTATTAGTTCTA GAATAAAATAAATAAGATCCTATTTGATAGTATTAGTTTTAGAATAATATAAATAAGATCATATTTGATAGTATTAGTTTTAGACCTATTTGGGTCGGGC TTATTTAGTTAGTAGGATTACAATAATATAAATAAGATGATTCTCATTAGGTTAGCACAAGTTTTAGAAAGTTGAATAAGGATTAAGGGTTCACTCTTGT AAGAAGGTTTCCTTCTTGATTTCAGAATTCTTTCAATAAAATTGAGTATTGTTTCTTTTCCTGTCTTTCTCTATCCGATTCCATATCAGTTAGGTTATTT CCCATAACCTAACACATGTTTATTATCTTCACATGCTAGTAATCTATACAAGAAAATTTGATCATTTCTCTGAAATACAAAGCCAATGCATAGATTCTTC ACCTTCTGTAAACACTTCACTTTAATTTTAGGAAGCATTTTTCTTCTCTCCATTAAGCAGCGACTTTAAGCTTTTAGTTCTTATCATTTCATTGATACAG TAGTTATAGCTTTCTGATGGTGTAAAGTCAAATATAGTTTATTCAACTAAACAATATTTTCATTATTTTCTGAAGAGTTCAAGAGCAAGAGGCAATGCAA TGCCATCGTCCTTTACAATTTCTGGCGATGATATTCCCGAAATTTTTAGTAACATGATGAACTCACATTTTTTACATCATGAAAGCGAAGAAGGTATATC ATATGTCAGTCGATCAGTTATAGACTTGTCTGCTGGTGGTGATGATGCACCCTCTAGGCAACCATAAGATCAAATGAATGGAAGATCAGCACCAAATTAA GCTATTTTAGCATTCTGGGTTGTAAAACACTCGCAACATTAACACCAAATTTATTTGTTAAAGGATTGCAAAGCTAACTGAAAAGTTTCTCCATTTTAAC ATCTTAGAACTTTGAGACACTATCCCTTGGGGTTGGGATCCTCTCAGGTACTGGACCCTCCAGTACTGGAATGTGAGGCTCATAATTTATTTCAGCATTT GCATTATCTTTTTAAAGTTTTTTTTAAAATCTATACCGTTTATTTTTTTTTAACGCCATGTGTCACCATCTAAGATAACGTTTATGAAGTATAGATTAAA CGGACACATGGCGTTAAAAAAACTTCTTGCTTACTCACATGGATGACAATGAAAACTGAATCTATAGATATCCAC
• Tissue: flowers
• Gene name: LI_gene_81042;
• Additional information: details;

Expression of Ll_transcript_37908

FPKM

• FPAB: 3
• FPNAB: 4.2
• LF1: 3.3
• LF2: 2.9
• LF3: 3
• LF4: 3.3
• UF1: 4.7
• UF2: 3.3
• UF3: 3.2
• UF4: 3.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_37908

• Blastp: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 74.58% of identity
• Blastx: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 82.27% of identity
• Eggnog: BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)(ENOG4111Z77)
• Kegg: Link to kegg annotations (AT4G01220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460054.1)
• Pfam: Nucleotide-diphospho-sugar transferase (PF03407.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;