Ll_transcript_38968

• Id Trinity: FTRINITY_DN58903_c0_g2_i1
• Name Transcript: Ll_transcript_38968
• Sequence: CAAAATTGTCCATTTCTAATTTTTTGTTAAAATAAATTAAAATCCAAAATCACTTTCATTTCTCACTCTCTCGCTCACACTTATTTCGTTTACTTCTCAA AACCCTCTCTTCAGATTCAGAGAGAAAACACACAACCTTCGAATCGGGTTTTGTGTTCAGCTCAGTGAAACGCTTAGAGGACGCGATTTTTTGCTGTTGA GGTGAGAAAGAGGATTCTTTTAAAGTTATGGAGGATAATCCCCCTTCAAATTTTTTGGATGGGGAGGTCGTCGGAATAAGATTTGGCATGGCTACACGCC AGGAAATTTGTACAGCGTCCATTAGTGACTCTGCAATTAGTCATGCTAGTCAGCTGTCAAATCCTTTTCTTGGCCTTCCCCTTGAATTTGGAAGATGTGA ATCATGTGGTGCTTCTGAAGCTGGGAAATGTGAAGGCCACTTTGGTTATATTGAACTACCTGTTCCAATATACCATCCAAGCCATGTCAGTGAATTGAAG CGGATGCTGAGCCTGGTTTGTTTAAACTGCTTGAAAATGAAAAAAACCAAGTTTCCAGCATCAAACAGTGGTGTAGCACAGAGACTATTACCTTCCTGTT GTCCGGACACTAATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAACCGATGGGGCTTGTTATTTGACACTAAAGGTGTCAAAGTCGAAGATGCAGCC TAGTTTTTGGAGCTTCTTAGAAAAATATGGCTATCGATATGAGGGTTCAAATATTCGAGCTTTGCTTCCTTGTGAGGCAAAGGAGATTATTAAGAGAATT TCTCATGAGACCAAGAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGCTATGTTTTGAAGTCTCTTCCTGTACCACCAAACTGCTTATCAGTGC CAGTGGCTTCAGATGGCATCAGTGTCATGTCTTCGGACCCTTCCATAACAATTCTCAGAAGATTGCTCAGGAAGGTTGAAGTAATCAGAAGCTCTAGATC TGGTGAACCAAACTTTGAGTCTCATCAAATAGAAGCAAATGAATTGCAGTCAGTTTTTGATCAGTATCTTCAAGTAAGGGGCACTTCTAAGGCAGCCCGG GATATAGAAACTCATTATGGGGTCAATAAAGAGCTCAATGAATCATCAACAAAAGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAG GTTTCTCTTCTCGCAGTGTTATCACTGGAGATGCCTACAAGAAAATTAATGAAGTTGGAATTCCGGTTGAAGTAGCCCAAAAGATTACCTTTGAGGAAAG AGTTAATATTCATAACTTGAGCTATCTGCAAAAGTTAGTTGACGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTAAGGGAAGGC TCAAAGGGCCACATTTATCTTAAGCCGGGTCAGATAGTCCATCGGAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAAC ACTCGTTACAGGCACTGCAAGTTTACATCCATGATGACCATACTGTCAAAATTAATCCTCTCATTTGTGGGCCCCTTGGGGCTGATTTTGATGGAGACTG TGTCCATCTATTTTACCCACAGTCACTTGCTGCTAAAGCTGAGGTGTTGGAACTATTCGCCGTGGAGAAACAGCTGCTAAGTTCTCACAGTGGTAATCTG AACCTACAACTGACTTCTGATTCACTATTGTCACTGAAGATGCTGTTCAAGACTTGTATTTTGGATAGAGTGGCAGCTCATAGATTGGCTATGTTTCTTA CCCATCCATTGCCTAGGCCTGCCGTGCTCAAAGCCAATTCTGGTGACGCTTGGACTGCCATGCAACTTTTACAGTGTGCACTGCCCTCTTCTTTTGATTG TGCTGGAGGCCGTTACTTGATTAGCCATAGTGATATTGTGGAGTTTGATTTCAGTAGGGATCTTCTGCCAACTATGATAAATGAAATCGCAGCCTCAATT TTCTTTTCAAAAGGACCTCAGGAAGCACTAAAATTTTTTGACGTTATTCAGCCCTTTTTGATGGAGAACATATTTGCTGATGGGTTTAGCGTTGGTCTTC AGGATTTCTCGATATCCCGGGCGCGGAAAAGAATTATTAATAGAAGCATTGCGAAAGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGCT GGTGGCACAACAACTGGAAAAGCACATTGAAGATGTTGAAAAACCTGTTATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAA AGTAAGTCGGCCATTGACAAGGTGGTTCAACAAATGGGGTTCTTAGGCCAACAGCTTTTTGAAAGGGGAAGATTCTACTCAAGGGAGTTGATTGAGGATA TTGCATCCCATTTCCACACGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAATATGGGCTGCTTAAAGGATGTTTTTTTCACGGCTTGGATCC ATATGAAGAGATGGTGCATTCAATTTCCACTAGAGAAATACTTGTGCGTTCCTCGAGAGGATTATCTGAGCCGGGAACGCTATTCAAGAACTTGATGGCC ATCCTTCGTGATGTTGTGGTTTGCTATGACGGGACAGTACGGAATGTTTGCAGCAATTCGGTCATTCAGTTTGAGTATGGGATACAAGCAGGAGATACGA CTCAAAACTTATTCCCGGCTGGTGAGCCTGTTGGGGTCTTAGCAGCAACTTCTATGTCAAATCCTGCATATAAGGCCGTTCTTGATGCTAGTCCAAGCAG CACTTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGCCAATTTTAGGAATGAACCTATTGATCGTCGTGTTATTTTGTATTTGAATGACTGC TGTTGTGGAAGGAGTTATTGCATTGAACATGCAGCATATGCAGTTAAAAATCAATTGAGAAAAGTCACTCTCAAGGACATATCAGTAGAGTTCATCGTCG AATATCAACAGCAGCGAAATCGCAAGGACAGTTCTGAAATTGCTGCTGGGCTTGTTGGCCACATTCATCTGGATGAGGTTATGCTAAAGAAGCTAAAGGT CAATTTGGATGAAGTTTTGCAAAGATGCCAGGAAAGACTTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGACTGAGTTGGATTTC AGCGAGTCTTGCTATTGTTCACATCATTCTGCACCATGTGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAACTGCAAACATCCTGT CTGACATGATCTGCCCAGTTTTGTTAGAGGCAGTAGTCAAAGGAGATCCACGTATTAGCTCTGCAAGTATAATCTGGGTTAATCCAGACACAAACATGTG GGTCCAAAATCCCTCCAAATCTCCAAAAGGTGAGTTGGCCCTAGACATCGTTCTTGACAAGGCAGCTGTGAAACAAAGTGGCGATGCTTGGAGGATTGTC CATGACTCATGCCTTCCTATCCTTAATTTGGTTGATACAAGACGGTCAATCCCTTACGCTATTAAGCAAATTCAAGAGCTGTTCGGGATCTCATGTACAT TTGTTCAAGCAATTCAGCGTCTTGCTGCATCAGTAAAAATGGTAGCCAAAGGTCTTCTCAGAGAGCATCTCATCCTCTTAGCAAGTAGCATGACTTGTGG TGGGAATTTGGTGGGCTTTAACACCGGAGGATATAAAGCACTGGCTCGCCAACTAAACATCCGAGTACCATTTACTGATGCTACCCTCTTTACACCTCGA AAATGTTTCGAGCGTGCAGCTGAGAAGTGCCACACAGATTCTTTATCAAGCATAGTTGCCTCCTGTTCATGGGGTAAACACGTGGCTGTGGGTACAGGAT CAAAGTTTGATATTGTATGGAATGCGAAAGAGATAAAATCCAGTGAGAATGGCGGGATGGATGTGTACAATTTTCTGTACATGGTGAAAGGCTTTACTAA TGGAGAAGAAAAAAATTCGTGTTTGGGTGAAGACATCGATAATTTGCTACAAGAGGATGATATGGATTGGGGTATGTCTCCCCAGCATATGTCTGGGTTT GATGATGCAGTATTTGAAGATAACTGTGAACTACCCAATGGTTGGGATATTAATACAAATACGACTGAAGTAAAGTCCAATGATTGGTCTGGTTGGGGAT CAAATAAAGCTGACGATGGATCTAAAAATTTCCAGGAGGATTCTTGGAGCTCTGGAAAGCAGAAAACTGATGTTGTCGAAGAAGAATCTTCCAGGTCCAA TGCCTGGAATGACAGCACAAATAAAATAGTGACAGAATGTAATGATTGGTCAGCCTGGGGAGGAAACAAATCTGAAACTGAAGGTGGTAGTTCTGATAAA GCCCAGGAGAATTCTTGGAGCTCTGGTCAGAAGAAAGCTAATGTTACCCACGATGATGATCCTAAGTCCAGTGCTTGGGATGAAGACACCAACCAAACAA AAACAAAGTCAAATGATTGGACGGCCTGGGGAGGAAAGAAACCGGAAATACAAGATGGTGGGTTTAAAAGAGCAGAAGAGGATTCTTGGAGCTCTGGTAA CAGGAAAGCTAATGTTGTCCAAGAGGACTCTTCTAAGCCTGGTGCGTGGGATGGCAACACCGACCAAGCAAAAACAAAGTCAAATAATCAGTCGGCTTGG GGAGGAAATAAATCTGTGGTACAAGATGGTGGGGGCAGAAGTGCCCAAGAGGAATCTTGGAGCTCTGGTCAGGGGAAAGCTAATGTTATCCAAGATAACT CTTCTAAGCCTGGTGCGTGGAATGGCAGCACCGACCAAGCAAAAACAAAGTCAAATAATCAGTCGGCTTGGGGAGGAAATAAATCTGTGGTACAAGATGG TGGGGGCAGAAGTGCCCAAGAGGAATCTTGGAGCTCTGGTCAGAGGAAAGCTAATGTTATCCAAGATAACTCTTCTAAGCCTGGTGCGTGGAATGGCAGC ACCGACCAAGCAAAAACAAAGTCAAATAATCAGTCGGCTTGGGGAGGAATTAAATCTGTGGTACAAGATGGTGGGAGCAGAAGTGCCCAAGAGGAATCTT GGAGCTCTGGTCAGGGGAAAGCTAATGTTATCCAAGATAACTCTTCTAAACCTGGTGCTTGGGATGCAAAAACTGATCAAGCAAAAACAAAGTCAAATGA ATGGTCAAGCTGGGGACGAGAGAAATCTGAAGCACAAGATGGTGGGTTTGGAAGAGCCCATGAGGATTCTGGGACTTCCAGGAAGTGGAATACTGAATCT AATGTTGGATCTAAAGTTATCCAAGAAGAAGCATCTTGGTCCAATGCTCAGGATGCAAACACAGACCAGACGAAAACCAAGTCAAATGATTGGTCTGCCT GGGGAAGAAGTAAAGATGAAATACAAGATGGCCGGTCAGAAAAAGCCAGAGAGGACTCTTGGGGCTCTGCTAAATGGAAAGCTGAATCAAATGTTGGACC TGATGTTAGACAAAAAGATTCTTCCGGGTCTAATGATTGGGAAACTAATTTCAACAAATCCTCAGAAAATCCAGCATGGGGTTGTTCCCAAAATGAGTCA CGTCAAGCTACAAGTTCCCAGGGCTGGGACTCGCAAATTGCTTCAGCTAATTCTGACCGTGACAAAAACTTCCAATGGGGAAAACCCAAATCCTCCCAAT GGCAAGCATTGGATTCCCAAAATGAGTCAAATCAGGCTGCAAGTTCTCAAGGATGGGACTCGCAAGTCGCTGCATCTAACTCTGACAATGACAAAAGCTT CCAATGGGGAAAGCAGGGCAGAGAGTCATTCAAGAAAAGCCGCTTTGAAGGTTCGCAAGGGCGGGGTTCAAATGTTGGTGACTGGAGAAATATGAATCGC CCCCCCAGACCACCACCTCCAGTGTACACACCTGAGGAACAGGAAGTTCGCAAGGATATTGATTCCATTATGCAGTCAATCAGACGTATCATGCAACAAG AAGGGTACAATGATGGGGATCCGCTGGCGGCAGAGGATCAAGCATTTGTGCTTGAGAATGTATTTGAACACCATCCAGATAAAGAAACCAAAATGGGTGG TGGAATTGATCATGTCATGGTTAGCAGACACAGCAATTTTCAGGAAAGTAGATGCATGTATGTGGTTTTGAAGGATGGTAAAAAGGAAGACTTTTCCTAC AGGAAGTGCCTGGAAAACCTTGTAAGGAAGAAGTATCCAGAGGTTGCTGAATCATTCATCGGCAAGCATTTCCGGAAACCTCGTGGAAGAGCAGGAGGGG ACCAGGCCCCAACAACTCCATTGCCGAGTTCTACTGAAGCAAATGAGTAGAAAACTAGAGCTGAGTTCATAGTTTTGTACAGAAAAAGGCCTTAGTTGAG GCCACTGAATAGTTTATCACAACAGCTCAATTTTCCTATAGGAAACAGTGTTTCTTTCTCTTTTGGTTGACCATGTTGATGCTTAGGTGTTAATTTTTTG TGTAGCATGTGGATGATGATAGCACAGATGTTCATAATGTTTGAATGATAGCGGCAGGTATGCTTGTCAAACTCTACCCTGAAATTCATTTTATAAACCC TTAACTGGTTTACGCATTATCATCTTTAGTGTTCAAAATCTTTAATTGTAT
• Tissue: flowers
• Gene name: LI_gene_81048;
• Additional information: details;

Expression of Ll_transcript_38968

FPKM

• FPAB: 0.2
• FPNAB: 0.9
• LF1: 0.3
• LF2: 0.3
• LF3: 0.2
• LF4: 0.1
• UF1: 0.3
• UF2: 0.2
• UF3: 0.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_38968

• Blastp: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 50.26% of identity
• Blastx: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 50.26% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT2G40030)
• CantataDB: Link to cantataDB annotations (CNT0000674)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449371.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;