| Id Trinity | FTRINITY_DN58903_c0_g2_i14 |
|---|---|
| Name Transcript | Ll_transcript_38987 |
| Sequence | CAAAATTGTCCATTTCTAATTTTTTGTTAAAATAAATTAAAATCCAAAATCACTTTCATTTCTCACTCTCTCGCTCACACTTATTTCGTTTACTTCTCAA AACCCTCTCTTCAGATTCAGAGAGAAAACACACAACCTTCGAATCGGGTTTTGTGTTCAGCTCAGTGAAACGCTTAGAGGACGCGATTTTTTGCTGTTGA GGTGAGAAAGAGGATTCTTTTAAAGTTATGGAGGATAATCCCCCTTCAAATTTTTTGGATGGGGAGGTCGTCGGAATAAGATTTGGCATGGCTACACGCC AGGAAATTTGTACAGCGTCCATTAGTGACTCTGCAATTAGTCATGCTAGTCAGCTGTCAAATCCTTTTCTTGGCCTTCCCCTTGAATTTGGAAGATGTGA ATCATGTGGTGCTTCTGAAGCTGGGAAATGTGAAGGCCACTTTGGTTATATTGAACTACCTGTTCCAATATACCATCCAAGCCATGTCAGTGAATTGAAG CGGATGCTGAGCCTGGTTTGTTTAAACTGCTTGAAAATGAAAAAAACCAAGTTTCCAGCATCAAACAGTGGTGTAGCACAGAGACTATTACCTTCCTGTT GTCCGGACACTAATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAACCGATGGGGCTTGTTATTTGACACTAAAGGTGTCAAAGTCGAAGATGCAGCC TAGTTTTTGGAGCTTCTTAGAAAAATATGGCTATCGATATGAGGGTTCAAATATTCGAGCTTTGCTTCCTTGTGAGGCAAAGGAGATTATTAAGAGAATT TCTCATGAGACCAAGAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGCTATGTTTTGAAGTCTCTTCCTGTACCACCAAACTGCTTATCAGTGC CAGTGGCTTCAGATGGCATCAGTGTCATGTCTTCGGACCCTTCCATAACAATTCTCAGAAGATTGCTCAGGAAGGTTGAAGTAATCAGAAGCTCTAGATC TGGTGAACCAAACTTTGAGTCTCATCAAATAGAAGCAAATGAATTGCAGTCAGTTTTTGATCAGTATCTTCAAGTAAGGGGCACTTCTAAGGCAGCCCGG GATATAGAAACTCATTATGGGGTCAATAAAGAGCTCAATGAATCATCAACAAAAGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAG GTTTCTCTTCTCGCAGTGTTATCACTGGAGATGCCTACAAGAAAATTAATGAAGTTGGAATTCCGGTTGAAGTAGCCCAAAAGATTACCTTTGAGGAAAG AGTTAATATTCATAACTTGAGCTATCTGCAAAAGTTAGTTGACGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTAAGGGAAGGC TCAAAGGGCCACATTTATCTTAAGCCGGGTCAGATAGTCCATCGGAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAAC ACTCGTTACAGGCACTGCAAGTTTACATCCATGATGACCATACTGTCAAAATTAATCCTCTCATTTGTGGGCCCCTTGGGGCTGATTTTGATGGAGACTG TGTCCATCTATTTTACCCACAGTCACTTGCTGCTAAAGCTGAGGTGTTGGAACTATTCGCCGTGGAGAAACAGCTGCTAAGTTCTCACAGTGGTAATCTG AACCTACAACTGACTTCTGATTCACTATTGTCACTGAAGATGCTGTTCAAGACTTGTATTTTGGATAGAGTGGCAGCTCATAGATTGGCTATGTTTCTTA CCCATCCATTGCCTAGGCCTGCCGTGCTCAAAGCCAATTCTGGTGACGCTTGGACTGCCATGCAACTTTTACAGTGTGCACTGCCCTCTTCTTTTGATTG TGCTGGAGGCCGTTACTTGATTAGCCATAGTGATATTGTGGAGTTTGATTTCAGTAGGGATCTTCTGCCAACTATGATAAATGAAATCGCAGCCTCAATT TTCTTTTCAAAAGGACCTCAGGAAGCACTAAAATTTTTTGACGTTATTCAGCCCTTTTTGATGGAGAACATATTTGCTGATGGGTTTAGCGTTGGTCTTC AGGATTTCTCGATATCCCGGGCGCGGAAAAGAATTATTAATAGAAGCATTGCGAAAGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGCT GGTGGCACAACAACTGGAAAAGCACATTGAAGATGTTGAAAAACCTGTTATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAA AGTAAGTCGGCCATTGACAAGGTGGTTCAACAAATGGGGTTCTTAGGCCAACAGCTTTTTGAAAGGGGAAGATTCTACTCAAGGGAGTTGATTGAGGATA TTGCATCCCATTTCCACACGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAATATGGGCTGCTTAAAGGATGTTTTTTTCACGGCTTGGATCC ATATGAAGAGATGGTGCATTCAATTTCCACTAGAGAAATACTTGTGCGTTCCTCGAGAGGATTATCTGAGCCGGGAACGCTATTCAAGAACTTGATGGCC ATCCTTCGTGATGTTGTGGTTTGCTATGACGGGACAGTACGGAATGTTTGCAGCAATTCGGTCATTCAGTTTGAGTATGGGATACAAGCAGGAGATACGA CTCAAAACTTATTCCCGGCTGGTGAGCCTGTTGGGGTCTTAGCAGCAACTTCTATGTCAAATCCTGCATATAAGGCCGTTCTTGATGCTAGTCCAAGCAG CACTTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGCCAATTTTAGGAATGAACCTATTGATCGTCGTGTTATTTTGTATTTGAATGACTGC TGTTGTGGAAGGAGTTATTGCATTGAACATGCAGCATATGCAGTTAAAAATCAATTGAGAAAAGTCACTCTCAAGGACATATCAGTAGAGTTCATCGTCG AATATCAACAGCAGCGAAATCGCAAGGACAGTTCTGAAATTGCTGCTGGGCTTGTTGGCCACATTCATCTGGATGAGGTTATGCTAAAGAAGCTAAAGGT CAATTTGGATGAAGTTTTGCAAAGATGCCAGGAAAGACTTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGACTGAGTTGGATTTC AGCGAGTCTTGCTATTGTTCACATCATTCTGCACCATGTGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAACTGCAAACATCATGT CTGACATAATTTGCCCGGTTTTGTTAGAGACAGTAGTCAAAGGAGATCCACGTATAAGCTCTGCAAATATAATCTGGGTTAATCCAGATACAAACACATG GGTCCGAAACCCCTCCAAATCTCCAAAGGGTGAATTGGCTCTAGATGTCATTCTCGACAAGGCAGCTGTGAAACAAAGTGGCGATGCTTGGAGGATTGTC CATGACTCATGCCTTCCTATCCTTCATTTGATTGATACAAGACGGTCAATCCCTTATGCTATTAAGCAAATTCAAGAGTTACTTGGAATCTCATGTACAT TTGCTCAAGCAATTCAGCGTCTTGCCACGTCAGTAAAAATGGTTTCCAAAGGTCTCCTTAGAGAGCATCTCATTCTCTTAGCAAGTAGCATGACTTGTGG TGGGAATTTGGTGGGCTTTAACACTGGAGGATATAAAGCACTGGCACGACAACTAAACATCCAAGTACCATTTACTGATGCGACACTGTTTACACCTCGA AAATGTTTTGAGCGAGCTGCTGAAAAGTTCCATACAGATTCTTTATCAAGCGTAGTTGCCTCCTGTTCATGGGGTAAACATGTGGCTGTGGGTACAGGTT CAAAATTTGATGTCGTATGGAATGCGAAAGAGATAAAGTCCAGCGAGAATAGAGGGATGGATGTATACAATTTTCTTTATATGGTGAAAGACTTCACCAG TGGAGAAGAAGAAAAAAATACTTGTTTAGGTCAAGACATTGATGATCTGCTAGACGATGAAAATATGGATTGGGGCATGTCTCCCCAACACACGTCTGGT TTTGATGATGCAGTCTTTGAGGAGAACTCTGAACTACCAAATGCTTCAACTTCCAATGGTTGGGGATCAAATAAAGCTGAAGGTGCATCTGAAAATGCCA AGGAGGATTCTTGGAGTTCTGGAAAGCAGAAAACTGATGTTGTCCAAGAAGACTCTTCTAGGTCCAATGCTTGGGATGCCAATACAAAGAAAACAGAGAC GAAGTCTAATGATTGGTTGGCCTGGGGAGGTAACAAATCTGAAACTCAAGATGGCAGTTCTGATACAGCCCAAGAGGATTCTTGGAGCTCTGGTCAGAGG AAAGCTAATGTTACCCAAGTAGATGCTCCTAAGTCTGGTACTTGGGATGCAGACACCAACCAAACAAAAGCAAAGTCAAATGATTGGACGGCATGGGGAG ACAAGAAATCTGAAATACAAGATGTCGGGTTTAAAAGAGCAGAAGAGGATTCTTGGAGCTCTGGTAATAGGAAAGCCAATGTTGCCCAAGAAGACTCTTC TAAGCCCGGTGCATGGGATACTAACACCGACCAAACAAAAACAAAGTCGAATGATTGGTTGGACTGGGGTGGAAAGAAATCTGAAATTCAAGATGGTGGG TCCGGACGAGACCAAGAGGATTCTTGGAACTCTGGTCAGAGGAAAGCTAGTGTTATCCAAGATGACTCTTCTAAGCCTGGTGCTTGGGATGCAAAAGCCA ACCAAGCAAAAACAACATCAAATGAGTGGTCAGGGTGGGGAGGAAAGAAATCTGAAGTGCAAGGTGGTGGGTTTGAAAGATCCCAAGAGGATTTTGGGAG CTCCCGGAAGTGGAATGCTGAATCTAAGGTTGGATCCAAAGTTATCCAAGAAGAAGCATCAAGGTCTAATGCTTGGGATGCAAATACAGACCCGAAAAAA ACGAAGTCAAATGATTGGTCTGCTTGGGGAAGTAAAGGTGAAATACAAGATAGCAGGTCAGAAAGATCCCAAGAGGATTCTTGGGGCTCTGCTAAGTTGA AAGCGGAATCAAATGTTGGAGCTGATGTTAGACAAAAAGACTCTTCTAGGTCTAATGCTTGGGAAAGTAATTTCAACAAATCCTCAGAAAACCCAGCATG GGGTTCCCAAAATGAGTCAAATCAAGCTGCAAGTTCCCAAGGATGGGACTCACAAATCGCTTCTGCAAATTCTGGCCGTGACAAAAACTTTCAATGGGGA AAATCCAAATCCTCAGAAAGCCAATCATGGGATTCCCAAAATGAGTCAAATCAGGCTGCAAGTTCTCAAGGATGGGACTCACAAGTCGCTTCAGCTAATT CTGACAGTGACAAAAGCTTTCAATGGGGAAAGCAGGGCAGAGAATCATTCAAGAAAAACCGCTTTGAAGGTTCGCAAGGACGCGGTTCAAATGCAGGTGA CTGGAGAAATATGAATCGCCCCCCCAGACCACCACCTCCAATGTACACACCCGAGGAACAGGAAGTTCGTAAGGATATTGATTCTATTATGCAGTCAATC AGACGTATCATGCAACAAGAAGGGTACAATGATGGGGATCCGCTAGCAGCAGAGGATCAAGCATTTGTGCTTGAGAATGTCTTTGAACACCATCCAGATA AGGAAACCAAAATGGGTGATGGAATTGATTATGTCATGGTATCCTCTGCTTCTCTTTTGTTCTCCTTTTAGCTCTTAGTTACAATTATAACTGATCTCAT CATGGTTACCCTAAGATAACACTGTCTTCTTACCTAAATTTCAGGGTTTGAACCTTGCGATTATATTGTTTACCTTTTTTCCCTTTCATCTACATGTTTG ATAAGTTTTCAGCTTATGCTTTGCATCTATGCATATTGAGAATATTAATGTGTCTCTCTTTGTCAATGTTGGGACTTGTTTTTACAGGTTAGCAGACACA GCAATTTTCAGGAAAGTAGATGCATGTATGTGGTTTTGAAGGATGGTAAAAAGGAAGACTTTTCCTACAGGAAGTGCCTGGAAAACCTTGTAAGGAAGAA GTATCCAGAGGTTGCTGAATCATTCATCGGCAAGCATTTCCGGAAACCTCGTGGAAGAGCAGGAGGGGACCAGGCCCCAACAACTCCATTGCCGAGTTCT ACTGAAGCAAATGAGTAGAAAACTAGAGCTGAGTTCATAGTTTTGTACAGAAAAAGGCCTTAGTTGAGGCCACTGAATAGTTTATCACAACAGCTCAATT TTCCTATAGGAAACAGTGTTTCTTTCTCTTTTGGTTGACCATGTTGATGCTTAGGTGTTAATTTTTTGTGTAGCATGTGGATGATGATAGCACAGATGTT CATAATGTTTGAATGATAGCGGCAGGTATGCTTGTCAAACTCTACCCTGAAATTCATTTTATAAACCCTTAACTGGTTTACGCATTATCATCTTTAGTGT TCAAAATCTTTAATTGTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81048; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38987
| Blastp | DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 48.12% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 51.46% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086) |
| Kegg | Link to kegg annotations (AT2G40030) |
| CantataDB | Link to cantataDB annotations (CNT0000674) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449371.1) |
| Pfam | RNA polymerase Rpb1, domain 1 (PF04997.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |