Ll_transcript_38969

Id TrinityFTRINITY_DN58903_c0_g2_i2
Name TranscriptLl_transcript_38969
SequenceCAAAATTGTCCATTTCTAATTTTTTGTTAAAATAAATTAAAATCCAAAATCACTTTCATTTCTCACTCTCTCGCTCACACTTATTTCGTTTACTTCTCAA AACCCTCTCTTCAGATTCAGAGAGAAAACACACAACCTTCGAATCGGGTTTTGTGTTCAGCTCAGTGAAACGCTTAGAGGACGCGATTTTTTGCTGTTGA GGTGAGAAAGAGGATTCTTTTAAAGTTATGGAGGATAATCCCCCTTCAAATTTTTTGGATGGGGAGGTCGTCGGAATAAGATTTGGCATGGCTACACGCC AGGAAATTTGTACAGCGTCCATTAGTGACTCTGCAATTAGTCATGCTAGTCAGCTGTCAAATCCTTTTCTTGGCCTTCCCCTTGAATTTGGAAGATGTGA ATCATGTGGTGCTTCTGAAGCTGGGAAATGTGAAGGCCACTTTGGTTATATTGAACTACCTGTTCCAATATACCATCCAAGCCATGTCAGTGAATTGAAG CGGATGCTGAGCCTGGTTTGTTTAAACTGCTTGAAAATGAAAAAAACCAAGTTTCCAGCATCAAACAGTGGTGTAGCACAGAGACTATTACCTTCCTGTT GTCCGGACACTAATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAACCGATGGGGCTTGTTATTTGACACTAAAGGTGTCAAAGTCGAAGATGCAGCC TAGTTTTTGGAGCTTCTTAGAAAAATATGGCTATCGATATGAGGGTTCAAATATTCGAGCTTTGCTTCCTTGTGAGGCAAAGGAGATTATTAAGAGAATT TCTCATGAGACCAAGAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGCTATGTTTTGAAGTCTCTTCCTGTACCACCAAACTGCTTATCAGTGC CAGTGGCTTCAGATGGCATCAGTGTCATGTCTTCGGACCCTTCCATAACAATTCTCAGAAGATTGCTCAGGAAGGTTGAAGTAATCAGAAGCTCTAGATC TGGTGAACCAAACTTTGAGTCTCATCAAATAGAAGCAAATGAATTGCAGTCAGTTTTTGATCAGTATCTTCAAGTAAGGGGCACTTCTAAGGCAGCCCGG GATATAGAAACTCATTATGGGGTCAATAAAGAGCTCAATGAATCATCAACAAAAGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAG GTTTCTCTTCTCGCAGTGTTATCACTGGAGATGCCTACAAGAAAATTAATGAAGTTGGAATTCCGGTTGAAGTAGCCCAAAAGATTACCTTTGAGGAAAG AGTTAATATTCATAACTTGAGCTATCTGCAAAAGTTAGTTGACGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTAAGGGAAGGC TCAAAGGGCCACATTTATCTTAAGCCGGGTCAGATAGTCCATCGGAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAAC ACTCGTTACAGGCACTGCAAGTTTACATCCATGATGACCATACTGTCAAAATTAATCCTCTCATTTGTGGGCCCCTTGGGGCTGATTTTGATGGAGACTG TGTCCATCTATTTTACCCACAGTCACTTGCTGCTAAAGCTGAGGTGTTGGAACTATTCGCCGTGGAGAAACAGCTGCTAAGTTCTCACAGTGGTAATCTG AACCTACAACTGACTTCTGATTCACTATTGTCACTGAAGATGCTGTTCAAGACTTGTATTTTGGATAGAGTGGCAGCTCATAGATTGGCTATGTTTCTTA CCCATCCATTGCCTAGGCCTGCCGTGCTCAAAGCCAATTCTGGTGACGCTTGGACTGCCATGCAACTTTTACAGTGTGCACTGCCCTCTTCTTTTGATTG TGCTGGAGGCCGTTACTTGATTAGCCATAGTGATATTGTGGAGTTTGATTTCAGTAGGGATCTTCTGCCAACTATGATAAATGAAATCGCAGCCTCAATT TTCTTTTCAAAAGGACCTCAGGAAGCACTAAAATTTTTTGACGTTATTCAGCCCTTTTTGATGGAGAACATATTTGCTGATGGGTTTAGCGTTGGTCTTC AGGATTTCTCGATATCCCGGGCGCGGAAAAGAATTATTAATAGAAGCATTGCGAAAGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGCT GGTGGCACAACAACTGGAAAAGCACATTGAAGATGTTGAAAAACCTGTTATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAA AGTAAGTCGGCCATTGACAAGGTGGTTCAACAAATGGGGTTCTTAGGCCAACAGCTTTTTGAAAGGGGAAGATTCTACTCAAGGGAGTTGATTGAGGATA TTGCATCCCATTTCCACACGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAATATGGGCTGCTTAAAGGATGTTTTTTTCACGGCTTGGATCC ATATGAAGAGATGGTGCATTCAATTTCCACTAGAGAAATACTTGTGCGTTCCTCGAGAGGATTATCTGAGCCGGGAACGCTATTCAAGAACTTGATGGCC ATCCTTCGTGATGTTGTGGTTTGCTATGACGGGACAGTACGGAATGTTTGCAGCAATTCGGTCATTCAGTTTGAGTATGGGATACAAGCAGGAGATACGA CTCAAAACTTATTCCCGGCTGGTGAGCCTGTTGGGGTCTTAGCAGCAACTTCTATGTCAAATCCTGCATATAAGGCCGTTCTTGATGCTAGTCCAAGCAG CACTTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGCCAATTTTAGGAATGAACCTATTGATCGTCGTGTTATTTTGTATTTGAATGACTGC TGTTGTGGAAGGAGTTATTGCATTGAACATGCAGCATATGCAGTTAAAAATCAATTGAGAAAAGTCACTCTCAAGGACATATCAGTAGAGTTCATCGTCG AATATCAACAGCAGCGAAATCGCAAGGACAGTTCTGAAATTGCTGCTGGGCTTGTTGGCCACATTCATCTGGATGAGGTTATGCTAAAGAAGCTAAAGGT CAATTTGGATGAAGTTTTGCAAAGATGCCAGGAAAGACTTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGACTGAGTTGGATTTC AGCGAGTCTTGCTATTGTTCACATCATTCTGCACCATGTGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAACTGCAAACATCATGT CTGACATAATTTGCCCGGTTTTGTTAGAGACAGTAGTCAAAGGAGATCCACGTATAAGCTCTGCAAATATAATCTGGGTTAATCCAGATACAAACACATG GGTCCGAAACCCCTCCAAATCTCCAAAGGGTGAATTGGCTCTAGATGTCATTCTCGACAAGGCAGCTGTGAAACAAAGTGGCGATGCTTGGAGGATTGTC CATGACTCATGCCTTCCTATCCTTCATTTGATTGATACAAGACGGTCAATCCCTTATGCTATTAAGCAAATTCAAGAGTTACTTGGAATCTCATGTACAT TTGCTCAAGCAATTCAGCGTCTTGCCACGTCAGTAAAAATGGTTTCCAAAGGTCTCCTTAGAGAGCATCTCATTCTCTTAGCAAGTAGCATGACTTGTGG TGGGAATTTGGTGGGCTTTAACACTGGAGGATATAAAGCACTGGCACGACAACTAAACATCCAAGTACCATTTACTGATGCGACACTGTTTACACCTCGA AAATGTTTTGAGCGAGCTGCTGAAAAGTTCCATACAGATTCTTTATCAAGCGTAGTTGCCTCCTGTTCATGGGGTAAACATGTGGCTGTGGGTACAGGTT CAAAATTTGATGTCGTATGGAATGCGAAAGAGATAAAGTCCAGCGAGAATAGAGGGATGGATGTATACAATTTTCTTTATATGGTGAAAGACTTCACCAG TGGAGAAGAAGAAAAAAATACTTGTTTAGGTCAAGACATTGATGATCTGCTAGACGATGAAAATATGGATTGGGGCATGTCTCCCCAACACACGTCTGGT TTTGATGATGCAGTCTTTGAGGAGAACTCTGAACTACCAAATGCTTCAACTTCCAATGGTTGGGGATCAAATAAAGCTGAAGGTGCATCTGAAAATGCCA AGGAGGATTCTTGGAGTTCTGGAAAGCAGAAAACTGATGTTGTCCAAGAAGACTCTTCTAGGTCCAATGCTTGGGATGCCAATACAAAGAAAACAGAGAC GAAGTCTAATGATTGGTTGGCCTGGGGAGGTAACAAATCTGAAACTCAAGATGGCAGTTCTGATACAGCCCAAGAGGATTCTTGGAGCTCTGGTCAGAGG AAAGCTAATGTTACCCAAGTAGATGCTCCTAAGTCTGGTACTTGGGATGCAGACACCAACCAAACAAAAGCAAAGTCAAATGATTGGACGGCATGGGGAG ACAAGAAATCTGAAATACAAGATGTCGGGTTTAAAAGAGCAGAAGAGGATTCTTGGAGCTCTGGTAATAGGAAAGCCAATGTTGCCCAAGAAGACTCTTC TAAGCCCGGTGCATGGGATACTAACACCGACCAAACAAAAACAAAGTCGAATGATTGGTTGGACTGGGGTGGAAAGAAATCTGAAATTCAAGATGGTGGG TCCGGACGAGACCAAGAGGATTCTTGGAACTCTGGTCAGAGGAAAGCTAGTGTTATCCAAGATGACTCTTCTAAGCCTGGTGCTTGGGATGCAAAAGCCA ACCAAGCAAAAACAACATCAAATGAGTGGTCAGGGTGGGGAGGAAAGAAATCTGAAGTGCAAGGTGGTGGGTTTGAAAGATCCCAAGAGGATTTTGGGAG CTCCCGGAAGTGGAATGCTGAATCTAAGGTTGGATCCAAAGTTATCCAAGAAGAAGCATCAAGGTCTAATGCTTGGGATGCAAATACAGACCCGAAAAAA ACGAAGTCAAATGATTGGTCTGCTTGGGGAAGTAAAGGTGAAATACAAGATAGCAGGTCAGAAAGATCCCAAGAGGATTCTTGGGGCTCTGCTAAGTTGA AAGCGGAATCAAATGTTGGAGCTGATGTTAGACAAAAAGACTCTTCTAGGTCTAATGCTTGGGAAAGTAATTTCAACAAATCCTCAGAAAACCCAGCATG GGGTTCCCAAAATGAGTCAAATCAAGCTGCAAGTTCCCAAGGATGGGACTCACAAATCGCTTCTGCAAATTCTGGCCGTGACAAAAACTTTCAATGGGGA AAATCCAAATCCTCAGAAAGCCAATCATGGGATTCCCAAAATGAGTCAAATCAGGCTGCAAGTTCTCAAGGATGGGACTCACAAGTCGCTTCAGCTAATT CTGACAGTGACAAAAGCTTTCAATGGGGAAAGCAGGGCAGAGAATCATTCAAGAAAAACCGCTTTGAAGGTTCGCAAGGACGCGGTTCAAATGCAGGTGA CTGGAGAAATATGAATCGCCCCCCCAGACCACCACCTCCAATGTACACACCCGAGGAACAGGAAGTTCGTAAGGATATTGATTCTATTATGCAGTCAATC AGACGTATCATGCAACAAGAAGGGTACAATGATGGGGATCCGCTAGCAGCAGAGGATCAAGCATTTGTGCTTGAGAATGTCTTTGAACACCATCCAGATA AGGAAACCAAAATGGGTGATGGAATTGATTATGTCATGGTTAGCAGACACAGCAATTTTCAGGAAAGTAGATGCATGTATGTGGTTTTGAAGGATGGTAA AAAGGAAGACTTTTCCTACAGGAAGTGCCTGGAAAACCTTGTAAGGAAGAAGTATCCAGAGGTTGCTGAATCATTCATCGGCAAGCATTTCCGGAAACCT CGTGGAAGAGCAGGAGGGGACCAGGCCCCAACAACTCCATTGCCGAGTTCTACTGAAGCAAATGAGTAGAAAACTAGAGCTGAGTTCATAGTTTTGTACA GAAAAAGGCCTTAGTTGAGGCCACTGAATAGTTTATCACAACAGCTCAATTTTCCTATAGGAAACAGTGTTTCTTTCTCTTTTGGTTGACCATGTTGATG CTTAGGTGTTAATTTTTTGTGTAGCATGTGGATGATGATAGCACAGATGTTCATAATGTTTGAATGATAGCGGCAGGTATGCTTGTCAAACTCTACCCTG AAATTCATTTTATAAACCCTTAACTGGTTTACGCATTATCATCTTTAGTGTTCAAAATCTTTAATTGTAT BLAST
Tissueflowers
Gene nameLI_gene_81048; 
Additional informationdetails; 

Expression of Ll_transcript_38969

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_38969
BlastpDNA-directed RNA polymerase V subunit 1 from Arabidopsis with 48.16% of identity
BlastxDNA-directed RNA polymerase V subunit 1 from Arabidopsis with 51.46% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT2G40030)
CantataDBLink to cantataDB annotations (CNT0000674)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449371.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;