Ll_transcript_38971

• Id Trinity: FTRINITY_DN58903_c0_g2_i3
• Name Transcript: Ll_transcript_38971
• Sequence: AGTGTAGCTAGGGTTTTACCTTCAGCTCAGTGAAACACTGAAACTGGACGCATTTTTTCACTTCTGAGGTGGTAGAGGATACTTAATAAGTTATGGAGGA TAATTCCCCTTCAAATGTTTTGGATGGGGAGGTTGTCGGCATTAGATTTGGCATGGCTACACGCAAAGAAATTTGTACAGCGTCCATTAGTGACTCTGCA ATTAGTCATGCTAGTCAGCTGTCAAATTCTTTCCTTGGCTTACCTCTTGAATTTGGCAGATGTGATTCCTGTGGTACTTCGGAGGCTGGGAAATGCGAAG GCCACTTCGGATACATTGAGCTACCGGTTCCCATTTACCATCCAAGTCATGTCAGCGAACTGAAGCGGATGCTGAGCCTGGTTTGCTTGAACTGCTTAAA AATGAAAAAAACCAAGTTTCCAGCTTCAGGCAGTGGTGTTGCGCAGAGATTACTACCTTCCTGTTGTCCGGATACTAATGCCGCACAAGTTTCTATCCGG GAGGTCAAAACAACAGACGGGGCATGTTATTTGGCACTCAAGGTGTCCAAGTCAAAAATACAGCCTGGTGTTTGGAACTTTTTAAAAAAATATGGCTATC ACTATGGCAGTGATCATACTCGAGCTTTGCTTCCTTGTGAGGCGATGGAAATTATCAAGAGAATTCCTCTCGAGACCAAGAAAAAGCTTGCTGGAAAAGG ATATTTTCCTCAAGATGGATATCTTTTGAAGCATCTTCCCGTACCACCAAACTGCTTGTCTGTGCCAGCGGTTTCAGATGGTGTCAGTGTCATGTCTTCG GACCCTTCCATGACAATTCTCAGAAAATTGCTCAGGAAGGTTGAAATAATCAAAAGTTCTAGATCCGGCGAACCAAACTTTGAGTCTCATCAAATAGAAG CAAATGACTTGCAGTCAGTGGTTGATCAGTATCTTCAAGTAAGGGGTACATCTAAGGCAACCCGTGATATAGAAACTCATTATGGGGTCAATAAAGAGCT CAATGAATCGTCAACGAAGGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAGGTTTCTCTTCTCGCAGTGTTATCACTGGAGATGCC TATAAGAGAATTAATGAAGTAGGGATTCCGGTTGAAGTGGCCCAAAGGATTACTTTTGAGGAAAGAGTTAATATCCATAACTTGAGCTACTTGCAAAAGT TAGTTGATGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTGAGGGAGGGCTCAAAGGGCCACATTTATCTTAAGCCGGGCCAGAT AGTTCATCGAAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAACACTCGTTACAGGCACTGCAAGTTTACATCCATGAT GACCATACTGTCAAAATTAATCCTCTCATTTGTGGCCCCCTTGGTGCTGATTTTGATGGTGACTGTGTCCATCTATTTTATCCACAGTCACTTTCCTCTA AAGCTGAGGTGTTGGAGCTATTCGCTGTGGAGAAACAGCTGTTAAGTTCTCACAGTGGTAATCTGAACTTACAGCTGACTTCTGATTCACTGTTGTCACT GAAGATGCTGTTCAAGACTTGTATTTTGAATAGAATGGCAGCTCATAGATTGGCTATGTTTCTTACCTTGCCATTGCCTAGGCCAGCTGTGCTAAAAACC AGTTCTGGTGATGCTTGGACTGCCATGCAAGTTTTACAGTGTGCACTGCCCTCTTCTTTTGACTGTGCCGGGGGGCGTTACTTGATAAGGAATAGTGAAA TTGTGGAGTTTGATTTCAGTAGGGATCTTCTTCCGACTATGATCAATGAGATCGCGGCCTCAATTTTCTTTGCAAAAGGCCCTCAGGAGGCACTGAAGTT TTTTGACATTATCCAACCCTTTCTGATGGAGAACATATTTGCTGATGGGTTTAGTGTTAGTCTTCAGGATTTTTCAATATCCAGGGCACGGAAAAGAATT ATCAATAGAAGCATTGGGAAGGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGTTGGTGGCACAACAACTCGAAAAGCACATTCAAGATG TTGAAAAACCTGTCATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAGAGTAAGTCGGCCATTGACAAAGTTGTTCAACAAAT GGGGTTCTTAGGCCAACAGCTTTTTGAGAGGGGAAGATTCTACTCGAAGGAGTTGATTGAGGATATTGCATCCCATTTCCATGCGAAGTGCTGTTATGAT GGGGATGGTTATCCCTCTGCTGAATATGGACTGCTCAAAGGGTGTTTTTTTCATGGCTTGGATCCATATGAAGAGATGGTGCATTCAATTTCCACCAGAG AAATACTTGTGCGTTCTTCGAGAGGATTGTCTGAACCGGGAACGCTATTCAAGAACTTGATGGCCATTCTCCGTGATGTTGTGGTTTGCTATGATGGGAC AGTACGAAATGTTAGCAGCAATTCAGTCATCCAGTTTGAGTATGGGATACAAGCAGGAGATACAACTCAACACTTATTCCCATCTGGCGAGCCTGTAGGT GTCTTAGCTGCAACTTCTATGTCAAATCCTGCATATAAGGCTGTCCTTGATGCTAGTCCAAGCAGCACTTCTTCATGGGAGTTGATGAAGGAAATATTAC TTTGCAAGGCCAATTTTCGGAATGAACTCATAGACCGTCGTGTGATTTTGTATTTTAATGACTGCTGTTGTGGAAGGAGTTATTGCAAAGAACATGCAGC ATATGTAGTCAAAAATCAATTGACAAAAGTCACTCTCAAGGACATGGCAGTAGAGTTCATCATTGAATATCAACAGCAGCGAACTTGCAAGGACACTGAA ATTGATGCTGGGCTTGTTGGCCATATTCATCTAGATGAGACTATGTTAAAGAAGCTAAAGATCAATATGGATGATGTTTTGCAAAGATGCCAGGAAAGAC TTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGATTGAACTGGATTCCAGTGAGTCTTGCTATTGTACACATCCTTCTGCACCGTG TGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAAC
• Tissue: flowers
• Gene name: LI_gene_81048;
• Additional information: details;

Expression of Ll_transcript_38971

FPKM

• FPAB: 0
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0.1
• LF3: 0.4
• LF4: 0.3
• UF1: 0.1
• UF2: 0.3
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_38971

• Blastp: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 60.51% of identity
• Blastx: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 60.55% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT2G40030)
• CantataDB: Link to cantataDB annotations (CNT0000674)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449371.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;