Ll_transcript_38981

• Id Trinity: FTRINITY_DN58903_c0_g2_i8
• Name Transcript: Ll_transcript_38981
• Sequence: CAAAATTGTCCATTTCTAATTTTTTGTTAAAATAAATTAAAATCCAAAATCACTTTCATTTCTCACTCTCTCGCTCACACTTATTTCGTTTACTTCTCAA AACCCTCTCTTCAGATTCAGAGAGAAAACACACAACCTTCGAATCGGGTTTTGTGTTCAGCTCAGTGAAACGCTTAGAGGACGCGATTTTTTGCTGTTGA GGATTCTTTTAAAGTTATGGAGGATAATCCCCCTTCAAATTTTTTGGATGGGGAGGTCGTCGGAATAAGATTTGGCATGGCTACACGCCAGGAAATTTGT ACAGCGTCCATTAGTGACTCTGCAATTAGTCATGCTAGTCAGCTGTCAAATCCTTTTCTTGGCCTTCCCCTTGAATTTGGAAGATGTGAATCATGTGGTG CTTCTGAAGCTGGGAAATGTGAAGGCCACTTTGGTTATATTGAACTACCTGTTCCAATATACCATCCAAGCCATGTCAGTGAATTGAAGCGGATGCTGAG CCTGGTTTGTTTAAACTGCTTGAAAATGAAAAAAACCAAGTTTCCAGCATCAAACAGTGGTGTAGCACAGAGACTATTACCTTCCTGTTGTCCGGACACT AATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAACCGATGGGGCTTGTTATTTGACACTAAAGGTGTCAAAGTCGAAGATGCAGCCTAGTTTTTGGA GCTTCTTAGAAAAATATGGCTATCGATATGAGGGTTCAAATATTCGAGCTTTGCTTCCTTGTGAGGCAAAGGAGATTATTAAGAGAATTTCTCATGAGAC CAAGAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGCTATGTTTTGAAGTCTCTTCCTGTACCACCAAACTGCTTATCAGTGCCAGTGGCTTCA GATGGCATCAGTGTCATGTCTTCGGACCCTTCCATAACAATTCTCAGAAGATTGCTCAGGAAGGTTGAAGTAATCAGAAGCTCTAGATCTGGTGAACCAA ACTTTGAGTCTCATCAAATAGAAGCAAATGAATTGCAGTCAGTTTTTGATCAGTATCTTCAAGTAAGGGGCACTTCTAAGGCAGCCCGGGATATAGAAAC TCATTATGGGGTCAATAAAGAGCTCAATGAATCATCAACAAAAGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAGGTTTCTCTTCT CGCAGTGTTATCACTGGAGATGCCTACAAGAAAATTAATGAAGTTGGAATTCCGGTTGAAGTAGCCCAAAAGATTACCTTTGAGGAAAGAGTTAATATTC ATAACTTGAGCTATCTGCAAAAGTTAGTTGACGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTAAGGGAAGGCTCAAAGGGCCA CATTTATCTTAAGCCGGGTCAGATAGTCCATCGGAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAACACTCGTTACAG GCACTGCAAGTTTACATCCATGATGACCATACTGTCAAAATTAATCCTCTCATTTGTGGGCCCCTTGGGGCTGATTTTGATGGAGACTGTGTCCATCTAT TTTACCCACAGTCACTTGCTGCTAAAGCTGAGGTGTTGGAACTATTCGCCGTGGAGAAACAGCTGCTAAGTTCTCACAGTGGTAATCTGAACCTACAACT GACTTCTGATTCACTATTGTCACTGAAGATGCTGTTCAAGACTTGTATTTTGGATAGAGTGGCAGCTCATAGATTGGCTATGTTTCTTACCCATCCATTG CCTAGGCCTGCCGTGCTCAAAGCCAATTCTGGTGACGCTTGGACTGCCATGCAACTTTTACAGTGTGCACTGCCCTCTTCTTTTGATTGTGCTGGAGGCC GTTACTTGATTAGCCATAGTGATATTGTGGAGTTTGATTTCAGTAGGGATCTTCTGCCAACTATGATAAATGAAATCGCAGCCTCAATTTTCTTTTCAAA AGGACCTCAGGAAGCACTAAAATTTTTTGACGTTATTCAGCCCTTTTTGATGGAGAACATATTTGCTGATGGGTTTAGCGTTGGTCTTCAGGATTTCTCG ATATCCCGGGCGCGGAAAAGAATTATTAATAGAAGCATTGCGAAAGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGCTGGTGGCACAAC AACTGGAAAAGCACATTGAAGATGTTGAAAAACCTGTTATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAAAGTAAGTCGGC CATTGACAAGGTGGTTCAACAAATGGGGTTCTTAGGCCAACAGCTTTTTGAAAGGGGAAGATTCTACTCAAGGGAGTTGATTGAGGATATTGCATCCCAT TTCCACACGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAATATGGGCTGCTTAAAGGATGTTTTTTTCACGGCTTGGATCCATATGAAGAGA TGGTGCATTCAATTTCCACCAGAGAAATACTTGTGCGTTCTTCGAGAGGATTGTCTGAACCGGGAACGCTATTCAAGAACTTGATGGCCATTCTCCGTGA TGTTGTGGTTTGCTATGATGGGACAGTACGAAATGTTAGCAGCAATTCAGTCATCCAGTTTGAGTATGGGATACAAGCAGGAGATACAACTCAACACTTA TTCCCATCTGGCGAGCCTGTAGGTGTCTTAGCTGCAACTTCTATGTCAAATCCTGCATATAAGGCTGTCCTTGATGCTAGTCCAAGCAGCACTTCTTCAT GGGAGTTGATGAAGGAAATATTACTTTGCAAGGCCAATTTTCGGAATGAACTCATAGACCGTCGTGTGATTTTGTATTTTAATGACTGCTGTTGTGGAAG GAGTTATTGCAAAGAACATGCAGCATATGTAGTCAAAAATCAATTGACAAAAGTCACTCTCAAGGACATGGCAGTAGAGTTCATCATTGAATATCAACAG CAGCGAACTTGCAAGGACACTGAAATTGATGCTGGGCTTGTTGGCCATATTCATCTAGATGAGACTATGTTAAAGAAGCTAAAGATCAATATGGATGATG TTTTGCAAAGATGCCAGGAAAGACTTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGATTGAACTGGATTCCAGTGAGTCTTGCTA TTGTACACATCCTTCTGCACCGTGTGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAACTGCAAACATCATGTCTGACATAATTTGC CCGGTTTTGTTAGAGACAGTAGTCAAAGGAGATCCACGTATAAGCTCTGCAAATATAATCTGGGTTAATCCAGATACAAACACATGGGTCCGAAACCCCT CCAAATCTCCAAAGGGTGAATTGGCTCTAGATGTCATTCTCGACAAGGCAGCTGTGAAACAAAGTGGCGATGCTTGGAGGATTGTCCATGACTCATGCCT TCCTATCCTTCATTTGATTGATACAAGACGGTCAATCCCTTATGCTATTAAGCAAATTCAAGAGTTACTTGGAATCTCATGTACATTTGCTCAAGCAATT CAGCGTCTTGCCACGTCAGTAAAAATGGTTTCCAAAGGTCTCCTTAGAGAGCATCTCATTCTCTTAGCAAGTAGCATGACTTGTGGTGGGAATTTGGTGG GCTTTAACACTGGAGGATATAAAGCACTGGCACGACAACTAAACATCCAAGTACCATTTACTGATGCGACACTGTTTACACCTCGAAAATGTTTTGAGCG AGCTGCTGAAAAGTTCCATACAGATTCTTTATCAAGCGTAGTTGCCTCCTGTTCATGGGGTAAACATGTGGCTGTGGGTACAGGTTCAAAATTTGATGTC GTATGGAATGCGAAAGAGATAAAGTCCAGCGAGAATAGAGGGATGGATGTATACAATTTTCTTTATATGGTGAAAGACTTCACCAGTGGAGAAGAAGAAA AAAATACTTGTTTAGGTCAAGACATTGATGATCTGCTAGACGATGAAAATATGGATTGGGGCATGTCTCCCCAACACACGTCTGGTTTTGATGATGCAGT CTTTGAGGAGAACTCTGAACTACCAAATGCTTCAACTTCCAATGGTTGGGGATCAAATAAAGCTGAAGGTGCATCTGAAAATGCCAAGGAGGATTCTTGG AGTTCTGGAAAGCAGAAAACTGATGTTGTCCAAGAAGACTCTTCTAGGTCCAATGCTTGGGATGCCAATACAAAGAAAACAGAGACGAAGTCTAATGATT GGTTGGCCTGGGGAGGTAACAAATCTGAAACTCAAGATGGCAGTTCTGATACAGCCCAAGAGGATTCTTGGAGCTCTGGTCAGAGGAAAGCTAATGTTAC CCAAGTAGATGCTCCTAAGTCTGGTACTTGGGATGCAGACACCAACCAAACAAAAGCAAAGTCAAATGATTGGACGGCATGGGGAGACAAGAAATCTGAA ATACAAGATGTCGGGTTTAAAAGAGCAGAAGAGGATTCTTGGAGCTCTGGTAATAGGAAAGCCAATGTTGCCCAAGAAGACTCTTCTAAGCCCGGTGCAT GGGATACTAACACCGACCAAACAAAAACAAAGTCGAATGATTGGTTGGACTGGGGTGGAAAGAAATCTGAAATTCAAGATGGTGGGTCCGGACGAGACCA AGAGGATTCTTGGAACTCTGGTCAGAGGAAAGCTAGTGTTATCCAAGATGACTCTTCTAAGCCTGGTGCTTGGGATGCAAAAGCCAACCAAGCAAAAACA ACATCAAATGAGTGGTCAGGGTGGGGAGGAAAGAAATCTGAAGTGCAAGGTGGTGGGTTTGAAAGATCCCAAGAGGATTTTGGGAGCTCCCGGAAGTGGA ATGCTGAATCTAAGGTTGGATCCAAAGTTATCCAAGAAGAAGCATCAAGGTCTAATGCTTGGGATGCAAATACAGACCCGAAAAAAACGAAGTCAAATGA TTGGTCTGCTTGGGGAAGTAAAGGTGAAATACAAGATAGCAGGTCAGAAAGATCCCAAGAGGATTCTTGGGGCTCTGCTAAGTTGAAAGCGGAATCAAAT GTTGGAGCTGATGTTAGACAAAAAGACTCTTCTAGGTCTAATGCTTGGGAAAGTAATTTCAACAAATCCTCAGAAAACCCAGCATGGGGTTCCCAAAATG AGTCAAATCAAGCTGCAAGTTCCCAAGGATGGGACTCACAAATCGCTTCTGCAAATTCTGGCCGTGACAAAAACTTTCAATGGGGAAAATCCAAATCCTC AGAAAGCCAATCATGGGATTCCCAAAATGAGTCAAATCAGGCTGCAAGTTCTCAAGGATGGGACTCACAAGTCGCTTCAGCTAATTCTGACAGTGACAAA AGCTTTCAATGGGGAAAGCAGGGCAGAGAATCATTCAAGAAAAACCGCTTTGAAGGTTCGCAAGGACGCGGTTCAAATGCAGGTGACTGGAGAAATATGA ATCGCCCCCCCAGACCACCACCTCCAATGTACACACCCGAGGAACAGGAAGTTCGTAAGGATATTGATTCTATTATGCAGTCAATCAGACGTATCATGCA ACAAGAAGGGTACAATGATGGGGATCCGCTAGCAGCAGAGGATCAAGCATTTGTGCTTGAGAATGTCTTTGAACACCATCCAGATAAGGAAACCAAAATG GGTGATGGAATTGATTATGTCATGGTTAGCAGACACAGCAATTTTCAGGAAAGTAGATGCATGTACGTGGTTTTAAAGAATGGTAAAAAGGAGGACTTTT CCTACAGGAAGTGCCTGGAAAACCTAGTACGGAAGAAGTATCCAGACGTTGCAGAATCGTTCAACGACAAGCATTTCCGGAAACCTCGTGGAAGAGCAGG AGGGGACCAGGCCACAACAACTCCATTGCCTACTTCTACTGAAACAAACCAGGCACCAAGAACTCCATTGCCTACTTCTACTGAAACAAACCAGGCTCCA ACATCATCATGGCCTACTTCTACT
• Tissue: flowers
• Gene name: LI_gene_81048;
• Additional information: details;

Expression of Ll_transcript_38981

FPKM

• FPAB: 1.3
• FPNAB: 2
• LF1: 1.5
• LF2: 2
• LF3: 1.4
• LF4: 1.1
• UF1: 1.5
• UF2: 1.7
• UF3: 1.6
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_38981

• Blastp: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 48.05% of identity
• Blastx: DNA-directed RNA polymerase V subunit 1 from Arabidopsis with 51.58% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT2G40030)
• CantataDB: Link to cantataDB annotations (CNT0000674)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449371.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;