Id Trinity | FTRINITY_DN58909_c1_g1_i1 |
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Name Transcript | Ll_transcript_37624 |
Sequence | CTACAACTACCACAGTACCACACAACTACACAAATCAATCTTCAAAAAACACATTCAGAACCCAGTGCTCATTTCTCATGGCTTCTCCATTTCACACATG TTATTGCTACCATTATTTTCAACCTTGTACTCTAAATAACCCTCTTTTCACCACAAACAATAACAAAAATCCTAACACTATTAGCATCCAACGAGGTTAT AATAAACTACCACATGTTCTAGCTACACTCTCATCCTCTGCCACTAACTCTTCACATCAAAAAACAACAACTAATTACCTAGACTTTTATGACATTTATG ACAGGGCCACAAGGTTTAGGATCAATGGTCTTGTTCATAGGATTACATCATTATCTTCCAACAACAACAAAACTGAGATACTAAAAATCTTGGAGAAAGA AAATGTTGACTTTAGAAATAAAACCATATCAGATTTCAATCACCTTCTCATGGCTCTAATCATTGCACAAGAGCATGACTTGTGTTTAAAACTCTTTACA AATTTACAATCTTTTCAACAACTTGTCCCTGATTGTACAACTTACTCCATCATGGTAAGGTGTTACTGCAAGAAAAATGATCTAGATGAAGCTAAGAAAG CATTAGACACTATTTTGGTAAAAGGGTATAAACCAAATGATGCAACAGTCACTGTTCTTGTTAATTCCCTTTGCAAAAGGGGGAAGATTAAGAAGGCTAT GGAGGTTTTCGAGGTTGTGGGGTCAAAGGGTGTTAAGGTATATAATTGTTTGTTGAAGGGTTTGTGTTATGTGGGAAAGGTTGAAGAAGCATTGGAGTGT TTGATGAGTATGAAGGAAAAAAAGTTAAAAAACCAATTTTTGGAACCTGATGTTTATTCTTATACTGCAGTAATGGATGGGTTATGCAAAGTTGGTAGAT CAGATGAGGCAATGGGGTTGTTGAATGAAGCTGTGGAAATGGGTCTTGTACTTAATGTGGTTACTTTCAACACATTGATACAAGGGTATTCTAGGGAGGG AAGGCCAATGGAGTGTGTTGCTGTGTTGAAATTGATGAAGAAACATGGGTGTGTTGCTAATTATGTTAATTACAGCACTGTGTTACATGGTTTGTTGAAA TGGAATAAAGTAAAAGGTGCACTTGGGATTTATAAGGAGATGGTTGGGCTTGGTTTTGAAGTGGATGTGAGGATGATGGGGACTTTGGTGAGGCGTTTAT GTAAAAAAGGTCTAATTCATGATGCAGAGGAGGTGTTTGAGAAAATGCTTGAGAAGGGGTTAATGGTTGACCAGAGGACATTTGAGGTAATAGTTCAGGT GCTGTGTGGAAGAAAGAAGATTGACGAGGCATTGGGAAAGTTGAATTATATGGTTACATTGGGGTATTTTCCAAGTGTGATTATGTTTGACAAAGTGATT CAATGCCTTTGTGCTCAGGGAAGGGTGGAGGAAGGAGTTTCAACTTTGCTTCTTTTGCATGCAAATGGAAGGGTTGCTAATAGAATTACTTATGATGTAT TGATCAAAGAGTTTAATGCACAGGGGAGATTGGTTTTTGCTTCCATTTTGTTTAGTTTTGCATTGAAGCAAGGTGTTGTCCCCAACAGAGAATCTCTGCT ATGTAAGGTCCCATTTGTTTAAGTTTTTTCTTTCTTTTTCATAGAAAAAGTGACTGTTTTGATTAAAGAAAGGTCAATCCAGAGAGACTTGCACATTTGT TTAGTTGTGCTTCTGAAAAAACAGGAACTTAGCTCTGTTGTCTCATATCCTAGGACAGATGTTACATTTTCCGAAACAGTATATCATTCTATTTGTTCTG AGCCAATCAGAATATTATTTGTTTTTAAAAAAATTATTA BLAST |
Tissue | flowers |
Gene name | LI_gene_81102; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_37624
Blastp | Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial from Arabidopsis with 31.65% of identity |
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Blastx | Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial from Arabidopsis with 31.65% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT3G16710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416406.1) |
Pfam | PPR repeat (PF12854.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |