| Id Trinity | FTRINITY_DN58920_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_37987 |
| Sequence | TTGGTAACACCTCCACCACCCTTCTTATCCATAACCACACAGAGCAAGAAGAACAACAAGAACAAGAACAAGAAGAAGCGAACTTTGAGGAATTTCATTC ACTTCTCCCTTAAGAGAGGATTTGGTAACACTGCTCATAAACTAAACAACCTTCTATGGCTTCGCAATCTCGAAGACCCTCTTGCTTCTCCCTTTTCTCT ACCTTCCTTCCCTCAACCATGCTACCCAGGACTAACTGGAGTAGATTTGCTCATATCTGATCTTAAGGCATTGGAAGCATATGCTAGCTACTTCTATTAT TTCTCTAAGATTTGGTCTATGCCACTTCCTCAAGTTTATGATCCTCAACATGTTGCTCACTATTTCAGTGCCAGACCCCATCTTGTGGCCCTTCGTATTC TAGAGGTATTTTCCTCCTTCACTTCTGCCATGATCAATATTCGAACTTCGGAGTTTAGGAAGTTTCTAGGACTAAATCCAGAAGAGGACGTGGATGATAA AACATCACAATATAATTTTGGGATGGTGTTAAAGGAAACAATGCTTAATCTTGGTCCCACTTTTATAAAAGGTGAGGGATTTTGATATATTTGACATCTT TACTATAATAGCTAAACTAAATTCTTATTATCATTTCATTATTATGCTTTATCTTGTTTTACAATTCCCATTGCTTTAAAAGATTTTGTTGGGGCTTTTA TATCTTTCCTGCAATCACATGATTATCAGCATCCTTGTTACATTCATTTGATTGGTGATGCAGTTGGTCAGTCCCTTTCCACAAGGCCAGATATTATTGG CATTGAGATGTCTAAGGTTAGATTGAAAACTCTGTATGTAATGCTACTTCTTGTTAGATGATGATAATATATGGTTATATATCAAATTTATTGGCTTTGG AGCTTTAAATATGTTCATAAGCAATAATACTAATTTGCATGGCAAGGGTATTTGCGTTTCTTTCCCGTGGCTTCTACTATCTCTGTTTGTTCAGATGAAA CTTTTGGTAAATATATTATAACCTATTGAATATCATCTGAACTCTAATTTTTATTATTTTTCAGAACTGTCTATAGCATATTACATTTGGGGCATGATTG TAATGCCACTAACAGTTGAGTAGCTGGACTGGAAATTTATGTCTATATATTTTGGTTGTGTTCTTCTTGCAGGCACTGTCTGGACTGAATGATCAAATCC CTCCTTTTCCCAGAGCTGTTGCTATGAAGATTATAGAGGAAGAGTTAGGTTCTCCTTTGGAGTCATTCTTCAGTTACATTTCCGAGGATCCTATAGCTGC TGCGTCATTTGGTCAGGTTTACTTTGCCCGTACTATAGATGGTATTGACGTTGCTGTAAAAGTTCAGCGTCCTAATTTGCGTCATGTGGTGGTGCGGGAC ATCTACATCCTCCGTCTTGGGTTGGGGTTGCTGCACAATATTGCAAACAGAAAGAGTGATCCTCGTGTATATGCTGATGAGCTTGGGAAAGGTTTTGTTG GTGAATTGGATTATACTTTAGAGGCTGCAAATGCTTCAAAGTTTCAGGAAGTTCACTCCCCCTTTTCTTTCATTCGTGTGCCTAAAATATATCCACAGTT AAGTCGAAAGAGAGTTCTGACCATGGAGTGGATGGTTGGTGAAAGTCCAACAGATTTGCTTTCTTTATCTACTGGAAACTCTATCGGAAATGTCTCTGAA TATTCAGAAAAGCAGAAAGTAGATGCAAAAAAGCGTCTTCTTGATCTGGTATGTAAACAAAAAAAGCATTTATCCATATTGTATATCTTGAATGTTAGAA ATATCCTGACTATTACTGTAGGAGCCAATTGAACTATTCACAATAAATATAATTGATGTTTTGCAGTAGAATAAAAAGAAAAGTATGAGTGAGCAACCAG GGAAATTTTGGCCTTCTGATGCTAAAGAGACTCAATAACAAAATAATAAATATGGCTCTGGGTTGACTCAGTAGTAAAATTTCATCATCAATCTTTCATT AGCTTATTCGACTTTCTTGCTCAACTGGAAAGTTTTCATAAATTAAGAATTATTGATTCTACTGAGACTTTGTTCTGTTTGGTTTCTGAGGCTATTATGA AAGCATCATATTCAATGAATGGGCACTTATGTCACTTTGAGTAATTCAGGTCAACAAAGGTGTTGAAGCAACACTGGTGCAACTTCTTGAAACAGGCTTA TTACATGCTGATCCACATGCGGGTAACTTGCGTTACATCTCCTCAGGACAAATAGGGTTTCTAGATTTTGGTTTGCTTTGTCAAATGGAAAAAAAGCATC AATTTGCTATGCTGGCTTCAATAGTCCATATAGTAAATGGTGACTGGGCATCCCTTGTCCGTGCTCTGATTGATATGGATGTTGTGAGGCCAGGGACAAA TATCCGACTTGTTACCCAGGAGCTGGAACATGCCTTGGGAGAAGTAGAATTTAAAGAAGGAATTCCTGATGTCAAGTTCAGCAGGGTGAGAGTCATCTTT TGACAAGCAGTAATTTAGTATACGTATTTCAGGTGACGGTGCAAACCATTGTGTATTAGTGTTAAGGGATGGCAATGATAGCATTTCTGACTAATTTTTG GACTAATGATAACTGAAATATAAATATAGAATGTACTAGTCACTATCTGAAAATAACAACAATTGAGTAAACACCGTTTCTAAAACTGAAATCACCTCAA CCAAAGTTCAAAGTGTGTGAAATATCCAAAACCAACCACATTGGAATTGGATATGTCTATAGCTAGACTGAGTATGGATATTCACATAATCAATCATCTC CTTGGATGAATATTGGTAGTTATATAGAAGGCTGTCTTCACCTACAACTTTTTTCAACAGAAATGGTATCAAAGAAATTCAAATTATGTATATATATTCT GTGTCAGGTGTACTAAGGTTAAAAGTAATGGAAGTTAACCATAATCAAACTGGTGATGCTTTTTTGGGCATTGAAACTGATATGTTCAAACAGTATTTCT ATTTTGCAGTTCTCTCTCAATAAATATGTCTTTTATGATAGATAATCAGATTAACTAATTGTTTTGTCTATTTTATTGAGATTCCTACTTCTACCTATTG TGTAAACACAAACAAGTTCCATTTGAATGCATGCATATTATGAAGGGTGCTTTTGCAGTATTGTTTGATGAGCTTTTAAAAACTCCGGTCTTTCTTGTTT CGGATGAGTGGAACAATATTAACTACATTTTGTAAAGTCGTGGTTTTATAGATAGAAAAAAAGTCATGTTTGTATGGTGTCAAATGCATTATCCATATAC CACTTTGCTGAATCAACATTTTCAAATGTAACCTGCTGGTTTAGTTTAAGCCTGATCGGCATTTTCTACTCCGTTAGAACTTGTTCCAACTCTCATCCCA CTTTTAAAGGAAAGGAAAAATTAGGAGATGAGACATTTTGACCTCATTATTTTCTTTCCCTTCCCCTTCCCTCTAGTCCTCTCGAACCAAACACATGGAA TTTCTGAATTTATTAATTATTTATTCTGGAAGCTTTCTTCTCCAGTTACTGAAATTTTCAATAAATTTTCTCCAAGGTTCTGGGAAAGATTTGGTCGGTA GCACTCAAGCACCATTTCCGTATGCCACCATATTATACACTTGTCTTACGATCCCTAGCTTCCTTTGAAGGCTTGGCTATAGCTGCAGATAAAAACTTCA AGACTTTTGAAGCTGCATACCCTTATGTTGTTCGGAAACTTCTCACAGAAAACTCAGCTGCAACAAAGAATATATTGCATTCGGTACCACAAGCCCTTTA ACAATAAGCTCTGTGCAAACAGTCCACAAAAATGTAACATGATATCATGTTTTTGCACTTGTTTGCTGATTTTAAGTCTAGAAATAGATCCTAAGGCCCT TATCGTAAGAAATTTTTAAGTGATTTAATTATACTTTTTGGTGTGTCTCATCGAACGATTCATATTAGTTTTGCATTCTCATCGACGTGAGCTATCACAC ATGATACTGATGGATTTCTATCGTATCCATTAGCAATGTTTCTACTCAATCTAGATTTGTCTAAATATAGTATCAATGTTTCATTCTCCTTAAACTTAAA TTGTGAAGTATCAATTAGTATTCCTCCTCTCTCTCTCTCTCTTTTAAAACTTTATTCTCTCTTTTTAGGCGCTTCTAAACAGAAAGAAGGAGTTCCAGTG GCAAAGGCTTTCCCTATTCTTGAGGATAGGGGCAACTAGGTATGTGAAAATGGCATCTTAGGAAGTGTCTTATCCAGGTAGTCCTTTTTTAGGTCTGAAC CCTCGATGTTCAAAAGTCACATTGAATTTCAATTAATCCGAGTCAAGATAGGAGGACCCAACACCTATTTATTTCATTCACAAGACTTGAACTCGATATA TCTTTTAAGGGGAACCAAACTCGTACTACTCGGCATAATAGTTGCTCATGTCCATGTTCTTTTCTATCTTCTATATTTTGAATGACTTTTTTTTTAATTC TAATTACATTTTTTTAGAAAAAGTTTAGTCCTTTTTTGATGAAGTGTCTGTTATTATATCATGAAAACTCCAAATCCTTTTCTAAAAATAGTCACCTAGG TAGGATCTGCAAACCTAGTGCCTAATACTGTAAATTTCACTTTTGTCACACACAAGCTGAACAAGAAACATTCGTCAGTGATTTGCTTTGGCATGGACTT CCTCATTTGGGCATTAGGATTGCCTCTTTGAGTTATCTATTATTACTTGATGAGTTGCTATCATTTAACTGCTGTAAGTATAACCTCTCATGCTTCTGAT GCTTTGTCAGGAAAAACTTGCAACTAGTAGCATCAAATACTTCCCCGGATCATTTACCAAATAAGGGTACTGACATGTTTGATGTTGCATACTTAGTCTT GAGGCTTTTACCATCCAAGGATGGTGCTGCTCTTAGAAGACTTCTCATGACTGCTGATGGAGCTTCATTAATCAAAGCAATGGTCTCAAAGGAGGGGAAG TTTTATCGCGAACAGCTTTGCAAGATCATAGCTGACACTCTGTACCAATGGATGATTAAAGCTAGTCAGAATTCGAGGGTGATATTAGCCGATGGACGTG GTGATAGAGAATCAGATCAATCCTCTAGGTCATCCTTGCCTGCATATGATTATAATTCTATCTTTAGAGATCGGCGACTTAGGGTGATATTCTCTCATGT TCTCAAATCTGCAAGTAGAGATAAAATATTGATGCTGCGGTTATGCTGGGCTTCTCTTCTTCTAATTATTAAAGCTTCAAGTTTGGCTTGCCACCAGGCT ATTGTGTCTCTGTCTGAAGCTTACATGGGCCAAATATTTGATGCTCCTAAGAGATATGCAGTCACTACATAACATTTACTTAGAAAGTTAGAACATATTA GTTTTCTCAAGTACAAGAGTGCATTAAGAGTGCATTCTTATCCAACAATTTCCAAAGAAAACAAGAACAAAGGTCTATCTATTTACATGGATAGCAAGAG TGAACCCATTTATTCCTTGCAAACAAAGCACTTGTGGTCTTAAGTTCAGTGTTTTGGTTTCAGGTGGGTGAAATATAGTTATAGAATTGTCATGTGTTTT AATTCACAGTTTCTGTACATGGGGAAATGTTGTACACTATAGTTTCATGTAAAGTGATAAAGTTACTTTTTGCAGAGTATAGATGCCATTGATTACTGAT CTATGCATCAGTCCCAAGCAGATATTTACATGCACTTACTTGACTTTTTTAACAAAGTGATCAGTTTTAGGATGATGATGAAATCTTTTATAGAAATACT GAATGTTTCAGAAGATCAATAAGTGAAAAGATAAATGATGTTCCCTTGGTTTGGTGTTCCTTCATCAATTAAGTGGAACTGAAATGAGTATTTTTCCATT TCATCCCTTCCAAAATTCTCAAAAACGATGATGTCTTAGTTGACATTCTATCATTTAGTTATATATATTTGTAATCGATTCTCTTTATGTATATAATATA GATAAAGTGACATTGCAACATACATTACTCTTGTAGTTTTGTTCTTCTTCACACTTTCCACTCTCTTTCTATTCTCTAAAACTGAATTCCTTCATGAGCA CGCCGCCGCTTTCACGGGTACTTCTATCTCTCATTCTCTCATCTTAGGATTCAGATTTTATTACTATGAGTTGAGTTGATTTGTCTGAGTTTTCAATAAT TTGAATGGCATTTGCAGGGCATGAAAATGTTGGAATTGAGTGGAATGACTCATCTCTGCAAGGGTCTTGTAGTGGTGCTGGTTACTGCTTACATTCTCAT TCACCTTTTCCCTTCAGCTCTCACCTACCTTGCTCTAGTTCCTGCCATGTATCTCTCTCTATAACCCAATCACTACTTTTATTACTACTATAAATATCTG CATTCTAGAGAACAGAACCATTGTGTTCTGTTTTCTTTTGTTTGTTTGTGGTTTTATACTATTTGACCCCGATCCAATTACTTTGATCTTGTACTCTTGC AATGCTCTAGTTATATGCCACTTTCTGGATTTCATGGAGTTATATCCGGCTTCTTGGTCGGCATCAAGCAAATCATACCAGATCAAGAGCTTCCTTTCCT CAAAATGAAAATGAAGTGGTTACCATCTATCACTTTATTATGCTTAATTGCTATGAGCTTCTGGACACTAAAGGCAATGCCATATCTTCCAAATATGATA TTTGGCACATATATGAGCTGGATTTACCTTAGGTACTGGCAGAATATAGCAGAAACAAAGCATAGGGGTGACCCAAGTGAGGATTTCAGATTCTCTACAT TTTTTCCAGAGTTTTTAAGGTAAGTTATGGTTTTAGACATGGTTTTTTATGTCATGTGATGATAAATTATAAGCTCTAATTTATCATTGGTGTGCTTTTT TTAGTTAGATGTACATATTGTAAATTAAAAATTAATACTAAGAACAAATTTATATGGAAACTATCAAATTAATAAACAATAAAAAAACTGCAATGGATTG CTACAGGAGAAACAATTATCAGCCCGATATGGGCTAATCCGAATCCGTCTGGGTAGCCCGTTTTGACACCTCAATCTTTGAGTTTTAATAATAAGATAAG ATGAATAATCATAACTGTCATAGAGTTGTTGTAGTAGTAGTAGTTACACCAAACTACTTACTGTTGTGACTGCTGCTTTTGTTGAAGAGAGAAAGGTGCC CAAGCACTGGAAGAAAGATTAGCTGTTGCACAGATTGCATGAGAGTTGCAAAAGGATGCTACAGAAAATGTATGATTCCATAGCTTTTGTAAACGCAGAA TAGTTTGGTCACTATGAACATTCTAAGAGTTTGTGTCTGTGATCCTTATGAAACTGAAAGTTTCTTGTGTTAGATAATGGAAATAATTGTTATATAGTTG TCAAAAGGAAAGGTTGAGTTCAAATGGATTGGTGTCGATACTTTCTTCGGCAATTTTTAGAATGTAAATATGTTAGTATTTTGTTGTGAGTGAGACACCA CCTCAACCTCCTTCACTCTAATCATCAAACTACCTâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_81215; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_37987
| Blastp | Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic from Arabidopsis with 43.54% of identity |
|---|---|
| Blastx | Rhomboid-like protein 19 from Arabidopsis with 54.11% of identity |
| Eggnog | Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661) |
| Kegg | Link to kegg annotations (AT4G31390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427497.1) |
| Pfam | ABC1 family (PF03109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |