Ll_transcript_39170

• Id Trinity: FTRINITY_DN58926_c0_g2_i7
• Name Transcript: Ll_transcript_39170
• Sequence: AGCAGTCGCTGTAATGGAATGGAGCAAAAATCTTTACTCAATATAAATTTCTCACACCTACCTCACAAGTCACACCCATTATTGCTATTATTTCATCTCT TTCACTCTACTTCTTCTATTTCAGGGGTCAATCACTTACTTCTCTCTCTCTCTCTCTATATATATATATATATGTATATATATATGCAACCCATTACTCT TGTTTTTCTAAAGATCGCAACTTTACATCTGGGTGGTCAGAATCTCAATTGCTATCTTTTACTCTCTTTGTTCCACTTATTCAATATCTTTCTTTCAAGT ATTGCTACTCTATAAATTTTGATTGTTATTTAATCATGTTCATGCATAGGGGGTTCTCAATTTTCAATTCATGCTTCATTTTCTTATAATTCAAATCTTT GCAGGTCTGAGTTATTTGTGAAGGGAAATGAGAATAATTTGTGTGCAGAGTTTTTGAAATTTATGGTTCATTCTTTTGTAACTGAAGTTTCAAGCTTGGA TTATTTTGTCATAGATACTCTCTAACACCACCTGCTAACATCAAACACACATAGAAAGTGAAATTGTGGAATGCTTCGAGTGCCATGTGATTGGGACTGA ATGTTGGACGATAATGTCAACTACAGAATAAACTCGATGTAGTAGAGATGAAACTATTGTGTTGGATGAGTGGCTGGACAAGATAAGATTAATAATGAAA GCATTAGAGAAAAGATTGGAGTAGCTCCTTTTATAGAAATGATGATAGAGTTGTGTCGGTGTAGACATGTATGGAGGAGATCATTAGAAGCCGTAGTAAA GAGAGTAGATCAAATAGAGGTCAACCCAATTTATAGAGACAAAGGGAGGCCAAAACAAATCATGGGCTAAACGATTACAAAATACTTAGAAAGTGATGCT TTGTCAACGGACATGATTTATGACATAGCATTATGGTGTCATTCGATCCATGTAGTTGACCCACCTAATGAGGCCAAGGTTTGATTTTTGGTTGTTGAGT TGTTATATGTTTGTGGCCACGGTTGATTGGTAAATGGAATTGTCTGTCAATCATGCATATGAAGTTCTGAAATTTCAATTTATGATTTTCATTTTGTATA ATTGGAATATTTGTAGGTGTGATTTAGGAAGGGAAATGTGAAGAACTTGCTAAGTTTGAAAAAGAGTTGGTCTTTTTTTTTTGCTGTGAACTTTCTTATG ATGGAGTTCCCTACCGTTCCTCATTTGACGCGAGTCTGCACCCTTCTGTTGCTTATACTACTAATGAAGAGTGATATTGCCGTATATTCCAATTCTGATT ACTTGATCGGTCTTGGAAGCTATGATATAACGGGTCCTGCAGCTGATGTTAACATGATGGGGTATGCTAACCCAGAACAAGTTGCATCTGGTGTTCACTT AAGGCTGCGGTCTCGCGCTTTCATTGTTGCCGAACCACATGGTGACCGCGTAGTGTTTGTGAATCTTGATGCTTGTATGGCTTCACAGCTTGTGACTATC AAAGTACTTGAGAGGCTCAAAGCAAGATATGGTGATCTGTATACTGAAAATAATGTAGCTATTAGTGGAGTTCACACTCATGCTGGTCCTGGGGGTTATC TTCAGTATGTTGTTTATATTGTAACGTCTCTTGGATTTGTGCGCCAGTCATTTGATGCCCTTGTTGATGGCATTGAGAAAAGCATTGTCAAAGCCCATGA AAATCTCCGCCCAGGATCAATATTTGTCAATAAGGGAGATCTCTTAGATGCTGGTGTAAATCGAAGTCCTAGTGCTTATCTCAACAATCCTGCTGCAGAG AGAAGCAAATATATGTATAATGTTGATAAAGAAATGACTCTTTTAAAGTTTGTTGAAGATGAACGGGGTCCTGTGGGAAGCTTCAACTGGTTTGCTACTC ACGGAACTTCAATGAGCCGTACAAACTCATTAATTAGTGGTGACAATAAAGGTGCTGCTGCACGACTTATGGAAGACTGGTTCGAGCGAAAAGATTCTGT AAAAATGAACTCTGTTGGATTTGAAGATAATAGCATCCCCCGAAGAATTTCAAACATAATTCCCAGCCTCGGCAATAATCACCATGAATTATTGGAACTT GCTTCCTCATTTCAATCTCCTCCTGGTAGGCCAACATCCAGAACTTCGAGTGTTGCTAGACGTGTGAGAGGTGATCTTAGTCAGGTTGACAAGCCTAGAT TTGTATCTGCATTTTGTCAATCTAATTGTGGTGATGTTAGTCCAAATGTACTTGGAGCTTTTTGTACAGACACTGGACTACCTTGTGACTTCAATCATAG TACATGTGGAGGGAAGAATGAATTATGCTATGGCCGTGGACCTGGTTACCCAGATGAATTTGAAAGTACACGTATTATAGGGGAGAGGCAATTTAGGAAA GCAGTGGATCTGTTCAATGGAGCATCTGAACAAATTAAAGGGAAGGTTGATTATCGACATACCTACATAGATTTCTCCAAGCATGAGGTAACTCTTTCCA AAGGAGGGGCTTCTGAGGTAGTCAAGACATGCCCTGCTGCAATGGGATTTGCATTTGCTGCTGGAACAACAGATGGGCCTGGAGCTTTTGATTTTAAGCA GGGTGATGATAAGGGAAATCCTTTCTGGAACTTGGTCCGCAACGTACTTAAATCACCAAACAAGGAACAAATAGACTGTCAACAGCCTAAGCCCATTTTG CTTGATACTGGTGAAATGAAGTTACCATATGACTGGGCACCCTCAATCCTTCCAATCCAGATCCTCCGAGTTGGGCAGTTTGTTATTCTAAGTGTACCAG GAGAATTTACAACAATGGCTGGAAGGCGTCTTCGTGATGCAGTGAAGGCAGTGTTAAGCGGTAACAATGACTTTGGTAGCAACATTCATGTTGTCTTAGC AGGGTTGACTAATACATATTCACAGTATGTGACTACATACGAAGAGTACCAGGTCCAAAGATATGAGGGTGCTTCCACGTTGTATGGTCCACACACACTG AGTGCATACATTCAAGAGTTCAAGAAGCTAGCTAATGCTCTCATCAGTGACCAACCTGTAGAACCAGGTCCGCAACCACCAGATCTCCTGAACCAGCAAA TAAGCTTACTAACACCGGTGGTGGTGGATGGTACCCCTCTTGGTGTAAATTTTGGAGATGTGAGCATTGATGTACTGAAGAATGCAACCTTCAAGAAAGG GGAGAAGGTGAGTGTTACTTTCTGGTCGGCGTGCCCTCGTAATGACCTCATGACTGAAGGTACATTTGCCCTTGTGGAGTTTCTAGAAGGAAAGGATAGG TGGGTTCCAGCTTATGATGATGACGACTGGTGCTTGCGTTTTATATGGTCGAGACCTTCGAAACTGAGTTCACGTAGTAAAGCCACCATAGAGTGGAGAA TCCCAGAGGATGCAACTCCTGGTGTATACAGAATAAAACATTTTGGTGCTGCAAAGAGCTTGTTAGGATCAATTCGTCATTTTACAGGCTCATCAAGTGC ATTTGTAGTAGCATAGCTAAGGGATAATTATGTTGTGTTCTAAAAGCTATTGCTACACTTGTTGGTTGTTACTCACTCTTGTTGGACTCAATTGTAAGGG ATAATTATGTTGATATATTGATTATGGTGCCACTGTGTAACAGCATTTGCAAACTCCAAAAAGCAGTATGCGTTTGCCGGGAGTCGAACCCGGGTCTATT GCTTGGAAGGCAATTATCCTAACCGTTGGACTACAAACGCATTCATGAAATCATTCATGTGGTCATCAAATCATCATCTGCTTACCTAAAACTTGTGTGA CATGTTTTTTGTTTCTAATTTGAACTCAAAGTTATACACCATTTTTATTCTAAGAGTCTCATATTACAAAAATTCCAACCCGTGCACCCTCCTTTCAATG GCTTCTATTACTTCCATTACAAAGTGGTCCAATTCATCTATTTGTAACTTGTAACTG
• Tissue: flowers
• Gene name: LI_gene_81269;
• Additional information: details;

Expression of Ll_transcript_39170

FPKM

• FPAB: 11.6
• FPNAB: 15.4
• LF1: 17.7
• LF2: 14.3
• LF3: 12.4
• LF4: 11.9
• UF1: 15.9
• UF2: 16.7
• UF3: 11.6
• UF4: 12.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_39170

• Blastp: Neutral ceramidase 1 from Arabidopsis with 76.39% of identity
• Blastx: Neutral ceramidase 1 from Arabidopsis with 77.07% of identity
• Eggnog: Ceramidase(ENOG410XQWE)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460497.1)
• Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal (PF04734.12)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;