Ll_transcript_37842

• Id Trinity: FTRINITY_DN58927_c0_g1_i1
• Name Transcript: Ll_transcript_37842
• Sequence: CACAGTTGTTATATTGAAATAAAAACTTTTTTAATTTTATTATCTCATTTTTTCTTCGTTCTGTTTGCGACAGAATTCGATCTCTTTGCAGATCATCTCT GCGGATCTTTCAATAACGAATCTCAATCTCGCAGTCACTTATCTCCGATTCGATTTAACATTGTTAACTTGTTTTAAATTCGACGAGATTTGTAAAACAA TTGAAAACTGAAACCCTAAATTAATCTTGCCGTAAAATCTGTTGTAATTTTGGATTTTTTCCGTTTCTTATCGGGTGGTGTTTTGATTCATATATGGTTT TTGGATTCGATTGTGATAGAAAGTGGAAAGTTACGGAAAAAGAAGAGATTGAAGCGATGACGAACGAGATCGAGGATGTAGAAGAGGGTGAGATTTCGGA TACTGCTTCTATTGAAGAGATTAGCGAAGAGGATTTCAAGAAGCAGCAAGATGTTGTTAAGGTCAATGATAATAAGGCTAAAGAGGATTCAACTCCTAGG GTTTGGGCTGTTCAGGATCTTTACACTAGGTATCCAAGTATTTGTAGTGGTTATGCTTCGGGTTTGTACAATCTTGCTTGGGCACAAGCAGTGAAGAATA AGCCTCTGAATGATATATTTGTGATGGATGTCGATAACTCGAATAAATTGTGTTCGGGTTCTGTTAAGGAGGATGTGGGTATGAATGGTCAAGTGGTGAT TGATCTTGATAAAGAGGACGGGGAGTTGGAGGAGGGTGAGATTGATGGTGATGCTGATCCAGAAGGAGGGAATGTTCAATGTGTTTTGAATTCTGAGGGA AAAAGTGTTCGGGAAGTTTTGGAGGGTTTTACTATTGCTAATGTGGAGGAAGCGTTTGCCGAGAATTGCGGTAAGCTGCAGAGTGCTTTGCAGAGTTTGC ATGCTGTTTTTGACAAGGATGATGTTCTTTTTGGCTTGTCATTCAATGCAATTGAAGTCATCTATTCTGTATTCTGCTCCATGGAGAGTTCCCAGAAAGA ACAGAACAATGATAACATATTAAGATTACTTTCTTTTGTGAAGGATCAGCAAGCTCATTTACTCACTCCTGAGCAATTTAAAGAGATTCAGGTCATGATT GCTGCTTTAGATTCTATTGGTGCTTTAAACAATGGTCAGGCTATTGGCAAGGAAAAGGAATCACAGAGCAATGAGATAAAAACTCTGGAAACTCAAGATA GAGGAGGTGGTGAATTGATTTCTTCTAGTAAGCCATTGGATAGCATCTCGAATGGGGTATCAGAAGCTTTGAAATTTGGACAAAGTAATTTTAACGGTAG AGGGGTTTTGGTCCCTCTGTTCGACCTTCATAAGGATCATGATATTGACAGTTTACCATCACCCACACGAGAAACACCATTTTGTTTCCCTATGAGTAAT GCATTTTCTGTTGGAGAGGGAGTTGTTAGACATGGGTTGCCCACACGTGAAATAGCAAGTTTCCCTGTGAATAAACCGTTTTCTGCTGCAGAGGGAATGA TTAGGTCTGAGTTGCCTGCTAGTAAAATGGAGGTTGTGAATATGGAAGTGGATAGTGAAGGTTCTAAATTGCATTCCTATGTAACAGATGCTCTGAAAGC TGTTTCCTCATATCAGCAGAAGTTTGGCCGAAGTACCTTTTTCACGAGTGAAGAACTTCCAAGTCCAACCCCTTCAGGAGATTGTGAGGATGTGGCTGTT GATACAAATGAGGAGGTTTCTAGTGCTTCTGTGGCTGGTTCTGCAATTAGCATCAAACCACCGTCACAGTCTTTGAATCAGCTGCCTGCTTCTTCTGCTT CCACGAATAGGTCCAGTATGCATGGATTGAGTAGTTCTAGAATTGACGCAGCAGGTTCTGGGTCTGACTCTAGAAAACCTTCAGTTAAGTCTAGAGATCC TAGGCTTCGCGTCACTAATTCTGATGCAAGTGCTTTGGGTCTTAACCATCGACCTTCCCTGATGAATAATATGCCTAACATGGAAAATGCTGGAACAATA ATATCAAGAAAGCAAAAGGCTGCTGAAGATCCTTCTTTGGACGATGCTGTATCAAAACGACTGAAAACTTCACTGGAAAATCCTGAGCGTAAAACAAGAG ATCCAAGAACTGCAGCCAGAAAACGTGGTTGGTTGGAAGAGACTTCCACTGTTGGATCTCAATCGATAGTCAGGAACAATGTGGAAGCCGAACCGAAAAA TACTACGGGTACAGTAAATAGTTCCTGTACTGGTTCTGGTCATTTCAACCCGACAAGTAATGGAAATCAGCAGGCGCCAGTTGCAACTAGTAACACCACA ACTTCCATACCTGCTGGGTGGAAAGATTTAGCTGTAAGCCCAGCAATGCTGGTAAAAATACTTATGGAACGGCAGAGATTAGCAGCAGAAACGAAAAAGA AATCTGATGATTATTCTATGAATATGCTAAATCTAGCAAGCGCAAATTCAGCAATGGGAACAGGTCCAACTATGAGTATTGGTACTTCAATGACCACTGG GATTCAGCAAAATTCTGTTGGAATGCTTCCAATTTCATCACCAGCAACCACCACGGTTCGAAGCCCACAAAATGATTCAGGAAAGATTCGCATGAAACCT CGTGATCCACGGCGCGCTCTCCATGGGCGTACTATTCCAAAGAGTGGGATCTTGGCGAGTGAGCAATCAAAAGCAATTGTTCTCTCGACATCAAACAACC CAGATACTGGTGACAATGTTAGTGCCCCAAAGCTTGAGGTTAGGGCTGACACAAAATTGGCGCCTTCTCAATCAATTGCACCACCTGATATTGCTGGACC GTTCACCAGGAATCTGAAAAGTATTGCTGATAGCATATCTGTTACCCAACAATCATCAAACAACTCTCCTGCTACTCAGACATTTTCTTCTGCACCTGTA CTTACATCAGATAGAGTGGAACAGAAACATGTAGTATCTAGCTCGCAGAACCTGCAGGCTAGCGTAGGATCAGCTCCTGAAACATGTGCTTCTGTTTCCT CTACACCTGAGAGCTCATGGGGAGATGTTGAGCATCTTTTTGAAGGTTATGACGAGAAGCAAAAGGCTGCTATACAGAGAGAAAGGGCTAGGAGGATAGA AGAACAGAATAAAATGTTTGCTGCTAGAAAGTTATGCCTTGTATTGGACCTAGATCACACACTTCTAAACTCTGCTAAGTTTGTAGAAGTAGACCCTGTA CATGATGAGATACTGAGAAAGAAAGAAGAACAAGATCGTGAGAAGCCTCAGAGGCATCTTTTTCGTTTTCCTCACTTGGGAATGTGGACTAAACTACGAC CAGGAATCTGGAACTTCTTGGAGAAGGCTAGTAAGCTCTTTGAGCTACATCTTTACACCATGGGAAACAAGCTATATGCAACAGAAATGGCGAAGGTACT CGATCCAAGGGGAACTTTGTTTAATGGTAGAGTTATTTCTAGAGGCGATGATATTGATTCAGTTGATGGTGTGGAGAGAGCCCCCAAAAGCAAGGATCTG GAAGGTGTTTTGGGTATGGAATCAGCTGTTGTAATTATAGATGATTCTGTGAGAGTCTGGCCTCATAACAAACTAAACTTGATAGTGGTGGAAAGGTATA CTTACTTCCCCTGTAGTAGACGTCAATTTGGACTTCCAGGTCCTTCTCTTCTCGAGATTGATCATGATGAAAGACCCGAAGCTGGAACTCTGGCATCTTC TTTAGGGGTGATTGAGAGAATACACCAAAACTTTTTTGCTTCTCAATCCTTGGAAGAAGTGGATGTCAGAAATATCCTAGCATCAGAGCAGAGAAAAATA TTGGCCGGTTGTCGTATAGTATTTAGCAGAGTATTTCCTGTTGGCGAAGCCAACCCTCATCTACACCCATTGTGGCAGACAGCTGAACAATTTGGTGCTG TTTGTACAAATCACATTGATGATCAGGTTACACATGTAGTTGCAAATAACCTTGGGACTGATAAGGTGAATTGGGCTCTTTCCATCGGAAGATTTGTTGT TCATCCTGGCTGGGTGGAAGCATCAGCATTGCTTTATAGGAGGGCGAATGAACAAGATTTTGCAATTAAACCATAAAAATGACAAACAACCTAATTCACT AAAATATGTGAAATCTAAATCAATAATCACATTGATTTTGGGGTGTGAAATCATTATATAAGAAAGGGGAGACAAGTTTAACTCATGATGCCTGCCCCGA GGTGGCGATTGGCGAGTATGCACATTTTTTACTAAGATGACTGCAAATTTGCTGAGGAGTTAATGGAGGTGTGTGAATGCCCTTGTGATTCTTGGGGTCT TTGCTTCTAGTGTTGGTCCTGAAGGGGGCCAAGAAACAAAGAACGACACAGTTTGAGGGGAATAAGTGAGTGGGGATGGTCAGTTTTGAGAATAGCTTCT AGTAAATTTTTCCTGAGATGATGTTCCATGAAAATATGGATCCAAATTTTTTAAGGGTAACATTTTTTTGTTGCTGACAAGGTAAAGTTAAAAAGGCTCA CAGCATTAAAAGAGGTAAAATGTGAAGGAGTTCTGACTGAAACTAATTTAGGAAAAGAAATAAGGGTTTCCTTTATTAGAATTGAAATCCAAAATACTTG GGGGTGCTAGAACAGCAATATCATGATATTTCTGGAATTGGATTTCATGTTCCAGAAAAATGAATTTCTGATAATCAAATTGGTATCAGTTGTAACTGTA TAATGCGTTTTGAGGGGCTTAAATTAATCACCATTCACCACCACACCCCTCAGAACAAATAAATTTTAGAGGGGGGGAGAGAAGATAGAAAATCACTCAG GAGCGTTCGTAACACTCCTTTGTATTTTTTGTTGGTTCTGCTTTGAATTTTTGCAGATCGTTTGGCCATATAGCTTAGAAATTCTTTATAATTTATAAAA ATGACAATCTGATTAATGATATCATTTTTCCA
• Tissue: flowers
• Gene name: LI_gene_81276;
• Additional information: details;

Expression of Ll_transcript_37842

FPKM

• FPAB: 1.4
• FPNAB: 1.8
• LF1: 1.3
• LF2: 1.4
• LF3: 1.3
• LF4: 1.2
• UF1: 1.2
• UF2: 1.1
• UF3: 1.3
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_37842

• Blastp: RNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.86% of identity
• Blastx: RNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.99% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT2G33540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419706.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;