Ll_transcript_37852

Id TrinityFTRINITY_DN58927_c0_g1_i8
Name TranscriptLl_transcript_37852
SequenceCACAGTTGTTATATTGAAATAAAAACTTTTTTAATTTTATTATCTCATTTTTTCTTCGTTCTGTTTGCGACAGAATTCGATCTCTTTGCAGATCATCTCT GCGGATCTTTCAATAACGAATCTCAATCTCGCAGTCACTTATCTCCGATTCGATTTAACATTGTTAACTTGTTTTAAATTCGACGAGATTTGTAAAACAA TTGAAAACTGAAACCCTAAATTAATCTTGCCGTAAAATCTGTTGTAATTTTGGATTTTTTCCGTTTCTTATCGGGTGGTGTTTTGATTCATATATGGTTT TTGGATTCGATTGTGATAGAAAGTGGAAAGTTACGGAAAAAGAAGAGATTGAAGCGATGACGAACGAGATCGAGGATGTAGAAGAGGGTGAGATTTCGGA TACTGCTTCTATTGAAGAGATTAGCGAAGAGGATTTCAAGAAGCAGCAAGATGTTGTTAAGGTCAATGATAATAAGGCTAAAGAGGATTCAACTCCTAGG GTTTGGGCTGTTCAGGATCTTTACACTAGGTATCCAAGTATTTGTAGTGGTTATGCTTCGGGTTTGTACAATCTTGCTTGGGCACAAGCAGTGAAGAATA AGCCTCTGAATGATATATTTGTGATGGATGTCGATAACTCGAATAAATTGTGTTCGGGTTCTGTTAAGGAGGATGTGGGTATGAATGGTCAAGTGGTGAT TGATCTTGATAAAGAGGACGGGGAGTTGGAGGAGGGTGAGATTGATGGTGATGCTGATCCAGAAGGAGGGAATGTTCAATGTGTTTTGAATTCTGAGGGA AAAAGTGTTCGGGAAGTTTTGGAGGGTTTTACTATTGCTAATGTGGAGGAAGCGTTTGCCGAGAATTGCGGTAAGCTGCAGAGTGCTTTGCAGAGTTTGC ATGCTGTTTTTGACAAGGATGATGTTCTTTTTGGCTTGTCATTCAATGCAATTGAAGTCATCTATTCTGTATTCTGCTCCATGGAGAGTTCCCAGAAAGA ACAGAACAATGATAACATATTAAGATTACTTTCTTTTGTGAAGGATCAGCAAGCTCATTTACTCACTCCTGAGCAATTTAAAGAGATTCAGGTCATGATT GCTGCTTTAGATTCTATTGGTGCTTTAAACAATGGTCAGGCTATTGGCAAGGAAAAGGAATCACAGAGCAATGAGATAAAAACTCTGGAAACTCAAGATA GAGGAGGTGGTGAATTGATTTCTTCTAGTAAGCCATTGGATAGCATCTCGAATGGGGTATCAGAAGCTTTGAAATTTGGACAAAGTAATTTTAACGGTAG AGGGGTTTTGGTCCCTCTGTTCGACCTTCATAAGGATCATGATATTGACAGTTTACCATCACCCACACGAGAAACACCATTTTGTTTCCCTATGAGTAAT GCATTTTCTGTTGGAGAGGGAGTTGTTAGACATGGGTTGCCCACACGTGAAATAGCAAGTTTCCCTGTGAATAAACCGTTTTCTGCTGCAGAGGGAATGA TTAGGTCTGAGTTGCCTGCTAGTAAAATGGAGGTTGTGAATATGGAAGTGGATAGTGAAGGTTCTAAATTGCATTCCTATGTAACAGATGCTCTGAAAGC TGTTTCCTCATATCAGCAGAAGTTTGGCCGAAGTACCTTTTTCACGAGTGAAGAACTTCCAAGTCCAACCCCTTCAGGAGATTGTGAGGATGTGGCTGTT GATACAAATGAGGAGGTTTCTAGTGCTTCTGTGGCTGGTTCTGCAATTAGCATCAAACCACCGTCACAGTCTTTGAATCAGCTGCCTGCTTCTTCTGCTT CCACGAATAGGTCCAGTATGCATGGATTGAGTAGTTCTAGAATTGACGCAGCAGGTTCTGGGTCTGACTCTAGAAAACCTTCAGTTAAGTCTAGAGATCC TAGGCTTCGCGTCACTAATTCTGATGCAAGTGCTTTGGGTCTTAACCATCGACCTTCCCTGATGAATAATATGCCTAACATGGAAAATGCTGGAACAATA ATATCAAGAAAGCAAAAGGCTGCTGAAGATCCTTCTTTGGACGATGCTGTATCAAAACGACTGAAAACTTCACTGGAAAATCCTGAGCGTAAAACAAGAG ATCCAAGAACTGCAGCCAGAAAACGTGGTTGGTTGGAAGAGACTTCCACTGTTGGATCTCAATCGATAGTCAGGAACAATGTGGAAGCCGAACCGAAAAA TACTACGGGTACAGTAAATAGTTCCTGTACTGGTTCTGGTCATTTCAACCCGACAAGTAATGGAAATCAGCAGGCGCCAGTTGCAACTAGTAACACCACA ACTTCCATACCTGCTGGGTGGAAAGATTTAGCTGTAAGCCCAGCAATGCTGGTAAAAATACTTATGGAACGGCAGAGATTAGCAGCAGAAACGAAAAAGA AATCTGATGATTATTCTATGAATATGCTAAATCTAGCAAGCGCAAATTCAGCAATGGGAACAGGTCCAACTATGAGTATTGGTACTTCAATGACCACTGG GATTCAGCAAAATTCTGTTGGAATGCTTCCAATTTCATCACCAGCAACCACCACGGTTCGAAGCCCACAAAATGATTCAGGAAAGATTCGCATGAAACCT CGTGATCCACGGCGCGCTCTCCATGGGCGTACTATTCCAAAGAGTGGGATCTTGGCGAGTGAGCAATCAAAAGCAATTGTTCTCTCGACATCAAACAACC CAGATACTGGTGACAATGTTAGTGCCCCAAAGCTTGAGGTTAGGGCTGACACAAAATTGGCGCCTTCTCAATCAATTGCACCACCTGATATTGCTGGACC GTTCACCAGGAATCTGAAAAGTATTGCTGATAGCATATCTGTTACCCAACAATCATCAAACAACTCTCCTGCTACTCAGACATTTTCTTCTGCACCTGTA CTTACATCAGATAGAGTGGAACAGAAACATGTAGTATCTAGCTCGCAGAACCTGCAGGCTAGCGTAGGATCAGCTCCTGAAACATGTGCTTCTGTTTCCT CTACACCTGAGAGCTCATGGGGAGATGTTGAGCATCTTTTTGAAGGTTATGACGAGAAGCAAAAGGCTGCTATACAGAGAGAAAGGGCTAGGAGGATAGA AGAACAGAATAAAATGTTTGCTGCTAGAAAGTTATGCCTTGTATTGGACCTAGATCACACACTTCTAAACTCTGCTAAGTTTGTAGAAGTAGACCCTGTA CATGATGAGATACTGAGAAAGAAAGAAGAACAAGATCGTGAGAAGCCTCAGAGGCATCTTTTTCGTTTTCCTCACTTGGGAATGTGGACTAAACTACGAC CAGGAATCTGGAACTTCTTGGAGAAGGCTAGTAAGCTCTTTGAGCTACATCTTTACACCATGGGAAACAAGCTATATGCAACAGAAATGGCGAAGGTACT CGATCCAAGGGGAACTTTGTTTAATGGTAGAGTTATTTCTAGAGGCGATGATATTGATTCAGTTGATGGTGTGGAGAGAGCCCCCAAAAGCAAGGATCTG GAAGGTGTTTTGGGTATGGAATCAGCTGTTGTAATTATAGATGATTCTGTGAGAGTCTGGCCTCATAACAAACTAAACTTGATAGTGGTGGAAAGGTATA CTTACTTCCCCTGTAGTAGACGTCAATTTGGACTTCCAGGTCCTTCTCTTCTCGAGATTGATCATGATGAAAGACCCGAAGCTGGAACTCTGGCATCTTC TTTAGGGGTGATTGAGAGAATACACCAAAACTTTTTTGCTTCTCAATCCTTGGAAGAAGTGGATGTCAGAAATATCCTAGCATCAGAGCAGAGAAAAATA TTGGCCGGTTGTCGTATAGTATTTAGCAGAGTATTTCCTGTTGGCGAAGCCAACCCTCATCTACACCCATTGTGGCAGACAGCTGAACAATTTGGTGCTG TTTGTACAAATCACATTGATGATCAGGTTACACATGTAGTTGCAAATAACCTTGGGACTGATAAGGTGAATTGGGCTCTTTCCATCGGAAGATTTGTTGT TCATCCTGGCTGGGTGGAAGCATCAGCATTGCTTTATAGGAGGGCGAATGAACAAGATTTTGCAATAAAACCATAAAAATGACCAACAACCTAATTCTCT TTGGAAAACTAAAATATGTGAAATCTAAATCAATAATCACATTGATTTTGGGGTGTGAAACCATTAGATAAGAATTGGTTAGGGGAGACAAGTTTAACTC ATGATGCCTGCCTCGAGGTGGCGATCGGCGAGTATGCACAATTTTACTAAGATGACTGCAAATTTGATGAGAGGAGTTAATGGAGGATTGTGTGAATGAC CCTGTGAGTCTTGGGGTCTTTGCTTCTGGGGTTGGTGCTGAAGGGGGCCAAGAAAGGAAGATTGACACTGCTTGAGGGACTAAGTGAGTGGGGTTGGTGG GTTTTGAGAATAGCTCCTAGTAAATTTTGCCTGAGATGGTGTTCAAGATTGAAAATTTGGGTCCAAATTTTTTAAGGGTAACATTTTTTGTTGCCAACAA AGCAAAGTTAAAAGGCCTCAGCATTAAAAGAGGTAAAATGTGAAGGAATTCTGACTGGAACTAATTTAGGAAAAGAAATAAATTCCTGATAAACAATATC AGGATTTTTCTGGAATTGGATTCATGCTCCAGCAAAATAAATTCGTGATAATCAAATTGGTATCAATTGTAACTGTATAATGTGTTTGAGGGGCTTGAAT CAATCACCATTCACCAATCACCACCCTCACAACAAATAAATTTTAGTAGTGAGGGGGAAAAGATAGAACATGATCAAGAAGCGTTCATAACAGTCCTCTG TAATTGTTGTTGGTTCTGCTTTGAATTTTTGCAGATCGTTTGGCCATATAGCTTAGAAATTCTTTATAATTTATAAAAATGACAATCTGATTAATGATAT CATTTTTCCA BLAST
Tissueflowers
Gene nameLI_gene_81276; 
Additional informationdetails; 

Expression of Ll_transcript_37852

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_37852
BlastpRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.86% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.99% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT2G33540)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419706.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;