Ll_transcript_36962

Id TrinityFTRINITY_DN58928_c1_g1_i17
Name TranscriptLl_transcript_36962
SequenceATTAAATAATGCTGTGTTGAGTTTGTGAACTCTGAACTGCTCCGGCGGCGATGGAGGTTTCCGGTGGAAGGAGGTGGGAGGCGGAGGTGGTGGAGTTAAC AAAGGTGGCGCAGGAGAAAGAGAGTGATCCTCTGGTATGGGCAATTCAGATGCATTCGAATTTGAACTCAGCGGGAGAGTGTTTACCCTCCGTTGAACTC GCGGAGTTATTGGTTTCTTACATTTGTTGGGACAATAATGTTCCTATTCTATGGAAGTTTCTCGATAAGGCTCTCATGCTTCAAATTGTTCCTCCCATGC TTCTTCTGGCTCTTCTTTCTCTCAGGGTTCTTCCATGTAGGCATGTCCAGCCTGCAGCATATAGGCTGTATTTGGAACTCCTCAAAAGACATGCTTTTGA ACTTAAATCTCAGACAAACAGACCAGATTATCCAAGGGTCATGAAATCTATAGATGACGTCCTTCATCTTTCCCACATATTTGGCATGTCACAAAGTGAG CCTGGCATTCTGGTGGTTGAATTTATTTTTTCAATTGTCTGGCAGTTACTTGATGCATCGTTGGATGATGAAGGGCTGTTGGAACTTACACTTGAAAAGA AGTCTATGTGGGAAACACTATATCAAGAAATGGAACTGGATAGGCATGATAATTATAATGATAAGAAGACCGAACATCATGAAAAATTGAGAAATGCAAA TGCTCTTGTGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAACATCTTCAAGAATTCTTTACTTGGCTCACCGAAATTTGCCTGCTCATTGGCTA AGCCTTGTTCAGCGGGTGCAGTTGCTCGGAGCAAATTCATTAACATTGAGAAATTCAAGAGTTTTAAGTCCTGAGGCACTTCTGCAACTGACTTCAGATA CTTCTATGGCTTTGTCTCGAGAATACAAAACAAGTTCACAACATAAGTTTCATACAGTTATGGATTTTGAATATCTTTCTTCTTCTGCATCACTCTGCCA TGGTGCAAGTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGAATGCCATGGATGGCTATGAAGTTAGTGCAACAAGTGCTATTGAAATAATT GGTGGTTTGATAAAGACTCTCCGAGCCATAAATGGGACCCCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTATTCAGAGGGTAG AACTCTTTATCAACAACTCAATGTGTTTTCCTGTGAAATTTTGGTGTCAAATATATCTTGTCCATTTATGCTGGAAAGAGATCCTATCGAGGGCCCAATG CCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATCATACCTCTTGTTGTTGCTGATCTTATTGAGGAGGAGGAGGAAAGGACACAAGTTGATGAAA CAGAAACGGACAGTGATCCTACAAATAACTGGAAAGAGAAGATGGTTCCAGGAAAATGTCGCAATGATTTAGTCACGAGTCTGCAGGTATTGGGAGATTA TCACAGCTTGCTCACTCCACCTCAATCTGTTGTGGCTGCTGCAAATCAGGCTGCTGCAAAAGCAATGCTCTTTGTTTCTGGCTTCACAATAGGGAATGCA AATTTTGACTGCCTCAGCATGACAGAGATTCCAATTGACTGTTGTAAGTCATATTGCTTTCAGTAATTCAGTGTCAATCAGAAATTGCCTATGGTTCTTC AGCAGCTTGAGTAATTTATATCAACTTTAGCACTGCATACTGACGATGTTGTTTTCCATTTGAGATTCTCCATGTGAGTTTTCTTCCTGATTTAAAAAAA CACATGCCTCATATTTCAGACGTTTAGATGAATAAATAAAACAAAAATCTGTGTGATAATGTATCTGATTGCTGTGAAGACAATCTTTATCGTCTGATTT AAGTAAATTTGAACTTTGGAAAAGCAAATGGATTACACAATTTGAATCTATGATAGCTATGCTGTAGTCAAGACACAAGGATCCATAACAGTTACTCGTG TTCCCACATTATTCTTTGGATTGATTATGTGACTGTACAGAAGTGGAAATGATCTTATTTTGCTAAATATTTGTGCTAAACAAAATCATTGCATGGTTGA ATAAAGAAAAATCATTTCCCTTGTCATAAACTATCTCTCCCAAAATCTTAAGTTGTTGATAAAGGCGTACGAGTGATTTGTATTACATCTCTTAACACAT TCCCTTTACCCCAAAAGCTTGTGCTTAAATTCAATTTATTATTGTTAAATAGGGCAGCAAGGACCAACCACTTGTCCCATTCCTGTATTTGTTAAATTTC TAGTTTAGCATTTCAATTTTCCCAAAGTTAGCGATTCTGCATTTTATATTTGGCAGTTTATTTCGTAAGGAATTTGTACTCTTGATGCTATACAGAGTCA ATCCTATGCCTAGATAAAAGGTGGAGATTATGTTAGGCAGTCAACAACTAACATAAAACTTTGTCGACTCTCTATGAATCATTCAGGAGTTATATATCTG AGAAAAAATGAAGGAAAACAATCTTGGGAAAAATAATTTTATTTAGTAATAACTAACAACCCAACAGAATAACAATATCTTAAGAACAGTGGTGCAAACA GTTATTGACCTAATCGACCAGTTGACTGGTTAATGTTCCCAAATTGTAATAATTTTACAAATAATTGTTTCTTTGTAATTTCCCTTAATTTTGTAAAACT ATTTCTTCTTTTCAGCTGGAAACATGCGTCATCTACTAGTTGAGGCTTGTATTGCTCGAAATCTACTCGACACATCTGCATATTTATGGCCAGGTTATGT CAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGTTCAACTACCAAGCTGGTTGTCGTTTATGGACGGAGCACCACTTGATTCAGCGATGGTAAAT GCTCTGGCTTCAAGTCCTGCTACAAGGTATGTCAGATGCTCTTTTTTGTAAATTTACCAAAAGGTAAAACTACTGAATTTACGCTCCTGGATTTAATGGA AGCTTAGCAGAACTGGAGAAAATTTTTGAAATTGCAATCGGGGGATCAGAAGATCAGAAGATATCTGCTGCTGCCATTCTTTGTGGGGCATCACTAATTA GAGGATGGAACATACAGGAGTACACTGCTCATTTCATTCTTAGGTTATTATCTCCACCTGTTCCTCTAGAGAACACTGAAGGAAACAACCATTTGATTGA TTATGCTCCAATACTTAATGTAATCTTTGTTGGAATTGCATCCGTTGATTGTGTTCAAATATTTTCGCTCCATGGTTTGGTTCCGCAGCTTGCATGCTCA TTGATGCCAATTTGTGAAGTTTTTGGGTCATGTGTGCCTAATATTTCATGGACACTGACATCAGGGGTGCAAATATCTGCCCATGCTGTGTTTTCAAATG CATTTATTCTTCTTTTAAAGCTATGGAAATTTAATCGGCCCCCTCTTGAACATGGAATTGGAGATGTACCTACTGTTGGTTCTCAGTTAACTCCTGAATA CCTACTATTAGTTCGAAACTCCCACTTAATGTCAGATGGTAACATCCACAAAGATCGAAACAGGAAGAGGCTATCTGAGATTGCAAGTTTATCATCACCA AATTCTGTATTTGTTGACTCCTTTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACACTGTCCGGTCTTGTTCATGGAACCC CTTTTCATCAAATTGTTGATGGGCTTCTTAACATGATGTTTAGAAATATTAGTAGAGGGGACCAGGTTACTATTGTATCTGGAAGCAGTAGTTCTTCTGG ACCTGAAAATGAAGATACTTTTATAGGGACAAAGTTGCCTGCATGGGATATTTTGGAAGCCATTCCCTTTGTTGTTGATGCTGCTGTCACAGCCTGTGCT CATGGAAGACTGTCTCCTCGTGAGTTGGCAACAGGGCTGAAAGAATTAGCTGATTTTCTTCCTGCATCATTGGCAACTATAATAAGTTACTTCTCTGCTG AAGTAACTCGAGGTGTTTGGAAACCTGTATTTATGAATGGAACGGATTGGCCAAGCCCTGCTGCAAATCTATTGAACGTTGAGGAACAGATCAAGAAGAT TTTGGCTGCGACTGGTGTTGATGTGCCTAGCCTTGCTCCAGGAGGCAGCTCACCTGCCACACTTCCATTGCCATTGGCTGCTTTCACAAGTCTCACCATA ACCTACAAAGTTGACAGAGCATCTGAGCGTTTTCTGAATTTGGCTGGCCAAACACTGGAGTCCCTTGCTGCAGGTTGTCCATGGCCTAGCATGCCAATTG TGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGAGTGACTTCCTTATCTTCTCAGCTTCTAGAACAGTCTTCCTCCATAATAGGGATGCAGTTGTTCA ACTTCTTAAAAGCTGTTTCACAGCTACCCTTGGCATGAATAGCTCTCCTATCTCAAGCAATGGTGGTGTTGGAGCCCTCCTTGGCCATGGATTTAAGTCC CATTTTTGTGGAGGGATGTGCCCTGTTGCTCCAGGAATTCTCTACTTACGTGTTTATCGGTCAATCAGAGATGTTGTTTTCTTGACAGAAGAAATTGTTT CCATCTTGATGCAATCTGTGCGAGAAATTGTATGTAGTGGTCCGTCAAGGGAGCAATTACAGAAGTCGAAAGCAACCAAAGATGGCATAAAATACGGACA GGTTTCACTTGCCGCAGCAATGACTCAGGTGAAACTTGCAGCTGCTCTTGGGGCTTCTTTAGTATGGCTATCTGGAGGGTTGGTGCTGGTTCAATTATTA ATAAAAGAGACTTTGCCCTCATGGTTTATATCTGTTCACAGATCAGGCCAGGAAGAAAAGTCAGACGGAATGGTTGCAATGCTTGCTGGATATGCACTTG CTTACTTTGCAGTGCTTAGTGGGGCTTTTGCTTGGGGAGTTGACTCATCATCATCGGCTTCAAAACGACGTCGAAAAGTCTTAGGTGTCCACATGGAGTT TCTGGCAAGTGCACTCGATGGAAAAATATCACTTGGCTGTGATTCAGCTACTTGGCGAGCCTATGTGTCAGGGTTTGTGAGCCTGATGGTTAGTTGCACG CCAAACTGGGTGCTAGAAGTAGATGTCGATGTGTTGAAGAGACTGAGCAATGGCTTGAGGCACTTGAATGAAGAGAAGCTTGCACTTGCTTTGTTGGGTA ATGGTGGGGTTGGTACTATGGGTGCTGCAGCTGAACTCATAATTGAAAGTGGAAGGTAAGCTTATTCTCCAGCACCTGTGCCTTTTAGTATGCTTATGTA CAGTAGTTTCATGTTTAAAAACTTGTGCAGTGCTAAATCTCCTCTTTTGTTTCAAAAGCATCACTTATGAGAATGGAAAATTTTGTATCTGAACTATGCT CAATCTAAGGTAACTTTCTTTCATGTTTGAAGTGATGAAACATTGCATAGGTAAAGATATGTTAAGTTTTTTATTCATTATTCTGGGGGGAAATAAAACT ACCAACTATTTATGAATCTATTAGTATTTTATTATTATATCACTCCATTGCTAAGGTATATAAGTGATTTGAAATACTGTGTATAAAGTATAATCAATGA ACATAGTATTAGACTTGGGTACTATTGTGTCTGAAATGTGAATGGTATTAATATATTTCTCCAATTGTTTCTAG BLAST
Tissueflowers
Gene nameLI_gene_81282; 
Additional informationdetails; 

Expression of Ll_transcript_36962

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_36962
BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 69.89% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 69.15% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425896.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;