Ll_transcript_36963

Id TrinityFTRINITY_DN58928_c1_g1_i18
Name TranscriptLl_transcript_36963
SequenceATTAAATAATGCTGTGTTGAGTTTGTGAACTCTGAACTGCTCCGGCGGCGATGGAGGTTTCCGGTGGAAGGAGGTGGGAGGCGGAGGTGGTGGAGTTAAC AAAGGTGGCGCAGGAGAAAGAGAGTGATCCTCTGGTATGGGCAATTCAGATGCATTCGAATTTGAACTCAGCGGGAGAGTGTTTACCCTCCGTTGAACTC GCGGAGTTATTGGTTTCTTACATTTGTTGGGACAATAATGTTCCTATTCTATGGAAGTTTCTCGATAAGGCTCTCATGCTTCAAATTGTTCCTCCCATGC TTCTTCTGGCTCTTCTTTCTCTCAGGGTTCTTCCATGTAGGCATGTCCAGCCTGCAGCATATAGGCTGTATTTGGAACTCCTCAAAAGACATGCTTTTGA ACTTAAATCTCAGACAAACAGACCAGATTATCCAAGGGTCATGAAATCTATAGATGACGTCCTTCATCTTTCCCACATATTTGGCATGTCACAAAGTGAG CCTGGCATTCTGGTGGTTGAATTTATTTTTTCAATTGTCTGGCAGTTACTTGATGCATCGTTGGATGATGAAGGGCTGTTGGAACTTACACTTGAAAAGA AGTCTATGTGGGAAACACTATATCAAGAAATGGAACTGGATAGGCATGATAATTATAATGATAAGAAGACCGAACATCATGAAAAATTGAGAAATGCAAA TGCTCTTGTGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAACATCTTCAAGAATTCTTTACTTGGCTCACCGAAATTTGCCTGCTCATTGGCTA AGCCTTGTTCAGCGGGTGCAGTTGCTCGGAGCAAATTCATTAACATTGAGAAATTCAAGAGTTTTAAGTCCTGAGGCACTTCTGCAACTGACTTCAGATA CTTCTATGGCTTTGTCTCGAGAATACAAAACAAGTTCACAACATAAGTTTCATACAGTTATGGATTTTGAATATCTTTCTTCTTCTGCATCACTCTGCCA TGGTGCAAGTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGAATGCCATGGATGGCTATGAAGTTAGTGCAACAAGTGCTATTGAAATAATT GGTGGTAAGACTGAGACAAACATTTGGAATCTGTCAGAAATGTAGATATCTTCTCAACTTCAGTTTTAGGTACTTGTCAGATGAATGATTTTGTGCTGTG TAGGTTTGATAAAGACTCTCCGAGCCATAAATGGGACCCCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTATTCAGAGGGAAAG AGATCCTATCGAGGGCCCAATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATCATACCTCTTGTTGTTGCTGATCTTATTGAGGAGGAGGAG GAAAGGACACAAGTTGATGAAACAGAAACGGACAGTGATCCTACAAATAACTGGAAAGAGAAGATGGTTCCAGGAAAATGTCGCAATGATTTAGTCACGA GTCTGCAGGTATTGGGAGATTATCACAGCTTGCTCACTCCACCTCAATCTGTTGTGGCTGCTGCAAATCAGGCTGCTGCAAAAGCAATGCTCTTTGTTTC TGGCTTCACAATAGGGAATGCAAATTTTGACTGCCTCAGCATGACAGAGATTCCAATTGACTGTTGTAAGTCATATTGCTTTCAGTAATTCAGTGTCAAT CAGAAATTGCCTATGGTTCTTCAGCAGCTTGAGTAATTTATATCAACTTTAGCACTGCATACTGACGATGTTGTTTTCCATTTGAGATTCTCCATGTGAG TTTTCTTCCTGATTTAAAAAAACACATGCCTCATATTTCAGACGTTTAGATGAATAAATAAAACAAAAATCTGTGTGATAATGTATCTGATTGCTGTGAA GACAATCTTTATCGTCTGATTTAAGTAAATTTGAACTTTGGAAAAGCAAATGGATTACACAATTTGAATCTATGATAGCTATGCTGTAGTCAAGACACAA GGATCCATAACAGTTACTCGTGTTCCCACATTATTCTTTGGATTGATTATGTGACTGTACAGAAGTGGAAATGATCTTATTTTGCTAAATATTTGTGCTA AACAAAATCATTGCATGGTTGAATAAAGAAAAATCATTTCCCTTGTCATAAACTATCTCTCCCAAAATCTTAAGTTGTTGATAAAGGCGTACGAGTGATT TGTATTACATCTCTTAACACATTCCCTTTACCCCAAAAGCTTGTGCTTAAATTCAATTTATTATTGTTAAATAGGGCAGCAAGGACCAACCACTTGTCCC ATTCCTGTATTTGTTAAATTTCTAGTTTAGCATTTCAATTTTCCCAAAGTTAGCGATTCTGCATTTTATATTTGGCAGTTTATTTCGTAAGGAATTTGTA CTCTTGATGCTATACAGAGTCAATCCTATGCCTAGATAAAAGGTGGAGATTATGTTAGGCAGTCAACAACTAACATAAAACTTTGTCGACTCTCTATGAA TCATTCAGGAGTTATATATCTGAGAAAAAATGAAGGAAAACAATCTTGGGAAAAATAATTTTATTTAGTAATAACTAACAACCCAACAGAATAACAATAT CTTAAGAACAGTGGTGCAAACAGTTATTGACCTAATCGACCAGTTGACTGGTTAATGTTCCCAAATTGTAATAATTTTACAAATAATTGTTTCTTTGTAA TTTCCCTTAATTTTGTAAAACTATTTCTTCTTTTCAGCTGGAAACATGCGTCATCTACTAGTTGAGGCTTGTATTGCTCGAAATCTACTCGACACATCTG CATATTTATGGCCAGGTTATGTCAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGTTCAACTACCAAGCTGGTTGTCGTTTATGGACGGAGCACC ACTTGATTCAGCGATGGTAAATGCTCTGGCTTCAAGTCCTGCTACAAGGTATGTCAGATGCTCTTTTTTGTAAATTTACCAAAAGGTAAAACTACTGAAT TTACGCTCCTGGATTTAATGGAAGCTTAGCAGAACTGGAGAAAATTTTTGAAATTGCAATCGGGGGATCAGAAGATCAGAAGATATCTGCTGCTGCCATT CTTTGTGGGGCATCACTAATTAGAGGATGGAACATACAGGAGTACACTGCTCATTTCATTCTTAGGTTATTATCTCCACCTGTTCCTCTAGAGAACACTG AAGGAAACAACCATTTGATTGATTATGCTCCAATACTTAATGTAATCTTTGTTGGAATTGCATCCGTTGATTGTGTTCAAATATTTTCGCTCCATGGTTT GGTTCCGCAGCTTGCATGCTCATTGATGCCAATTTGTGAAGTTTTTGGGTCATGTGTGCCTAATATTTCATGGACACTGACATCAGGGGTGCAAATATCT GCCCATGCTGTGTTTTCAAATGCATTTATTCTTCTTTTAAAGCTATGGAAATTTAATCGGCCCCCTCTTGAACATGGAATTGGAGATGTACCTACTGTTG GTTCTCAGTTAACTCCTGAATACCTACTATTAGTTCGAAACTCCCACTTAATGTCAGATGGTAACATCCACAAAGATCGAAACAGGAAGAGGCTATCTGA GATTGCAAGTTTATCATCACCAAATTCTGTATTTGTTGACTCCTTTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACACTG TCCGGTCTTGTTCATGGAACCCCTTTTCATCAAATTGTTGATGGGCTTCTTAACATGATGTTTAGAAATATTAGTAGAGGGGACCAGGTTACTATTGTAT CTGGAAGCAGTAGTTCTTCTGGACCTGAAAATGAAGATACTTTTATAGGGACAAAGTTGCCTGCATGGGATATTTTGGAAGCCATTCCCTTTGTTGTTGA TGCTGCTGTCACAGCCTGTGCTCATGGAAGACTGTCTCCTCGTGAGTTGGCAACAGGGCTGAAAGAATTAGCTGATTTTCTTCCTGCATCATTGGCAACT ATAATAAGTTACTTCTCTGCTGAAGTAACTCGAGGTGTTTGGAAACCTGTATTTATGAATGGAACGGATTGGCCAAGCCCTGCTGCAAATCTATTGAACG TTGAGGAACAGATCAAGAAGATTTTGGCTGCGACTGGTGTTGATGTGCCTAGCCTTGCTCCAGGAGGCAGCTCACCTGCCACACTTCCATTGCCATTGGC TGCTTTCACAAGTCTCACCATAACCTACAAAGTTGACAGAGCATCTGAGCGTTTTCTGAATTTGGCTGGCCAAACACTGGAGTCCCTTGCTGCAGGTTGT CCATGGCCTAGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGAGTGACTTCCTTATCTTCTCAGCTTCTAGAACAGTCTTCCTCC ATAATAGGGATGCAGTTGTTCAACTTCTTAAAAGCTGTTTCACAGCTACCCTTGGCATGAATAGCTCTCCTATCTCAAGCAATGGTGGTGTTGGAGCCCT CCTTGGCCATGGATTTAAGTCCCATTTTTGTGGAGGGATGTGCCCTGTTGCTCCAGGAATTCTCTACTTACGTGTTTATCGGTCAATCAGAGATGTTGTT TTCTTGACAGAAGAAATTGTTTCCATCTTGATGCAATCTGTGCGAGAAATTGTATGTAGTGGTCCGTCAAGGGAGCAATTACAGAAGTCGAAAGCAACCA AAGATGGCATAAAATACGGACAGGTTTCACTTGCCGCAGCAATGACTCAGGTGAAACTTGCAGCTGCTCTTGGGGCTTCTTTAGTATGGCTATCTGGAGG GTTGGTGCTGGTTCAATTATTAATAAAAGAGACTTTGCCCTCATGGTTTATATCTGTTCACAGATCAGGCCAGGAAGAAAAGTCAGACGGAATGGTTGCA ATGCTTGCTGGATATGCACTTGCTTACTTTGCAGTGCTTAGTGGGGCTTTTGCTTGGGGAGTTGACTCATCATCATCGGCTTCAAAACGACGTCGAAAAG TCTTAGGTGTCCACATGGAGTTTCTGGCAAGTGCACTCGATGGAAAAATATCACTTGGCTGTGATTCAGCTACTTGGCGAGCCTATGTGTCAGGGTTTGT GAGCCTGATGGTTAGTTGCACGCCAAACTGGGTGCTAGAAGTAGATGTCGATGTGTTGAAGAGACTGAGCAATGGCTTGAGGCACTTGAATGAAGAGAAG CTTGCACTTGCTTTGTTGGGTAATGGTGGGGTTGGTACTATGGGTGCTGCAGCTGAACTCATAATTGAAAGTGGAAGGTAAGCTTATTCTCCAGCACCTG TGCCTTTTAGTATGCTTATGTACAGTAGTTTCATGTTTAAAAACTTGTGCAGTGCTAAATCTCCTCTTTTGTTTCAAAAGCATCACTTATGAGAATGGAA AATTTTGTATCTGAACTATGCTCAATCTAAGGTAACTTTCTTTCATGTTTGAAGTGATGAAACATTGCATAGGTAAAGATATGTTAAGTTTTTTATTCAT TATTCTGGGGGGAAATAAAACTACCAACTATTTATGAATCTATTAGTATTTTATTATTATATCACTCCATTGCTAAGGTATATAAGTGATTTGAAATACT GTGTATAAAGTATAATCAATGAACATAGTATTAGACTTGGGTACTATTGTGTCTGAAATGTGAATGGTATTAATATATTTCTCCAATTGTTTCTAG BLAST
Tissueflowers
Gene nameLI_gene_81282; 
Additional informationdetails; 

Expression of Ll_transcript_36963

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_36963
BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 69.89% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 69.15% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425896.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;