Ll_transcript_36946

Id TrinityFTRINITY_DN58928_c1_g1_i3
Name TranscriptLl_transcript_36946
SequenceATTAAATAATGCTGTGTTGAGTTTGTGAACTCTGAACTGCTCCGGCGGCGATGGAGGTTTCCGGTGGAAGGAGGTGGGAGGCGGAGGTGGTGGAGTTAAC AAAGGTGGCGCAGGAGAAAGAGAGTGATCCTCTGGTATGGGCAATTCAGATGCATTCGAATTTGAACTCAGCGGGAGAGTGTTTACCCTCCGTTGAACTC GCGGAGTTATTGGTTTCTTACATTTGTTGGGACAATAATGTTCCTATTCTATGGAAGTTTCTCGATAAGGCTCTCATGCTTCAAATTGTTCCTCCCATGC TTCTTCTGGCTCTTCTTTCTCTCAGGGTTCTTCCATGTAGGCATGTCCAGCCTGCAGCATATAGGCTGTATTTGGAACTCCTCAAAAGACATGCTTTTGA ACTTAAATCTCAGACAAACAGACCAGATTATCCAAGGGTCATGAAATCTATAGATGACGTCCTTCATCTTTCCCACATATTTGGCATGTCACAAAGTGAG CCTGGCATTCTGGTGGTTGAATTTATTTTTTCAATTGTCTGGCAGTTACTTGATGCATCGTTGGATGATGAAGGGCTGTTGGAACTTACACTTGAAAAGA AGTCTATGTGGGAAACACTATATCAAGAAATGGAACTGGATAGGCATGATAATTATAATGATAAGAAGACCGAACATCATGAAAAATTGAGAAATGCAAA TGCTCTTGTGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAACATCTTCAAGAATTCTTTACTTGGCTCACCGAAATTTGCCTGCTCATTGGCTA AGCCTTGTTCAGCGGGTGCAGTTGCTCGGAGCAAATTCATTAACATTGAGAAATTCAAGAGTTTTAAGTCCTGAGGCACTTCTGCAACTGACTTCAGATA CTTCTATGGCTTTGTCTCGAGAATACAAAACAAGTTCACAACATAAGTTTCATACAGTTATGGATTTTGAATATCTTTCTTCTTCTGCATCACTCTGCCA TGGTGCAAGTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGAATGCCATGGATGGCTATGAAGTTAGTGCAACAAGTGCTATTGAAATAATT GGTGGTTTGATAAAGACTCTCCGAGCCATAAATGGGACCCCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTATTCAGAGGGAAA GAGATCCTATCGAGGGCCCAATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATCATACCTCTTGTTGTTGCTGATCTTATTGAGGAGGAGGA GGAAAGGACACAAGTTGATGAAACAGAAACGGACAGTGATCCTACAAATAACTGGAAAGAGAAGATGGTTCCAGGAAAATGTCGCAATGATTTAGTCACG AGTCTGCAGGTATTGGGAGATTATCACAGCTTGCTCACTCCACCTCAATCTGTTGTGGCTGCTGCAAATCAGGCTGCTGCAAAAGCAATGCTCTTTGTTT CTGGCTTCACAATAGGGAATGCAAATTTTGACTGCCTCAGCATGACAGAGATTCCAATTGACTGTTGTAAGTCATATTGCTTTCAGTAATTCAGTGTCAA TCAGAAATTGCCTATGGTTCTTCAGCAGCTTGAGTAATTTATATCAACTTTAGCACTGCATACTGACGATGTTGTTTTCCATTTGAGATTCTCCATGTGA GTTTTCTTCCTGATTTAAAAAAACACATGCCTCATATTTCAGACGTTTAGATGAATAAATAAAACAAAAATCTGTGTGATAATGTATCTGATTGCTGTGA AGACAATCTTTATCGTCTGATTTAAGTAAATTTGAACTTTGGAAAAGCAAATGGATTACACAATTTGAATCTATGATAGCTATGCTGTAGTCAAGACACA AGGATCCATAACAGTTACTCGTGTTCCCACATTATTCTTTGGATTGATTATGTGACTGTACAGAAGTGGAAATGATCTTATTTTGCTAAATATTTGTGCT AAACAAAATCATTGCATGGTTGAATAAAGAAAAATCATTTCCCTTGTCATAAACTATCTCTCCCAAAATCTTAAGTTGTTGATAAAGGCGTACGAGTGAT TTGTATTACATCTCTTAACACATTCCCTTTACCCCAAAAGCTTGTGCTTAAATTCAATTTATTATTGTTAAATAGGGCAGCAAGGACCAACCACTTGTCC CATTCCTGTATTTGTTAAATTTCTAGTTTAGCATTTCAATTTTCCCAAAGTTAGCGATTCTGCATTTTATATTTGGCAGTTTATTTCGTAAGGAATTTGT ACTCTTGATGCTATACAGAGTCAATCCTATGCCTAGATAAAAGGTGGAGATTATGTTAGGCAGTCAACAACTAACATAAAACTTTGTCGACTCTCTATGA ATCATTCAGGAGTTATATATCTGAGAAAAAATGAAGGAAAACAATCTTGGGAAAAATAATTTTATTTAGTAATAACTAACAACCCAACAGAATAACAATA TCTTAAGAACAGTGGTGCAAACAGTTATTGACCTAATCGACCAGTTGACTGGTTAATGTTCCCAAATTGTAATAATTTTACAAATAATTGTTTCTTTGTA ATTTCCCTTAATTTTGTAAAACTATTTCTTCTTTTCAGCTGGAAACATGCGTCATCTACTAGTTGAGGCTTGTATTGCTCGAAATCTACTCGACACATCT GCATATTTATGGCCAGGTTATGTCAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGTTCAACTACCAAGCTGGTTGTCGTTTATGGACGGAGCAC CACTTGATTCAGCGATGGTAAATGCTCTGGCTTCAAGTCCTGCTACAAGGTATGTCAGATGCTCTTTTTTGTAAATTTACCAAAAGGTAAAACTACTGAA TTTACGCTCCTGGATTTAATGGAAGCTTAGCAGAACTGGAGAAAATTTTTGAAATTGCAATCGGGGGATCAGAAGATCAGAAGATATCTGCTGCTGCCAT TCTTTGTGGGGCATCACTAATTAGAGGATGGAACATACAGGAGTACACTGCTCATTTCATTCTTAGGTTATTATCTCCACCTGTTCCTCTAGAGAACACT GAAGGAAACAACCATTTGATTGATTATGCTCCAATACTTAATGTAATCTTTGTTGGAATTGCATCCGTTGATTGTGTTCAAATATTTTCGCTCCATGGTT TGGTTCCGCAGCTTGCATGCTCATTGATGCCAATTTGTGAAGTTTTTGGGTCATGTGTGCCTAATATTTCATGGACACTGACATCAGGGGTGCAAATATC TGCCCATGCTGTGTTTTCAAATGCATTTATTCTTCTTTTAAAGCTATGGAAATTTAATCGGCCCCCTCTTGAACATGGAATTGGAGATGTACCTACTGTT GGTTCTCAGTTAACTCCTGAATACCTACTATTAGTTCGAAACTCCCACTTAATGTCAGATGGTAACATCCACAAAGATCGAAACAGGAAGAGGCTATCTG AGATTGCAAGTTTATCATCACCAAATTCTGTATTTGTTGACTCCTTTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACACT GTCCGGTCTTGTTCATGGAACCCCTTTTCATCAAATTGTTGATGGGCTTCTTAACATGATGTTTAGAAATATTAGTAGAGGGGACCAGGTTACTATTGTA TCTGGAAGCAGTAGTTCTTCTGGACCTGAAAATGAAGATACTTTTATAGGGACAAAGTTGCCTGCATGGGATATTTTGGAAGCCATTCCCTTTGTTGTTG ATGCTGCTGTCACAGCCTGTGCTCATGGAAGACTGTCTCCTCGTGAGTTGGCAACAGGTATGTGTGTTTAGGTCAGATAAATCCAAGGGGACACACCAAG TAACTTGAAGAAGTAGTGATGTCTAAAGTACTATAGAGCTCTAACATGTTGGCAAACTATATAAATATTCGCTCAGTAGCTTAACCTTTCAAAATTATCC TTGATGTCTTCACAGCAACCAAATAAGTTCACTTAGATGTTCCTTCATGAATGCATTATCAACAATGTCATAGTATCAGATTTTTTTTCTTATTTTGTTA ATATCAGGGCTGAAAGAATTAGCTGATTTTCTTCCTGCATCATTGGCAACTATAATAAGTTACTTCTCTGCTGAAGTAACTCGAGGTGTTTGGAAACCTG TATTTATGAATGGAACGGATTGGCCAAGCCCTGCTGCAAATCTATTGAACGTTGAGGAACAGATCAAGAAGATTTTGGCTGCGACTGGTGTTGATGTGCC TAGCCTTGCTCCAGGAGGCAGCTCACCTGCCACACTTCCATTGCCATTGGCTGCTTTCACAAGTCTCACCATAACCTACAAAGTTGACAGAGCATCTGAG CGTTTTCTGAATTTGGCTGGCCAAACACTGGAGTCCCTTGCTGCAGGTTGTCCATGGCCTAGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAA AACGTTGGAGTGACTTCCTTATCTTCTCAGCTTCTAGAACAGTCTTCCTCCATAATAGGGATGCAGTTGTTCAACTTCTTAAAAGCTGTTTCACAGCTAC CCTTGGCATGAATAGCTCTCCTATCTCAAGCAATGGTGGTGTTGGAGCCCTCCTTGGCCATGGATTTAAGTCCCATTTTTGTGGAGGGATGTGCCCTGTT GCTCCAGGAATTCTCTACTTACGTGTTTATCGGTCAATCAGAGATGTTGTTTTCTTGACAGAAGAAATTGTTTCCATCTTGATGCAATCTGTGCGAGAAA TTGTATGTAGTGGTCCGTCAAGGGAGCAATTACAGAAGTCGAAAGCAACCAAAGATGGCATAAAATACGGACAGGTTTCACTTGCCGCAGCAATGACTCA GGTGAAACTTGCAGCTGCTCTTGGGGCTTCTTTAGTATGGCTATCTGGAGGGTTGGTGCTGGTTCAATTATTAATAAAAGAGACTTTGCCCTCATGGTTT ATATCTGTTCACAGATCAGGCCAGGAAGAAAAGTCAGACGGAATGGTTGCAATGCTTGCTGGATATGCACTTGCTTACTTTGCAGTGCTTAGTGGGGCTT TTGCTTGGGGAGTTGACTCATCATCATCGGCTTCAAAACGACGTCGAAAAGTCTTAGGTGTCCACATGGAGTTTCTGGCAAGTGCACTCGATGGAAAAAT ATCACTTGGCTGTGATTCAGCTACTTGGCGAGCCTATGTGTCAGGGTTTGTGAGCCTGATGGTTAGTTGCACGCCAAACTGGGTGCTAGAAGTAGATGTC GATGTGTTGAAGAGACTGAGCAATGGCTTGAGGCACTTGAATGAAGAGAAGCTTGCACTTGCTTTGTTGGGTAATGGTGGGGTTGGTACTATGGGTGCTG CAGCTGAACTCATAATTGAAAGTGGAAGGTAAGCTTATTCTCCAGCACCTGTGCCTTTTAGTATGCTTATGTACAGTAGTTTCATGTTTAAAAACTTGTG CAGTGCTAAATCTCCTCTTTTGTTTCAAAAGCATCACTTATGAGAATGGAAAATTTTGTATCTGAACTATGCTCAATCTAAGGTAACTTTCTTTCATGTT TGAAGTGATGAAACATTGCATAGGTAAAGATATGTTAAGTTTTTTATTCATTATTCTGGGGGGAAATAAAACTACCAACTATTTATGAATCTATTAGTAT TTTATTATTATATCACTCCATTGCTAAGGTATATAAGTGATTTGAAATACTGTGTATAAAGTATAATCAATGAACATAGTATTAGACTTGGGTACTATTG TGTCTGAAATGTGAATGGTATTAATATATTTCTCCAATTGTTTCTAG BLAST
Tissueflowers
Gene nameLI_gene_81282; 
Additional informationdetails; 

Expression of Ll_transcript_36946

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_36946
BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 53.98% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 69.46% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019425895.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;