Id Trinity | FTRINITY_DN58929_c2_g1_i1 |
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Name Transcript | Ll_transcript_38065 |
Sequence | GCGATGGCGGTGATGGTGGTCAACAATTATTGGGAGATGAGTACCATGGTTTGCAACGATGGAAAAGACCCACGACTTTGGATGATTCCGAAGTAACTTC GGGTGGCACCTTGATGTCGGAGGAACCCCAAAAGGATTCGTTGCTGGTGACCAGGAGAAGCTTTTACAGACTTCTCTGTCGCACATGAAAAATGTTCAAC CCAAACCACACAGCGCCTCTGCTAGGAGCTGCACTAAAGTTCATAAGAAGGGGATTGCACTTGGTAGGTCTGTGGATCTTACAAAGTTCAGCGGCTACGA TGAATTAATTGCCAAATTGGACCAACTGCTTGAATTTGGAGGTGAATTAACTTCTCCAAAAAAGGATTGGCTTATTGTCTACACTGATAATGAAGGTGAC ATGATGCTTGTTGGTGATGATCCATGGCCGGAGTTTTGTGCCATGGCCTGCAAAATGTATATCTACCCAAAAGAAGAGATTCAAAAAATGACCCCTGGTA CCCTAAGTTAAAAAAAATGAAGAGAACCAGTCAACTAGCGAAGGATTGAAGGGACTCTCACAAAACCATCCTGTTGGAGAATAAGATTATATTTCCGAAT AAACATCATGTTTTGGATTGTGTCATTGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_81291; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38065
Blastp | Auxin response factor 24 from Oryza sativa with 67.29% of identity |
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Blastx | Auxin response factor 2A from Lycopersicon with 61.6% of identity |
Eggnog | auxin response factor(ENOG4110RNJ) |
Kegg | Link to kegg annotations (4352211) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457943.1) |
Pfam | AUX/IAA family (PF02309.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |