| Id Trinity | FTRINITY_DN58929_c2_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_38080 |
| Sequence | GTCAACCACGGAGGCACTTGCTACAAAGTGGTTGGAGTGTTTTTGTCAGCTCGAAGAGGCTGGTTGCTGGGGATGCATTTATATTTATAAGAGGTGAGAA TGGGGAACTTAGAGTTGGTGTCAGACGTGCAATGAGGCAACAAAGTAATGTTCCATCGTCGGTTATCTCTAGCCACAGCATGCATCTCGGTGTACTTGCA ACTGCTTGGCATGCTGTCTCCACTGGGACAATGTTCACTGTTTATTATAAACCTAGGACCAGTCCCACTGAATTTATTGTTCCATATGATCAGTACATGG AGTCTCTCCAAATTAATTACACCATAGGAATGCGGTTTAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAAAGGTTTACTGGTACAATTGTTGGAAT TGAAGATGCTGACCCTAAAAAGTGGCCTGATTCCAAATGGAGAAGTCTCAAGGTTAGATGGGATGAAACGTCTACCATACCTCGTCCTGATAGAGTTTCT CCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAACTCTAAATCCTCTTTCAATGCCTAGACCTAAAAGGTCTCGGCCTATAGTGGTTTCACCATCCTCAG ATTCATCTGTTCTTACTCGAGAAGGAGCGTCATCTAAAGTGAGCGAAGACCCTTTGCCTGCAAGTGGATAGCCAAGGGTCTTGCAAGGTCAAGAATTGTC GACCTTGAGAGGCAACTTGGTAGAAGGCAACAAGTCTGATAATGTCGAGAAGTCTGTTGTTTGGCCACCTACAGTTGATGATGAGAAGATTGATGCTGTT TATACTTCAAGAAAATATGGATCAGAGGGATGGATGTCGATGGGGAGACTTGAAACATATTCAAATCTACTTTCAAGCTATGGGACCAGTATAGATATTT CTTCACATCTATCCTTGCTTAATCAAATTGGCCATGTAGCTAACCCTGCTAAGAAACATTTGGTGGATCGTGAAGGAAAAGTTAATGTGATGGGTAGTCC ATGGTCCGTGATGCCCTCTAGTTTATCACTCAACCCCGTGAACTCTAATGCAAAAGGTGTGCAAGGTGGTGATACAACTTATCAAGTTCGGCGGAATTCA AGGCATAGTGCATTTGCTGAATATCCTTTACTTCATCATGGTCATAAATTTGAGCATCCAAATGGAAACCTAATGATGCTACCACCACCAACAACTCAAT ATGAGAGTGCCTGTTCTAAGGAACTGTTTCTGAAATCAATATCACCCAATACTTCTGAAGTTGCAAAACCAAAAGATGACAACTGTAAGCTATTTGGCTT CTCACTTCTCAGTAGCCCAACTGCATCGGGTACTTCTATGTCGCATAGAAATGTAGTCAATGAGCCACTTCGTGCCTTGCATCTTCCATCACACCTACAT CATACTTTCGAGAATGACCAGAAGTCTGAACATTCGAGGGGTTCCAAACCTGCGGATGTTGTAGTTGTTGCTGATAACCAGGAGAAGCTTTTACAGACAT CTCACTCGCACTTGAAAAATGTTCAATCCAAACCACACAGCACCTCTGCTAGGAGCTGCACTAAAGTTCATAAGAAGGGGATTGCACTTGGTAGGTCCGT GGATCTTACGAAGTTCAGTGGCTATGATGAATTAATTGCCGAATTGGACCAACTGTTTGAATTTGGAGGTGAATTAATGTCAGCAAACAAGGATTGGCTT ATTGTCTATACTGATAATGAGGGTGATATGATGCTAGTTGGTGATGATCCATGGCAGTAAGGATCTGTTTTTATTAGTCTTTGATTAGGCACTTACATTG GTTGTTTTGTTTTCCTTAGGGAATACATTGGTTGTTTTGTTTTCCATGGCAGTAAGGATCTATTTTTATTAGTCTTTGATTAGGCACTTACATTGGTTGT TTTGTTTTCCTTAGAGAATATATAATTCATTATTCCGTGTTTCATTCAGGGAGTTCTGTGCAATTGTTCGCAAAATTTATATCTACCCTAAGGAGGAGAT TCAGAAAATGAGCCCGGGGACCTTGAGTTCAAAATATGAAGATATTCAGTCAGCTAGCGAGGGTGCAGATGCAAATGAAGTTGAAGGTGCAGATGCAAAC GAAGTTAAAGGTCAGATGAATCAGAAGTTAAATTCTGAAAATGGCGTTGACACCTGATAGTTATTAGATTGATCCCCATAGCCTCGAGGCTGTAAAGTAT GGGACTACTGTCACGAAGCTGTCCATCCAGTTGGACAATATGACCTTAAAAGATGAAGTGAATCAAGTGACTATTTTGAATCAGAGTGTTGGATGGACCC TGGTATTATTATTTATTAGTAGTTTATGTTTTCGTCTATAGTTAATGCTAAACAATCCTAGTATGTAGTCATTGTGTTTTTTAACAAGGTGGTTTGTGAT AAGATAACCATCCCACCTAGTCGTATTGTACAAAGTTGTTTCCCTTGTATCTTGAACACATTAATCTAATGAAGTTCATATGGTTGGTAACCTGTTTTCA TTTTTAATATCTCTTCTAAACCATAATTTGAGGTAAAAATTATTGTGGATACACATTTCAATTTTGCTGGAATTGCACTGAAATTTTCTTTAGCCACCGA TTCCGTGATTAGCATTGGAATGATAGTTTCATATAAGACTCAATTTGGAACTGAAGTCATTAAATCATTCAAAGATCTTACTTTTTTAGTGAAATGCATC TGTGGAATGCTTGATATTCACTAGTTGTGGTGTGGTCCTGGTGTCCTTGGATACTTGTGGTGATTAGGTGATGAAGGCTCCTAGGATGCTCCACCATTTA TGGTCAACAGTGTTTCTGAAAATAATACTGCTATAATGGCACACTACTGGACCACATTTTTCCCAGTGGTCCATCTGCTATAATAAGCCTTAGGCTCATT GAATTCATCATTTTGATTTGATATTAGTGGATGCTTACTGTGGTTTGTGGTTGATTAAACTTTTTGTTTTGCTAATTTTTCTACTGATGTGTGTGATCAT CTTTTCTTCTATTTTTGTTGGTTTGAAGGGGGAGTCATATTAAACGTGTGGTGAGCATGGTTAATTGTGGGAAAACAAAGGAAAAAGTTGCTTTGAAGTT TTGTCCCTTTTGAAAACTGACCAAGGGACAGGGACAGGGACTTGGACATGCGAGAGAACATATTCTCCCCTATGCTTTGTGGCACTCCATATTACAACCA TCATCTGTCCTATAATTTCTTTTTCCTTCCCATATCTTTATGCAATTAAACCTTATAAAATAATATTAAAATATTAATTTTAGTTTTTTATTTTTTCATT AAATGATACTTTTTAATTGGTTTGGGATACGGTGTGAGATATGTTATCTCCATCTCCAGTGATCAATTTACTCAAGAGTAAGTTTCTCATCTTAACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81291; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38080
| Blastp | Auxin response factor 2B from Lycopersicon with 45.13% of identity |
|---|---|
| Blastx | Auxin response factor 2 from Arabidopsis with 57.96% of identity |
| Eggnog | auxin response factor(ENOG4110RNJ) |
| Kegg | Link to kegg annotations (101249712) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457943.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |