| Id Trinity | FTRINITY_DN58936_c1_g6_i5 |
|---|---|
| Name Transcript | Ll_transcript_39398 |
| Sequence | ACAGTATACGGACCTGCAGGTCAATGGTGTTCCTGTTCGTGCAATTAACAGACCTGGTTCACAATTGCTTGGGGCTAATGGTCGTGATGATGGTCCAATT ATCACGCCATATACAAAAGATGGAATCAATAAGATTTACTTAACAGGATGTGATGCTCGTGCTTTTTGTTTAGGGGTCCGTATTGTTAAAAGGCGCAGTG TGCAACAGCCTTGTAGTATTGGAATAATGAAGTATGGTGCTAAGTATCTCCCCTGTTTGAAGTTATTCCAGAGTTCTTGAGATTGGCCCTGTCTGATTGA TTTCTTGAAATTTTATGAAGCCTGGTCCTAAACATAATTCCGAAGGAGCCTGACGGTGAGCTTTTTGAAGATGCCCTTGCACGTGTCTGTCGATGTGTTG GAGGTGGAAATGCAGATGACGTTGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTTACCATTAACCTCCGTTGTCCAATGAGTGGTTCAAG AATGAAGATCGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGGTCAAGGAAGTGGCAATGC CCCATATGCCTAAAAAACTATGCTTTGGAGAATATCATCGTTGATCCTTATTTTAATCGAATCACTTCTAAGATGATACATTGTGGCGAAGAGGTTACAG AGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCTAGAGATAGGGAATCTTGCACAATGGCACTCTCCTGACGG ATCCCTCTGTATTTCCAATGATAGAGAAACAAAATTGGAAACATTGAAGCAGGTCAAACAAGAAGGTGTTTCAGGCTCTCCTACTGGTTTAAAAATTGGC ATAAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACTAACACTTCTTCTGGCAATAGATTGAAAGGGGACTTTGGAAATCATGAAC AAGTTGTTATTCCAATGAGCAGCAGTGCCACTGGAAGTGGTCGGGATGGTGATGATCCTAGCGTAAATCAGGGTGGTGGTGGACATATTGATTATTCTAC TACCAATGGGATTGAGTTGGATTCTCTGTGTCTCAGTAGTGCTGCTTTGACATATGGATATACTGCACATAATACTTCTGCTCAAGCGGTTGCTGCTGAA GTTATTATTCTGAGTGATTCAGATGAAGACAACGATATGCTGATATCTCCTACAATTGCATATAAGAATAACCAAGCTGGTGCTGCAGGAGATAGTTACT CAGTGCCACCACCTGGAATTGTTGATTCATACACTGAAGATCACAGTCTTGGTGGAAATTCATGCTTGGGACTTTTTCCTAACGAAGATGATTTTGTGAT GCATTCCTCTCTATGGTCGTTGCCGTCCGGAACACAGGCTGATCCTGGATTCCAATTCTTTGGTTCTAATGCAGATGTATCAGATGCTTTGGTCCATTTG CAGCATGGTCCTATTAATTGCTCTTCATCATTGAATGGCTATTCATTGGCTCCTGATACTGCTCTGGGATCTAGTACTCTCATACCAGATTCCTCTGCTT GTCGGTCTGATGCTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGCTGGAGATGACCCCTCACTTCAGATTTTTCTCCCCACGAGACCAGC AGAATCATCAGTTCAGCATGGATCAAGAGATCAGACAAATGAGTCTAATGGTGTCTGCACTGAGGATTGGATATCTCTTAGTCTTGGAGGTGGCGCTTCT GGCAGTAATGGCAATGCTTCCACTCAAAATGGATTTAATTCTGGCCTTCAAGTCCCAACCAGAGGACCTTCCACAAATAATATGGCTGATACTGCATCTT TGCTTCTTGGAATGAATGATGATAGACCCGACAAAACAAGTAGACCAAGATCAGATAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81365; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39398
| Blastp | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 58.87% of identity |
|---|---|
| Blastx | E3 SUMO-protein ligase SIZ1 from Arabidopsis with 60.18% of identity |
| Eggnog | Protein inhibitor of activated STAT(ENOG410XQ2E) |
| Kegg | Link to kegg annotations (AT5G60410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448718.1) |
| Pfam | MIZ/SP-RING zinc finger (PF02891.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |