| Id Trinity | FTRINITY_DN58943_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_37859 |
| Sequence | AAACGACGATGATGGTTGAACCTGAAAGCACGTATCAATAACTATAATCCTTTATTAAAAAAACCGGGAACCGAACCCAATACTGAACCGGGTTTTATTC ATCTAACCCATCTCAAATATCTCCATTTCTCAAATCATTTTCGGTTTTCTTTTCTCTTCGGTGCGATCGCCACACTAGATTTTGATCGTTGCTCCATAAT TTTTTACTTGAATAAGCGGTTTGCGAGAAACGTTTGGTGGTAGTGATTATTGAGCTAGAATTTTATGTGTTATAGAGTGATGGAGCATGCTTGCTTAACA CTATCTACATAGCAAGATTTTCTTGCTCCTGACTATAAGAGGAGCAATCTCAACTATTGAACTTTTTGGTAAGGGAGAGGACAGGTTAATCTTGTGCTAT GCCTTCCCTTCAGCTGTTGCAACTAACTCAGCATGGCCAGAGTTTTCTGGCTTCAAGGAGGAAAACATTACTACTTGCAACTGGTATCTTAGCTGCTGGT GGAGCAGCTGCATATATGCAATCAAGGTTTAGAGTTAGTAAACATGATTTATTAGGCCATTGCAATGGGCACAACAATGGTAAAGAAGTCACGAAGGATG ACATTGAGAAGGATGCTGCTGCGTCAAAAAATAAACAAAAGAAAGGGGGTTTGAAGTCACTTCAAGTCCTTGCTGCAATTCTTCTATCTGAGATGGGCCA ATTAGGTGCAAGGGACCTTTTAAGTTTAGTTGGCATAGTGGTGCTGCGAACTGCTTTGAGTAACAGGCTAGCAAAAGTGCAAGGCTTCCTCTTTCGTGCT GCTTTTCTTCGACGTGTGCCATTGTTTTTTTCGGCTAATTTCAGAAAATATTCTTTTGTGCTTCCTCTTATCAACCATTCAGTCGACGTCAAAGTACATA TCTGGGACTTTGAGTCTGCATTTCAGAAAAATATTGACAAAGCTTATCCATTCCCACTATTTTGAGAACATGGTGTATTACAAAATAGCACATGTTGATG GTCGGATAACTAACCCAGAGCAAAGAATTGCCAGCGATGTGCCAAAGTTCTGTTCAGAGTTGAGTGAAATTGTACTAGATGATTTAACAGCAGTAACTGA TGGACTTCTATACACTTGGCGGTTGTGTTCATATGCTAGCCCGAAATATGTCTTCTGGATATTGGCTTATGTACTTGGAGCTGGGACTGCAATCAGAAAT TTCTCTCCCTCATTTGGGAAACTTATGTCCAGAGAGCAGCAATTGGAAGGAGAGTACAGACAGCTTCACTCACGGTTAAGGACTCACTCAGAAAGTATAG CATATTACGGTGGAGAGAGGAGAGAAGAATCTCATATTCAACAGAAGTTTAAGGCCTTGGTTAGGCACATGAAAACTGTGCTTCATGACCATTGGTGGTT TGGCATGATTCAAGACTTTTTGTTGAAATACCTTGGTGCTACTGTTGCTGTTATTTTGATAATCGAGCCTTTCTTTTCGGGTCATCTAAAGCCTGATAGT TCAACTTTAGGGCGTGCAGAGATGTTGAGCAATCTAAGATATCATACTAGTGTCATAGTTTCCCTATTTCAGTCTCTAGGAACACTTTCTATCAGTGCAA GACGGCTCAATCGTCTCAGTGGGTATGCCGATCGCATTTATGAGTTAATGGCCGTATCAAGGGAGCTAAGCTTGGTGGATGAGAATCCTTCTCTGCAAAG AAAGGGAAGTAAAAATTGCATAAGTGAAGCTAACTACATTGAATTTTCTGGAGTCAAGGTTGTGACCCCCACTGGTAATGTCTTGGTGGATGATCTTACC CTTAGGGTTGAGTCAGGCTCAAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGTTCGCTTTTCCGTGTTCTAGGTGGTCTTTGGCCATTGATAT CTGGATATATTGTGAAACCTGGCATTGGTTCTGATCTTAATAAGGAGATTTTCTATGTACCACAAAGACCATACACTGCTGTAGGAACCCTTCGTGATCA GCTAATTTATCCTCTTACTTCAGATCAAGAGGTTGAACCACTTACAGACAGTGGGATGGTGGAACTATTGAAAAATGTTGACCTTGAATATCTGTTGGAC CGTTACTCACCTCATAAAGAAGTAAATTGGGGTGATGAACTTTCATTGGGAGAGCAGCAGAGGTTGGGCATGGCTAGACTTTTCTACCATAAGCCTAAAT TTGCAATTCTTGATGAGTGCACAAGTGCTGTGACTACTGATATGGAAGAAAGGTTTTGTGCTAAAGTTCGGGCCATGGGAACATCATGCATTACCATAAG CCATCGTCCAGCATTAGTTGCATTCCATGATGTGGTTTTATCCTTGGATGGCGAAGGAGGATGGAGTGTTCATTATAAAAGGGAGGACTCTTCTACTGAA ATGGGGATTGATACGATGAAGGCATCAGAGACAAAGCGCCAGAGTGATGCCAAGGCAGTTCAACGAGCATTTGCCATGAACAAAAAGGATTCTGCATTTT CAAATTCAGAGGCACAGTCGTATGTAGCAGAGGTGATAGCATCATCTCCATCCATGAATCATTCTATTTCACCATCTGTTGTTACCCAAATCCGTGGTAA TACAAGAGTATTGCCATTGAGGGTGGCTGCAATGTGCAAAGTATTGGTGCCCACCGTGCTTGATAAACAGGGTGCACAACTGCTTGCTGTTGCTTTTCTT GTTGTTTCGAGAACTTGGGTCTCTGATCGTATTGCATCACTGAATGGTACCACTGTGAAGTTTGTTTTGGAGCAGGATAAAGCGTCCTTTATTCGGTTAA TTGGTCTAAGTGTTATCCAAAGTGCTGCTTCTTCTTTTATTGCACCTTCTATAAGACACTTGACAGCCAGGCTGGCCCTTGGGTGGCGTATTCGTTTGAC ACAGCATCTACTCAAAAACTACTTGAAAAACAATGCATTCTACAAGGTCTTCAACATGTCAAGCAAAAATGTCGACGCAGATCAGAGGCTAACTCATGAT TTGGAGAAGTTAACAACAGACTTGTCTGGACTGGTCACTGGATTAGTAAAGCCATCTGTGGATATTTTGTGGTTCACATGGAGAATGAAGCTGTTAACTG GTCAGAGAGGAGTTGCCATACTCTATACTTACATGCTACTTGGTCTAGGATTTCTTAGAATTGTTACACCTGATTTTGGTGATTTTATGAGCCAAGAACA AGAACTTGAAGGAACCTTTAGGTTCATGCATGAAAGACTATGTACTCATGCTGAATCTGTTGCTTTCTTTGGCGGTGGTGTCCGAGAAAAAGCTGTGAGC ATCCCAACTCTACAATATTATTGTCTTTTCTTTAAGGCCTGCTTTTGAGAAAGGGAAAAATTAGAATGAAAATTACTCTGCTCTTGCTTGACACAATAAA AATGTGGATGGTTGATAAGTAAAACCATTCACACTACACATCAAATTTTGGACGTACTGTGTATTGAATGGTTGCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81418; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_37859
| Blastp | ABC transporter D family member 1 from Arabidopsis with 82.65% of identity |
|---|---|
| Blastx | ABC transporter D family member 1 from Arabidopsis with 81.26% of identity |
| Eggnog | (ABC) transporter(COG4178) |
| Kegg | Link to kegg annotations (AT4G39850) |
| CantataDB | Link to cantataDB annotations (CNT0000069) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415077.1) |
| Pfam | ABC transporter transmembrane region 2 (PF06472.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |