Ll_transcript_36920

• Id Trinity: FTRINITY_DN58949_c1_g1_i4
• Name Transcript: Ll_transcript_36920
• Sequence: GCTCTTGTCGGAAGTAGATATAGAGTCTCTCTCTCTTTCTCTCTCTCCCTGATTCTAAGTTCTTTTTTTTGTTTCGTGGGTTTTCTCCAATCCATGTTTA GTGGTTATCTTCAAAGAAACTATGAAAAGATGAAGGCTTTATACTAGGATTCAAATGATGAAAACTTGTGTCTGAAATCAAATCATTTAAGGGAATGGTT TTACCCTTTTCTTGGGTTTTCTTTTATGTTAAACTGTCGTACTTTTGTTGCTTAGAAACTTGAGGACTGCATAGTTGTTTCATTTTCTCTGTCTTCTTTG TTTTGTTGATTAAACATTCTGAGGAACTCATTTTGTAAATGGCCTTCATGTCCTTACATGTTAGTGCCAAGTACTGTGTTGATTACTTTCTCTGCTTTTC TTTTTTACTGTTTTTCTCTTATTGTGGCCCTTGCAAGCCAAAAAAAGAATCTTATAGACCCTAAGAGAATTATTAAGAGAAGAATGAGGATCCTACTGGG TTTATATTTGAAATTTTGAATAGATGAATATCTCTATCCTTTCTCTTTATTGATTTTCAACATTTTGAGACTCTTTGCTATTGATTTGATGAAGATGTAA TCTTTTGAGAAAACACACCCTTATTCTAAAACCCAAAAATGTTTTCAAGGCAATTTCCTCTGTTAAACTATTTTCTTGGAAAATTCTATTCTGCAAACTC GTCTGTATGCTATAATCAGTGTATGCTATAATCTGCATGTTTCTTGTATCGGATACACTGTATGGGTTACAGATCTCGTTCTTGATTATTAATCAAGAAT GTTTGGTCTTGATTAATTGAAACTATGGTGCAAACTGAACATTGGCAAGGCAAGAAAAATTCTTCATTATGTGAAATTGGTTGGTGACCCAAACTATAAA TGAAAAATGCTTGATGTAAAAGCAACAACCGTGCGGAATCTAACACCTGGTTTGTTCTGGAGTGCTTCCTACACTTTATTGTGTACCCTGCAATGATCTC ATCCTAGCAAATAGGTGTAAGAGAATGCTTTTGTTTTCATCAGCAATTGTTACTGAGGAATGAAGATGCTCATTAAGATAAGACATTTGTTTTTCAGCAC TGCTTTAAATTTTGCACAACTATTTTATAAGCTCGAATAATGTATGGACTTCAAGTATCCCTCCATACTTCAGATTGGTTTTGAACTAGTTTTCTTCTCT ATTATCTTCTTTTTGGTGGATCTCTTTTGCACTGTTTGTAATATCTAAAGGCATGTTGTTAGAGCATTAAAAGAAATCCAGTTGAAACAGTAGGAAAGAT TGTTGTTATTTTGGTGGATCACTTTATCCACACATACATTGCTTGTTTATTTTTGGCTTGCACCAGTCAGAAAAAAAGGGAAGTGTGATTCAATGATTTA CTTATCTGTTTTGTGCAACTAAGTCTTGGAGTTTTTTGGCATGACAATATAGACATGTTGGGGTTAAGGAGGGTTATATGCAGAGAGGCATGGATATTGG AAGAAAGGATGCAACATGTTACAAGCACAGAGATGAGAGGAGACAAAATTCAATGCTGCTAATGACTTCATAAGATGTTTTTGGATTTTTATTTCAAGGA GGAGCTCCATACTTTATGCCTAGAAAAAAGTAGTTGCACTTTCCAGCCATATATATAAACTTGGTAAATTAGACTTACATTATCAAAATGCATCACCCTA AAGCTCCATTAACTTTTAAGGAGGAAAATATGTTTGTGGTTATCTATCTTAAACCACACGTATCCTTTAATTGATAGAGGCAAAACAATTTTACTTGAGC CCAACATAATCACAGTGAAAGGAAGTTTTTTAAGGGGTGAAGTAGAATTCCAGGAACTCCAACTGAAAAGTAGAAGTCAATAGTTAAGTCAGTACTAGGT ATCAATTTTAATGTGTTAGGTATGTATCGGTTTGTCGTGAAAGAAGGAGAAGAAGAAAGATGAAGAGACTAGGATTATTTAGTCTTATCTTCCATTGTGG AAGGAGTACTTGTCAGTGAATGGTGCCACCACCATTCCAAGTCTTGGTCTGTTAGCTTGCATGTGCTCAATCCACTGTTTCTAGTGAGTTTAAGAAAATC ATTTTTCAGTCCCTGTTTTTGCTTCATACTCAAAATCATATATATGCTTCTAAGCTTCTTCATTTTTTTAACAGAGATCGTTCGTTCAATTATTTCCATC AGATAAATGCAAGAATGTCTATATTTTCTAAGCAGCAATGAGTAGAATCATACAAGAAAAGGAATACTTTTGAGTATATCTGCCCTGATTTATGATAAAC TTGCATTCTTAGTATGAAGTAGTCAGCAGCAGTTAAAAATAAGAAAGTCAAGATTCTCATCTATTTGTGTTTTTACTCAAATAAGAGTTTTTTTGGCATG TCCAAAAGAGACAAGATTGTTGGGGCAATATGCTTTGGTAAAAGTCCTACTTCTTCAGTCTGTTCTTGTTGTGTTCCTTGCTCAATGTATCTATCAGGAA GCATCATTAATCTCCACTATAGGAAAGGCTCAAGAGAGAATTAGAACTAAAAAATAGGGGCATTCTAGCCGGAATGAAATCATGGGAAAGGTGAATCATT TACACAAAGGTACATTTACCTTCAGAGATCCATCCAGCATACCATATATGCTTAGGTACGTTGAAACATGTGATCCAAAACCTCCAATAGAACCCTCTTC CACTGTGATGAGAAATTCACGCTCTAGCTAATTGCTTAATGAGATCAATATCCAAAGGTTTGCAAAACCTTGCATCAGAAACTTGTCACAGAAATGTCTA GTACTTTGAGCATCTAGGCAGCTTGCAGGCATTGTTGAACTATGGAACCATATCCCAAAATAGCAACCATGTTATATCTTCTATCACAATTCTTCCCTTT CCTATCTAAATAACCAAAACTTTACCATTTGATTTACTTATATAATCAGCATTGTATATAGAAAATTTGTGTTAGTTACTAGTGCTAACCTCAATCGGGA TTCCTTTTTTATTGAGTTTGGGTTATGCCCGACGTGGTCTTGAATGGACAGCTTTAGAGGTTTTTGGATTCCAGCCTAATGAGTGTAATCTTGATAGCAT CGTGATTAGTTGAGTTAGTCTTTGGGGATTTAGCTAATTGTCAGTTGATTCATGGTGGTCTTCACAGATGGTGTGACATTTATCGGCATTGTTTTGGAAT GAAACAATGCAGGGTTACTGAAGAAGAATGTCAAATATTTGCCTCGAGTAGGAACAATCAAAATATTGAGTTGACAGGAGGACCATTTTGCTGGTATGAT AGATTTGCTGGGCATTCTAAGCGACTTTAAGAGGCTGCAATGCTGATAGAGGAAGTGAGAAACTTTGTGAAGGACTCTTCGAATTGTGTGTAGGATTTCA TGGAGAGGCAGAAAGAACTATGTGAAGTCAGAAAAGCCCAAGATCTTGCTCCTGAGGATGGGGAACTCATACCCTCTTGGCAAATCTTTATGCTTTAGCT GGGAAATGGAAGCATGTGACTGAGATGAAATGCACAATAAGAGGATATGAACTTGAAGATTAATCCTGCAATGAACTTGGTTGATGTTGATAGAGATTTT TATAGTTTTTTAGGTGGAGATTTGTCATACCCAAGAGCTCAGATTTTTGAATGTTGTATCAATTAATAGAGAGCAGGCTGCTAACACTGTTCGTTTTAAT CCTGATACCGGATTTGTTTCTTTACTTATACAGAAACCGTTGCCGGAGATGAGAAGAGATTCCATCATTCTAAAGCTTGTCATTGTTCCTGTAAGGTAAC ATGCGTGACCATTCATATAATTCTAGCCCATTCTATTTCCCTTAGCTGAATGCATGAGTGTGATTCATAACTATGATTCCTTAATTTGTTTTCTTAGCAA AAACGAAAAAACTATAAGATAAAAGGAATACTTTCGATTA
• Tissue: flowers
• Gene name: LI_gene_81475;
• Additional information: -

Expression of Ll_transcript_36920

FPKM

• FPAB: 0.7
• FPNAB: 0.1
• LF1: 0.3
• LF2: 0.1
• LF3: 0.2
• LF4: 0
• UF1: 0.1
• UF2: 0.1
• UF3: 0.2
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_36920

• Blastp: -
• Blastx: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Arabidopsis with 72.73% of identity
• Eggnog: Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity)(COG1154)
• Kegg: Link to kegg annotations (AT4G15560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426490.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;