| Id Trinity | FTRINITY_DN58949_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_36923 |
| Sequence | GCTCTTGTCGGAAGTAGATATAGAGTCTCTCTCTCTTTCTCTCTCTCCCTGATTCTAAGTTCTTTTTTTTGTTTCGTGGGTTTTCTCCAATCCATGTTTA GTGGTTATCTTCAAAGAAACTATGAAAAGATGAAGGCTTTATACTAGGATTCAAATGATGAAAACTTGTGTCTGAAATCAAATCATTTAAGGGAATGGTT TTACCCTTTTCTTGGGTTTTCTTTTATGTTAAACTGTCGTACTTTTGTTGCTTAGAAACTTGAGGACTGCATAGTTGTTTCATTTTCTCTGTCTTCTTTG TTTTGTTGATTAAACATTCTGAGGAACTCATTTTGTAAATGGCCTTCATGTCCTTACATGTTAGTGCCAAGTACTGTGTTGATTACTTTCTCTGCTTTTC TTTTTTACTGTTTTTCTCTTATTGTGGCCCTTGCAAGCCAAAAAAAGAATCTTATAGACCCTAAGAGAATTATTAAGAGAAGAATGAGGATCCTACTGGG TTTATATTTGAAATTTTGAATAGATGAATATCTCTATCCTTTCTCTTTATTGATTTTCAACATTTTGAGACTCTTTGCTATTGATTTGATGAAGATGTAA TCTTTTGAGAAAACACACCCTTATTCTAAAACCCAAAAATGTTTTCAAGGCAATTTCCTCTGTTAAACTATTTTCTTGGAAAATTCTATTCTGCAAACTC GTCTGTATGCTATAATCAGTGTATGCTATAATCTGCATGTTTCTTGTATCGGATACACTGTATGGGTTACAGATCTCGTTCTTGATTATTAATCAAGAAT GTTTGGTCTTGATTAATTGAAACTATGGTGCAAACTGAACATTGGCAAGGCAAGAAAAATTCTTCATTATGTGAAATTGGTTGGTGACCCAAACTATAAA TGAAAAATGCTTGATGTAAAAGCAACAACCGTGCGGAATCTAACACCTGGTTTGTTCTGGAGTGCTTCCTACACTTTATTGTGTACCCTGCAATGATCTC ATCCTAGCAAATAGGTGTAAGAGAATGCTTTTGTTTTCATCAGCAATTGTTACTGAGGAATGAAGATGCTCATTAAGATAAGACATTTGTTTTTCAGCAC TGCTTTAAATTTTGCACAACTATTTTATAAGCTCGAATAATGTATGGACTTCAAGTATCCCTCCATACTTCAGATTGGTTTTGAACTAGTTTTCTTCTCT ATTATCTTCTTTTTGGTGGATCTCTTTTGCACTGTTTGTAATATCTAAAGGCATGTTGTTAGAGCATTAAAAGAAATCCAGTTGAAACAGTAGGAAAGAT TGTTGTTATTTTGGTGGATCACTTTATCCACACATACATTGCTTGTTTATTTTTGGCTTGCACCAGTCAGAAAAAAAGGGAAGTGTGATTCAATGATTTA CTTATCTGTTTTGTGCAACTAAGTCTTGGAGTTTTTTGGCATGACAATATAGACATGTTGGGGTTAAGGAGGGTTATATGCAGAGAGGCATGGATATTGG AAGAAAGGATGCAACATGTTACAAGCACAGAGATGAGAGGAGACAAAATTCAATGCTGCTAATGACTTCATAAGATGTTTTTGGATTTTTATTTCAAGGA GGAGCTCCATACTTTATGCCTAGAAAAAAGTAGTTGCACTTTCCAGCCATATATATAAACTTGGTAAATTAGACTTACATTATCAAAATGCATCACCCTA AAGCTCCATTAACTTTTAAGGAGGAAAATATGTTTGTGGTTATCTATCTTAAACCACACGTATCCTTTAATTGATAGAGGCAAAACAATTTTACTTGAGC CCAACATAATCACAGTGAAAGGAAGTTTTTTAAGGGGTGAAGTAGAATTCCAGGAACTCCAACTGAAAAGTAGAAGTCAATAGTTAAGTCAGTACTAGGT ATCAATTTTAATGTGTTAGGTATGTATCGGTTTGTCGTGAAAGAAGGAGAAGAAGAAAGATGAAGAGACTAGGATTATTTAGTCTTATCTTCCATTGTGG AAGGAGTACTTGTCAGTGAATGGTGCCACCACCATTCCAAGTCTTGGTCTGTTAGCTTGCATGTGCTCAATCCACTGTTTCTAAGATCGTTCGTTCAATT ATTTCCATCAGATAAATGCAAGAATGTCTATATTTTCTAAGCAGCAATGAGTAGAATCATACAAGAAAAGGAATACTTTTGAGTATATCTGCCCTGATTT ATGATAAACTTGCATTCTTAGTATGAAGTAGTCAGCAGCAGTTAAAAATAAGAAAGTGAGTAGATGAATATGTTATTTGTTTACCTCACTGATTATTATT TTTAAATATTCTCATTGCCTAAAATGTGCTTGTTAATATGGACATTGTAAATATAGGCTTTGACGCGGAGTTAGTTTTAAACTTCTGAGTTTCTACTTGT ATTTGTTTAAGGGAATCTTCCAAGCATGTAATTGTTTCTCAACTTTAAGCTACACTACTTGCCAGTCTGTGTCAATATGAAAGGAGTCTCTAACTTGAAT TGAAAAGAATTGATTGAGTAATAATATGTTGACACTTTCCATACTGATGTTACAATCTTTACAACATGGCTTTAAGTTGATATCAAGACATTGTATGTGA TTTGTTTCAATGAAATATTTACATGATTTCTAGACTAAAATAGGTCACTTATTGGTTACAAGATTCTCTTATTTCGTAACATGATTTGACCAGGGTACCT ATTTATTATCATCTATGAAACAAATATGAAGTCTTCTAACATTATTATTCTTCTTCCAAGTCCCAGGTCAAGATTCTCATCTATTTGTGTTTTTACTCAA ATAAGAGTTTTTTTGGCATGTCCAAAAGAGACAAGATTGTTGGGGCAATATGCTTTGGTAAAAGTCCTACTTCTTCAGTCTGTTCTTGTTGTGTTCCTTG CTCAATGTATCTATCAGGAAGCATCATTAATCTCCACTATAGGAAAGGCTCAAGAGAGAATTAGAACTAAAAAATAGGGGCATTCTAGCCGGAATGAAAT CATGGGAAAGGTGAATCATTTACACAAAGGTACATTTACCTTCAGAGATCCATCCAGCATACCATATATGCTTAGGTACGTTGAAACATGTGATCCAAAA CCTCCAATAGAACCCTCTTCCACTGTGATGAGAAATTCACGCTCTAGCTAATTGCTTAATGAGATCAATATCCAAAGGTTTGCAAAACCTTGCATCAGAA ACTTGTCACAGAAATGTCTAGTACTTTGAGCATCTAGGCAGCTTGCAGGCATTGTTGAACTATGGAACCATATCCCAAAATAGCAACCATGTTATATCTT CTATCACAATTCTTCCCTTTCCTATCTAAATAACCAAAACTTTACCATTTGATTTACTTATATAATCAGCATTGTATATAGAAAATTTGTGTTAGTTACT AGTGCTAACCTCAATCGGGATTCCTTTTTTATTGAGTTTGGGTTATGCCCGACGTGGTCTTGAATGGACAGCTTTAGAGGTTTTTGGATTCCAGCCTAAT GAGTGTAATCTTGATAGCATCGTGATTAGTTGAGTTAGTCTTTGGGGATTTAGCTAATTGTCAGTTGATTCATGGTGGTCTTCACAGATGGTGTGACATT TATCGGCATTGTTTTGGAATGAAACAATGCAGGGTTACTGAAGAAGAATGTCAAATATTTGCCTCGAGTAGGAACAATCAAAATATTGAGTTGACAGGAG GACCATTTTGCTGGTATGATAGATTTGCTGGGCATTCTAAGCGACTTTAAGAGGCTGCAATGCTGATAGAGGAAGTGAGAAACTTTGTGAAGGACTCTTC GAATTGTGTGTAGGATTTCATGGAGAGGCAGAAAGAACTATGTGAAGTCAGAAAAGCCCAAGATCTTGCTCCTGAGGATGGGGAACTCATACCCTCTTGG CAAATCTTTATGCTTTAGCTGGGAAATGGAAGCATGTGACTGAGATGAAATGCACAATAAGAGGATATGAACTTGAAGATTAATCCTGCAATGAACTTGG TTGATGTTGATAGAGATTTTTATAGTTTTTTAGGTGGAGATTTGTCATACCCAAGAGCTCAGATTTTTGAATGTTGTATCAATTAATAGAGAGCAGGCTG CTAACACTGTTCGTTTTAATCCTGATACCGGATTTGTTTCTTTACTTATACAGAAACCGTTGCCGGAGATGAGAAGAGATTCCATCATTCTAAAGCTTGT CATTGTTCCTGTAAGGTAACATGCGTGACCATTCATATAATTCTAGCCCATTCTATTTCCCTTAGCTGAATGCATGAGTGTGATTCATAACTATGATTCC TTAATTTGTTTTCTTAGCAAAAACGAAAAAACTATAAGATAAAAGGAATACTTTCGATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81475; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_36923
| Blastp | - |
|---|---|
| Blastx | 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic from Arabidopsis with 72.73% of identity |
| Eggnog | Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity)(COG1154) |
| Kegg | Link to kegg annotations (AT4G15560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426490.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |