Ll_transcript_39465

• Id Trinity: FTRINITY_DN58957_c0_g6_i1
• Name Transcript: Ll_transcript_39465
• Sequence: TTTCCTTCTGACCCATCAAACAAAACTTTCCACTTCTTGCACACTTTAGTCAAAGGGCGCCAAAAAAACCCTCTCTCTCCCAAAATTTGTGTTCTCCCGC CAACACTGAAGAAAAAAACATCTCAAGAGGACAAGAACACTAGAAATATCCAGCATACCATTTTGCTCCTACATTTCCTCTTTTCACTCTCTCAATAGAA AGTTTCTTTGGTGAAAAAGGAAGGGAGTTGAAGGCACAATATGGGTTCAGCTTCACTTCAAGATTCATCTCAACCATCCAAATGTTCCGATCCAGGTGTT AAGAGCAGCCAAGAGAAGAAGAAAACTGTTGATTGTGAAACTAAAGAGGAAGTTATGGCCCGAGGTAAACAAAAGAAGCGAAGCTTACCAGAAAAGAGTG AGCAGCCAACTGGTACTCGCAAAATGCCAAAACGAGCTGTGGCAAGTAAAAATATGAAGGAGAAATCATTTTCCATACCTGGGAAATCTTGTCTTATTGA GACAAAGAAGGATCAAATTGTAGATGAAGAACTTCTTGCTATCCGCCTGACTTCTGGACAGGATGATGGTCATCCAAATAGAAGACTTACAGATTTTATT CTTCATGACGAAAATGGTAAACCACAGCCTCTTGAGGTGCTTGAAGTTAATGATTTGTATATCACTGGAGTTATATTGCCTCTTGAAGGAAGTACAGAGA AGAAAAAAGAGAAAGAGAGGGTTAAATGTGAAGGCTTTGGTCGCATTGAAGCATGGGATATATCAGGCTATGAAGAATGCTCTCCAGTGATATGGCTTTC TACCGACGTTGCTGATTATGACTGCTTGAAACCAGCCCCCAGTTACAAAAAGATTTATGACCATTTCTTTGAAAAGGCTAGAGCATGTATAGAAGTATAC AAAAAACTTGCAAAGTCTGCTGGTGGGGACCCTGATATAAGTCTCGATGAGTTGCTTGCTGGCATAGCACGATCTATGATTGGTAGTAAGTCCTTTTCTG GAACTACATCTGTGAAGGATTTTGTTATTTCTCAGGGCCAGTTTATTTATAAGCAGCTCATAGGTTTAGACATGACCGCCAAGACAAAGGACAAGATGTT TGTAGATATTCCTGCTCTTGCTGCCCTTAGAGATGAGAGTAGGAAACAAGCTAACTGTGTGCATGCAGAAGTAAAGCCTTCAAATGGGAGTCTAAGAATT GATTCGGGAGTTGGAGATGAAGAGAATAAGAGTCAAATGAGTTCCATGACTGAAGTTGCTGAAGAAGATGAGGATGCAAAGTTGGCAAGGCTATTGCAGG AAGAAGAGCAATGGCGATCTATGAAGCAGAAGAAAAACCCCAGATCAGTCTCTTCATCTAACAAATACTATATCAAAATTGATGAAGATGAAATTGCAAA TGATTACCCACTCCCTGTCTATTATAAAACAGCTCTTCAGGAAACAGATGAATTTATAGTTTTTGATAATGACTATGATGTGTATGACATTGAAGATCTT CCTCGAAGCATGCTGCATAATTGGTCTTTATACAACTCAGATGCTAGATTGATTTCCTTGGAACTTCTTCCTATGAAATCTTGTTCAGATATTGATGTTA CTATCTTTGGGTCAGGGGTAATGACTGCGGATGATGGAAGTGGGTTCCACCTGGATACCGATACTGACCAATCTTCTTCTATTAGCTCAGGAGCACAAGT TCCTGATGGAATTCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGTTCATCTTTGATTTTCATATCAATCCGCACTGACATGGCATGG TATAGACTTGGGAAACCATCAAAACAGTATGCTCCTTGGTATGACACAGTACTGAAAACTGCACGGCTAGCTGTTAATATTATCACCTTGCTGAAAGGGC AGACCCGAGTATCACGACTTTCCTTTGGAGATGCCATCAAGAAAGTATCGGAGTTTACTTCAAAAGATAAATCTTACATTTCTTCTGATCCATCGGCTGT TGAGAGGTATATTGTTGTCCATGGACAGATTATTCTGCAGTTGTTTGCAGAATATCCTGATGACACAATCAGAAAGTCTGCATTTGTCACTGGTCTTATG AGCAAAATGGAAGCACGACGCCATACTAAATGGTTAGTGAAGAAGAAGAAAGTTGTATCTAAGAGTGGACCAAATTTAAATCCTAGGGCAGCAGTGGCTT CTATTGTGTCCAAAAGGAAAGCCATGCAAGCTACAACAACAAAACTGGTCAACAGAATCTGGGGAGAATATTACTCTAACCACTCGCCAGAGAATGCCGA AGAGGGAGCTGCTGGTGAAGTAAAGGATGAGGATGAATTAGAAGAACAGGAAGAAAATGAAGAGGAGGATATTGAGGAGATGTTATGTTTGGAGCGAATC CAAAAGACACATTCTGTTTCCAAACAAATCAAAACATTTTCTGCCGATAGTGAAATAAGATGGGGTAGTGGTCTTGAGGGAAAGACCAGTTATGGATATC TTCTTTATAAAGAGGCAATTATTCATGAGGAAGTTATTTCTGTGGGAGGATCTGTGTTATTAGAAGTTGATGAAGCAGATGATCTTCCTGATATTTATTA CGTTGAATATATGTTCGAAGCAAAGGGTGGAAAGAAAATGTTTCACGGTAGGAGGATGCAGCATGGGTGTACCACTGTTCTTGGCAACACTGCCAATGAG AGAGAACTGTTTCTTACTAACGAGTGTAGAGATCTGAGACTTGAGGATGTGAAGCAGGCAGCTCTTGTAGAGTTGCGAAAAATGCCTTGGGGGCATCAGC ATAGAAGGGATAATATTGCTTCCGACAAAACTGACAGGGCTAGAGCAGAAGATAGGAAGAGGAAAGGACTACCTACTGAATACTATTGTAAAAGCCTTTA CTGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCATCCGATACTTTGGGTCTAGGGTCTGGCATTTGTCACTCTTGCAATTTAAAGGAGGCTGAAAGGGAG AAAGAAAACTTCAAAGTCAATTCATCTAAGTCTAGTTTCCTACTTAATGGATCTGAATATGCTCTTCATGATTATATTTATGTAAGTCCTTTTGACTTCG AGGAAAGAATAGAACAAGGAACTCACAAGAGTGGGAGGAATGTGGGGCTGAAGGCTTATGTTGTTTGTCAAGTGGTGGAGATTATTGTCAAGAAGGAAAT AAAACAAGCTGAAATGAAATCCACACAGGTCAAAGTCAGAAGGTTTTTCAGACCTGAAGATATAACAAATGAGAAGGCATATTGCTCTGATGTTCAAGAG GTATATTATAGTGATGAAACACACATAATATCTGTACAATCCATAGAAGGGAAATGTGAGGTCAGAAAGAAGAGTGATGTCCCTGCATGCAGCGCCTCTG GACTCTTCCAAAATGTATTTTTCTGTGAGCACTTGTATGATCCTGCCACTGGTTCACTTAAAAAGTTGCCAGCTCATATCAAGGTAAAATATTCAAGTGC ACAAAAAGGTGATGCTGCAGCTTTAAAGAGAAAAGGGAAGAGTAAAGAGGGAGAAAGCGTCCGAGAGCCCGAGAAGGAAATGAAGACATTGGATGAAAAA CGCTTAGCAACCTTAGACATTTTTGCGGGTTGTGGTGGTTTATCTGAGGGGTTGCAGCAGTCAGGAATTGCAAACACTAAATGGGCAATAGAATATGAAG AACCAGCTGGGGATGCATTTAGAGCTAACCATCCTGAAGCACTTGTGTTTGTTAACAACTGCAATGTTATTCTTAGGGCTGTGATGGAGAAATGTGGGGA CACAGATGATTGCATTTCAACTTCGGAGGCCTCAGAGTTGGCTGCAAAACTCGATGAGAAGGATATAAGTAATTTACCCATGCCTGGGCAAGTTGATTTC ATTAATGGAGGACCTCCTTGCCAGGGTTTCTCTGGGATGAATAGGTTCAACCAAAGCAGTTGGAGTAAAGTCCAGTGTGAGATGATATTAGCATTCTTAT CCTTTGCTGATTACTTTCGGCCAAGGTATTTCTTGCTAGAGAATGTGCGGAACTTTGTATCCTTTAATAAAGGACAGACATTCAGGCTAACCTTGGCTTC ACTCTTGGAGATGGGCTATCAGGTGAGGTTTGGCATCCTGGAAGCTGGAGCTTTTGGAGTTTCACAGTCTAGAAAAAGGGCATTCATATGGGCAGCTTCT CCAGAGGATGTGCTTCCTGAGTGGCCTGAGCCTATGCACGTGTTTTCTGCCCCTCAGTTGAAAATCTCCTTATCTGAAGGTGTCCAGTATGCTGCTGTCC GCAGTACAGCAAATGGTGCCCCGCTACGTGCTATAACTGTTCGTGATACCATTGGTGATCTCCCGCCTGTGGGGAATGGTGCCTCGAAATCAAACATGGA GTATGGACATGAGCCTGCCTCATGGTTCCAGAGGAATATTCGAGGGGATATGGCTGTTCTGACTGATCATATCTCGAAGGAGATGAACGAGCTAAACTTG ATCAGATGCCAGAGGATCCCAAAGCGGCCAGGTTCTGATTGGCGTGATCTCCCAGAGGAAAAGATCACATTGTCTACTGGACAAGTTGTTGATTTGATAC CATGGTGCTTGCCAAACACGGCCAAGCGGCATAATCAGTGGAAGGGACTCTTCGGTAGATTGGATTGGGAAGGGAACTTCCCAACTTCCATTACAGACCC TCAACCAATGGGGAAGGTTGGAATGTGCTTCCATCCTGACCAAGATAGAATTCTTACTGTTCGTGAGTGTGCCAGATCTCAAGGTTTCCCTGATAGCTAT CAATTTTCCGGTAACATCATACACAAGCACAGGCAGATTGGGAATGCTGTTCCTCCTCCTCTGGCGTTTGCGTTGGGAAGAAAGCTGAAGGAAGCAGTGG AAAGTAAGAGCTCCAATTAGATGGATTGCTTATCATATTTATTATAGGATTGAATTGGTTTTCAAGAGATATTGTAAATTGTTTGAGGGGTTCCCCATAC AATGAGTCATTGTAGATAGTTGTATCCATTGGTCATTTGTTGAGTTTTATTGAATGGATAAATGTCAAACTCTTTTGGTTGGTTATAATTGAGACCAAAT GAAGTAAACATATACAATTATATTATATATCAATCTGGCACTTTCTTTATAA
• Tissue: flowers
• Gene name: LI_gene_81539;
• Additional information: details;

Expression of Ll_transcript_39465

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.4
• LF2: 0.2
• LF3: 0.3
• LF4: 0.2
• UF1: 0.1
• UF2: 0
• UF3: 0.2
• UF4: 0.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_39465

• Blastp: DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 61.05% of identity
• Blastx: DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 61.29% of identity
• Eggnog: Cytosine-specific methyltransferase(COG0270)
• Kegg: Link to kegg annotations (AT5G49160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449457.1)
• Pfam: Cytosine specific DNA methyltransferase replication foci domain (PF12047.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;