| Id Trinity | FTRINITY_DN58957_c0_g6_i2 |
|---|---|
| Name Transcript | Ll_transcript_39467 |
| Sequence | TCCATCGCTTCAGAATCAGGTGTATATAAATAAACCCTTTTTTCACCCTACTTTTCTACTTGTCTTTCAGTTCCTCTACTTTTCTTCACCAGGTGTTAAA AACAGCGAAGACAAGAAGAAAACTGTAGATTGTAAATCTGAAGAGGAAGCTATGGCCCGAGGTAAACAAAAGAAGCGAAGCTTGCCAGAACAAAGTGAGC AGCCAACTGGTACTCGCAAAATGCCAAAACGAGCTGCAGCAAGTAAAAATCTGAAGGAGAAATCTTTTTCCATACCTGAGAAATCTTGTCGTATTGAGAC AAAGAATGATCGAGTTGTAGATGAAGAACTCCTTGCTATCCGCCTGACTTCTGAAAAGGATGATGGTCGTCCAAATAGAAGACTTACAGACTTTATTCTT CATGATGAGAATGGTACGCCGCAGCCTCTTGAGGTGCTTGAAGTTAATGACTTGTATATCACTGGAGTTATATTGCCTCTTGAAGGAAGTGCAGATAAGA AAAAAGAGAAAGAGAAAGGGATTAGGTGTGGAGGCTTTGGTCGCATTGAAACATGGGATATATCAGGCTATGAAGAGGGCTCTCCAGTGATATGGCTTTC TACAGATGTTGCTGATTATGACTGCTTGAAACCAGCCCCTGGTTACAAAAAAATTTATGATCATTTCTTTGAAAAGGCTCGAGCATGTATAGAAGTATAC AAAAAACTTGCAAAGTCTGCTGGTGGGGACCCTGATCTAAGTATTGACGAGTTACTTGCTGGCATAGCACGATCTATGATTGGTAGTAAGTCCTTTTCTG GAACTACATCTGTGAAGGATTTTGTTATTTCTCAGGGTCAGTTTATCTATAAGCAGCTCGTAGGTTTAGACATGACTTCCAAGACAAATGACAAGATGTT TGCAGATATTCCTGCTCTTGTTGCTCTTAAAGATGAGAGTAGGAAACAAGCAAACTATGTCCATGCAAAAGTAAAACCTTCAAATGGCACTCTAAGGATT GATTCAGGAGTCAGAGATGAAGAGAACAAGAATCAAATGAATTCCATTACTGAAGAAGTTGCTGAGGAAGATGAGGATGCAAAGTTGGCAAGGCTATTGC AGGAAGACGAGCATTGGCGATCTATAAAGCAGAAGAAAAACCCCAGAACAACGTCTTCATCTAAAAAATACTATATCAAAATTGATGAAGACGAGATTGC AAATGATTACCCGCTCCCCGTCTATTACAAAACTTCTCTTCAGGAAACAGATGAATTTATAGTTTTTGATAATGACTATGATGTCTATGACATTGAAGAT CTTCCTCGGAGCATGCTGCATAATTGGTCTTTATACAACTCTGATGCTAGATTGATTTCATTGGAACTTCTTCCTATGAAATCTTGTTCAGATATTGATG TTACCATCTTTGGGTCAGGAGTAATGACTGCAGATGATGGAAGTGGGTTCCATCTAGATACTGATGCTGACCAATCTTCTTCCAATAGCTCAGGAGCACT TGTTGCTGATGGAATTCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGTTCATCTTTGATTTTCATATCAATCCGCACTGACATGGCA TGGTATAGACTTGGGAAACCATCAAAACAGTATGCTCCATGGTATGACACAGTGTTGAAAACTGCAAGGCTAGCTATTGACATTATCACCTTGTTGAAAG AGCAGAGCCGAGTATCTCGACTTTCTTTTGGAGATGTCATCAAGAAAGTATCTGAGTTTACCCCGAAAGATAAATCTTACATTTCTTCTGATCCATTGTC TGTTGAGAGGTATATTGTTGTCCATGGACAAATTGTTCTGCAGCTTTTTGCAGAATATCCTGATGACACAATCAGAAAATCTCCATTTGTCACTGGTCTT ATGAGCCAAATGGAAGCACGACACCATACTAAATGGTTAGTGAAGAAGAAGAAAGTTGTACCTAAGAGTGAACCAAATTTAAATCCTAGGGCAGCAGTGG CTTCTATAGTGTCCAAAAGGAAAGCCATGCAAGCTACAACAACGAAGCTGATCAATAGAATCTGGGGAGAGTATTATTCTAACCACATGCCAGAGGATTC CAAAGAGGGAGCTGGTAGTGAAGTAAAGGATGAGGATGAAGTTGAAGAACAGGAGGAAAATGAAGATGAGGATATTGAAGAGACATTATGTTTGGAAGAA ACCCAAAAGCCACATTCTGCTTCCAAACAAATCAAAACATTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81539; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39467
| Blastp | DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 56.99% of identity |
|---|---|
| Blastx | DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 56.53% of identity |
| Eggnog | Cytosine-specific methyltransferase(COG0270) |
| Kegg | Link to kegg annotations (AT5G49160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413465.1) |
| Pfam | Cytosine specific DNA methyltransferase replication foci domain (PF12047.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |