Ll_transcript_39474

• Id Trinity: FTRINITY_DN58957_c0_g6_i4
• Name Transcript: Ll_transcript_39474
• Sequence: GCCATGTTTCCTTGTTCTTTTGTCCTTCTATTTTACAGGCCTAATGCGTGATTAATGCTTATAAAGCTCCCTCACTTCTGTCTCATACCTAACCCAGTCA CCTCTTTATGTTGCCTTTATACCATTTATCTCTATTCCTGATCAAATTCATATATTTACAATTTTTCTGATTAATCTTGTTAACCTTCCAAAAATAGGTG TTAAGAGCAGCCAAGAGAAGAAGAAAACTGTTGATTGTGAAACTAAAGAGGAAGTTATGGCCCGAGGTAAACAAAAGAAGCGAAGCTTACCAGAAAAGAG TGAGCAGCCAACTGGTACTCGCAAAATGCCAAAACGAGCTGTGGCAAGTAAAAATATGAAGGAGAAATCATTTTCCATACCTGGGAAATCTTGTCTTATT GAGACAAAGAAGGATCAAATTGTAGATGAAGAACTTCTTGCTATCCGCCTGACTTCTGGACAGGATGATGGTCATCCAAATAGAAGACTTACAGATTTTA TTCTTCATGACGAAAATGGTAAACCACAGCCTCTTGAGGTGCTTGAAGTTAATGATTTGTATATCACTGGAGTTATATTGCCTCTTGAAGGAAGTACAGA GAAGAAAAAAGAGAAAGAGAGGGTTAAATGTGAAGGCTTTGGTCGCATTGAAGCATGGGATATATCAGGCTATGAAGAATGCTCTCCAGTGATATGGCTT TCTACCGACGTTGCTGATTATGACTGCTTGAAACCAGCCCCCAGTTACAAAAAGATTTATGACCATTTCTTTGAAAAGGCTAGAGCATGTATAGAAGTAT ACAAAAAACTTGCAAAGTCTGCTGGTGGGGACCCTGATATAAGTCTCGATGAGTTGCTTGCTGGCATAGCACGATCTATGATTGGTAGTAAGTCCTTTTC TGGAACTACATCTGTGAAGGATTTTGTTATTTCTCAGGGCCAGTTTATTTATAAGCAGCTCATAGGTTTAGACATGACCGCCAAGACAAAGGACAAGATG TTTGTAGATATTCCTGCTCTTGCTGCCCTTAGAGATGAGAGTAGGAAACAAGCTAACTGTGTGCATGCAGAAGTAAAGCCTTCAAATGGGAGTCTAAGAA TTGATTCGGGAGTTGGAGATGAAGAGAATAAGAGTCAAATGAGTTCCATGACTGAAGTTGCTGAAGAAGATGAGGATGCAAAGTTGGCAAGGCTATTGCA GGAAGAAGAGCAATGGCGATCTATGAAGCAGAAGAAAAACCCCAGATCAGTCTCTTCATCTAACAAATACTATATCAAAATTGATGAAGATGAAATTGCA AATGATTACCCACTCCCTGTCTATTATAAAACAGCTCTTCAGGAAACAGATGAATTTATAGTTTTTGATAATGACTATGATGTGTATGACATTGAAGATC TTCCTCGAAGCATGCTGCATAATTGGTCTTTATACAACTCAGATGCTAGATTGATTTCCTTGGAACTTCTTCCTATGAAATCTTGTTCAGATATTGATGT TACTATCTTTGGGTCAGGGGTAATGACTGCGGATGATGGAAGTGGGTTCCACCTGGATACCGATACTGACCAATCTTCTTCTATTAGCTCAGGAGCACAA GTTCCTGATGGAATTCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGTTCATCTTTGATTTTCATATCAATCCGCACTGACATGGCAT GGTATAGACTTGGGAAACCATCAAAACAGTATGCTCCATGGTATGACACAGTGTTGAAAACTGCAAGGCTAGCTATTGACATTATCACCTTGTTGAAAGA GCAGAGCCGAGTATCTCGACTTTCTTTTGGAGATGTCATCAAGAAAGTATCTGAGTTTACCCCGAAAGATAAATCTTACATTTCTTCTGATCCATTGTCT GTTGAGAGGTATATTGTTGTCCATGGACAAATTGTTCTGCAGCTTTTTGCAGAATATCCTGATGACACAATCAGAAAATCTCCATTTGTCACTGGTCTTA TGAGCCAAATGGAAGCACGACACCATACTAAATGGTTAGTGAAGAAGAAGAAAGTTGTACCTAAGAGTGAACCAAATTTAAATCCTAGGGCAGCAGTGGC TTCTATAGTGTCCAAAAGGAAAGCCATGCAAGCTACAACAACGAAGCTGATCAATAGAATCTGGGGAGAGTATTATTCTAACCACATGCCAGAGGATTCC AAAGAGGGAGCTGGTAGTGAAGTAAAGGATGAGGATGAAGTTGAAGAACAGGAGGAAAATGAAGATGAGGATATTGAAGAGACATTATGTTTGGAAGAAA CCCAAAAGCCACATTCTGCTTCCAAACAAATCAAAACATTTTCTGCAGACAGAGAAATAAGATGGCATGGGGATCCTGAGGGGAAGACCAGTTCTGGTTA TCTTCTTTATAAAGAGGCAATTATTCATGGGGATGTTATATCTGTGGGAGGATCTGTGTTAGTAGAAGTTGATGAATCTGATGAACCTGATATTTATTAT GTGGAATATATGTTTGAAGCGAAGGGTGGAAAGAAAATGTTTCATGGTAGGATGATGCAGCATGGATGTAACACTGTTCTTGGCAACACCGCCAATGAGA GAGAAGTCTTTCTGGCCAATGAGTGCAGGGATCTGAGACTTGAGGATGTGAAACAGGCAGCTATTGTAGACTTACGCAAAATGCTTTGGGGACATCAGCA CAGAAAGGATAATACTGCTTCTGATAAAACTGATAGGGCCAGAGCAGAAGATCGGAAGAAGAAAGGACTACCTACTGAATACTATTGTAAAAGCCTTTAC TGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCATATGATACTTTGGGTCTAGGATCCGGCATTTGTCACTCTTGCAATTTAAAGGAAGCTGAAAGGGAGA AAGAAATGTTCAAAGTCAATTCATCTAAGTCTAGTTTCATATTAAATGGAACTGAATATGGTCTTCTTGATTATGTTTATGTTAGTCCATTTGACTTTGA TGAAAGAATAGAACAAGGGACTCACAAGAGTGGGAGGAATGTGGGGTTGAAAGCTTATGTTGTTTGTCAAGTGATGGAGATTATTGTCAACAAGGAAATA AAACAAGCTGAAATAAAATCCACACAGGTCAAAGTCAGAAAGTTTTTCAGACCTGAAGATATATCAAATGAGAAGGCATATTGCTCCGATGTTCAAGAGG TATATTATAGCAATGAAACACATATAATCTCCGCACAATCCATAGAAGGGAAATGTGAGGTCAGAAAGAAGAATGATGTCCCTGCATGCAGTGCCTCTGG ACTCTTCCAAAATGTATTTTTCTGTGAGCACCTGTATGATCCAGCCACTGGGTCACTTAAAAAGTTGCCAGCTAATATCAAGGTAAAATATTCAAGT
• Tissue: flowers
• Gene name: LI_gene_81539;
• Additional information: details;

Expression of Ll_transcript_39474

FPKM

• FPAB: 0.4
• FPNAB: 0.4
• LF1: 0.6
• LF2: 0.3
• LF3: 0.3
• LF4: 0.1
• UF1: 0.5
• UF2: 0.3
• UF3: 0.5
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_39474

• Blastp: DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 54.5% of identity
• Blastx: DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 54.55% of identity
• Eggnog: Cytosine-specific methyltransferase(COG0270)
• Kegg: Link to kegg annotations (AT5G49160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449457.1)
• Pfam: Cytosine specific DNA methyltransferase replication foci domain (PF12047.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;