| Id Trinity | FTRINITY_DN58957_c0_g6_i5 |
|---|---|
| Name Transcript | Ll_transcript_39477 |
| Sequence | AGTAGTCCCCCAAATAGAGTTTGGTTGCGTCCAAATTCCAACTTCTTCAGCCACTTGAAACCAAAATTTTCACTCACACCCTTTAGTCGAAGGGCGCCAA AACTCTGACAAAATTTATATCTTCCGCCAATGCTGAAAAAAATCCCCCACAACACTTGAAAATTCCCCACACCCTTTTGGACATACATTACTTCTTTTCA TCTCCCAATAGAAACTTTCTTTTGCGAAAAAGGAAGGAAATTGAAAGCACAATATGGGTTCAGCTTCTCTCGTCGATTCATCTCAACCCTCCATCGCTTC AGAATCAGGTGTTAAAAACAGCGAAGACAAGAAGAAAACTGTAGATTGTAAATCTGAAGAGGAAGCTATGGCCCGAGGTAAACAAAAGAAGCGAAGCTTG CCAGAACAAAGTGAGCAGCCAACTGGTACTCGCAAAATGCCAAAACGAGCTGCAGCAAGTAAAAATCTGAAGGAGAAATCTTTTTCCATACCTGAGAAAT CTTGTCGTATTGAGACAAAGAATGATCGAGTTGTAGATGAAGAACTCCTTGCTATCCGCCTGACTTCTGAAAAGGATGATGGTCGTCCAAATAGAAGACT TACAGACTTTATTCTTCATGATGAGAATGGTACGCCGCAGCCTCTTGAGGTGCTTGAAGTTAATGACTTGTATATCACTGGAGTTATATTGCCTCTTGAA GGAAGTGCAGATAAGAAAAAAGAGAAAGAGAAAGGGATTAGGTGTGGAGGCTTTGGTCGCATTGAAACATGGGATATATCAGGCTATGAAGAGGGCTCTC CAGTGATATGGCTTTCTACAGATGTTGCTGATTATGACTGCTTGAAACCAGCCCCTGGTTACAAAAAAATTTATGATCATTTCTTTGAAAAGGCTCGAGC ATGTATAGAAGTATACAAAAAACTTGCAAAGTCTGCTGGTGGGGACCCTGATCTAAGTATTGACGAGTTACTTGCTGGCATAGCACGATCTATGATTGGT AGTAAGTCCTTTTCTGGAACTACATCTGTGAAGGATTTTGTTATTTCTCAGGGTCAGTTTATCTATAAGCAGCTCGTAGGTTTAGACATGACTTCCAAGA CAAATGACAAGATGTTTGCAGATATTCCTGCTCTTGTTGCTCTTAAAGATGAGAGTAGGAAACAAGCAAACTATGTCCATGCAAAAGTAAAACCTTCAAA TGGCACTCTAAGGATTGATTCAGGAGTCAGAGATGAAGAGAACAAGAATCAAATGAATTCCATTACTGAAGAAGTTGCTGAGGAAGATGAGGATGCAAAG TTGGCAAGGCTATTGCAGGAAGACGAGCATTGGCGATCTATAAAGCAGAAGAAAAACCCCAGAACAACGTCTTCATCTAAAAAATACTATATCAAAATTG ATGAAGACGAGATTGCAAATGATTACCCGCTCCCCGTCTATTACAAAACTTCTCTTCAGGAAACAGATGAATTTATAGTTTTTGATAATGACTATGATGT CTATGACATTGAAGATCTTCCTCGGAGCATGCTGCATAATTGGTCTTTATACAACTCTGATGCTAGATTGATTTCATTGGAACTTCTTCCTATGAAATCT TGTTCAGATATTGATGTTACCATCTTTGGGTCAGGAGTAATGACTGCAGATGATGGAAGTGGGTTCCATCTAGATACTGATGCTGACCAATCTTCTTCCA ATAGCTCAGGAGCACTTGTTGCTGATGGAATTCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGTTCATCTTTGATTTTCATATCAAT CCGCACTGACATGGCATGGTATAGACTTGGGAAACCATCAAAACAGTATGCTCCATGGTATGACACAGTGTTGAAAACTGCAAGGCTAGCTATTGACATT ATCACCTTGTTGAAAGAGCAGAGCCGAGTATCTCGACTTTCTTTTGGAGATGTCATCAAGAAAGTATCTGAGTTTACCCCGAAAGATAAATCTTACATTT CTTCTGATCCATTGTCTGTTGAGAGGTATATTGTTGTCCATGGACAAATTGTTCTGCAGCTTTTTGCAGAATATCCTGATGACACAATCAGAAAATCTCC ATTTGTCACTGGTCTTATGAGCCAAATGGAAGCACGACACCATACTAAATGGTTAGTGAAGAAGAAGAAAGTTGTACCTAAGAGTGAACCAAATTTAAAT CCTAGGGCAGCAGTGGCTTCTATAGTGTCCAAAAGGAAAGCCATGCAAGCTACAACAACGAAGCTGATCAATAGAATCTGGGGAGAGTATTATTCTAACC ACATGCCAGAGGATTCCAAAGAGGGAGCTGGTAGTGAAGTAAAGGATGAGGATGAAGTTGAAGAACAGGAGGAAAATGAAGATGAGGATATTGAAGAGAC ATTATGTTTGGAAGAAACCCAAAAGCCACATTCTGCTTCCAAACAAATCAAAACATTTTCTGCAGACAGAGAAATAAGATGGCATGGGGATCCTGAGGGG AAGACCAGTTCTGGTTATCTTCTTTATAAAGAGGCAATTATTCATGGGGATGTTATATCTGTGGGAGGATCTGTGTTAGTAGAAGTTGATGAATCTGATG AACCTGATATTTATTATGTGGAATATATGTTTGAAGCGAAGGGTGGAAAGAAAATGTTTCATGGTAGGATGATGCAGCATGGATGTAACACTGTTCTTGG CAACACCGCCAATGAGAGAGAAGTCTTTCTGGCCAATGAGTGCAGGGATCTGAGACTTGAGGATGTGAAACAGGCAGCTATTGTAGACTTACGCAAAATG CTTTGGGGACATCAGCACAGAAAGGATAATACTGCTTCTGATAAAACTGATAGGGCCAGAGCAGAAGATCGGAAGAAGAAAGGACTACCTACTGAATACT ATTGTAAAAGCCTTTACTGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCATATGATACTTTGGGTCTAGGATCCGGCATTTGTCACTCTTGCAATTTAAA GGAAGCTGAAAGGGAGAAAGAAATGTTCAAAGTCAATTCATCTAAGTCTAGTTTCATATTAAATGGAACTGAATATGGTCTTCTTGATTATGTTTATGTT AGTCCATTTGACTTTGATGAAAGAATAGAACAAGGGACTCACAAGAGTGGGAGGAATGTGGGGTTGAAAGCTTATGTTGTTTGTCAAGTGATGGAGATTA TTGTCAACAAGGAAATAAAACAAGCTGAAATAAAATCCACACAGGTCAAAGTCAGAAAGTTTTTCAGACCTGAAGATATATCAAATGAGAAGGCATATTG CTCCGATGTTCAAGAGGTATATTATAGCAATGAAACACATATAATCTCCGCACAATCCATAGAAGGGAAATGTGAGGTCAGAAAGAAGAATGATGTCCCT GCATGCAGTGCCTCTGGACTCTTCCAAAATGTATTTTTCTGTGAGCACTTGTATGATCCTGCCACTGGTTCACTTAAAAAGTTGCCAGCTCATATCAAGG TAAAATATTCAAGTGCACAAAAAGGTGATGCTGCAGCTTTAAAGAGAAAAGGGAAGAGTAAAGAGGGAGAAAGCGTCCGAGAGCCCGAGAAGGAAATGAA GACATTGGATGAAAAACGCTTAGCAACCTTAGACATTTTTGCGGGTTGTGGTGGTTTATCTGAGGGGTTGCAGCAGTCAGGAATTGCAAACACTAAATGG GCAATAGAATATGAAGAACCAGCTGGGGATGCATTTAGAGCTAACCATCCTGAAGCACTTGTGTTTGTTAACAACTGCAATGTTATTCTTAGGGCTGTGA TGGAGAAATGTGGGGACACAGATGATTGCATTTCAACTTCGGAGGCCTCAGAGTTGGCTGCAAAACTCGATGAGAAGGATATAAGTAATTTACCCATGCC TGGGCAAGTTGATTTCATTAATGGAGGACCTCCTTGCCAGGGTTTCTCTGGGATGAATAGGTTCAACCAAAGCAGTTGGAGTAAAGTCCAGTGTGAGATG ATATTAGCATTCTTATCCTTTGCTGATTACTTTCGGCCAAGGTATTTCTTGCTAGAGAATGTGCGGAACTTTGTATCCTTTAATAAAGGACAGACATTCA GGCTAACCTTGGCTTCACTCTTGGAGATGGGCTATCAGGTGAGGTTTGGCATCCTGGAAGCTGGAGCTTTTGGAGTTTCACAGTCTAGAAAAAGGGCATT CATATGGGCAGCTTCTCCAGAGGATGTGCTTCCTGAGTGGCCTGAGCCTATGCACGTGTTTTCTGCCCCTCAGTTGAAAATCTCCTTATCTGAAGGTGTC CAGTATGCTGCTGTCCGCAGTACAGCAAATGGTGCCCCGCTACGTGCTATAACTGTTCGTGATACCATTGGTGATCTCCCGCCTGTGGGGAATGGTGCCT CGAAATCAAACATGGAGTATGGACATGAGCCTGCCTCATGGTTCCAGAGGAATATTCGAGGGGATATGGCTGTTCTGACTGATCATATCTCGAAGGAGAT GAACGAGCTAAACTTGATCAGATGCCAGAGGATCCCAAAGCGGCCAGGTTCTGATTGGCGTGATCTCCCAGAGGAAAAGATCACATTGTCTACTGGACAA GTTGTTGATTTGATACCATGGTGCTTGCCAAACACGGCCAAGCGGCATAATCAGTGGAAGGGACTCTTCGGTAGATTGGATTGGGAAGGGAACTTCCCAA CTTCCATTACAGACCCTCAACCAATGGGGAAGGTTGGAATGTGCTTCCATCCTGACCAAGATAGAATTCTTACTGTTCGTGAGTGTGCCAGATCTCAAGG TTTCCCTGATAGCTATCAATTTTCCGGTAACATCATACACAAGCACAGGCAGATTGGGAATGCTGTTCCTCCTCCTCTGGCGTTTGCGTTGGGAAGAAAG CTGAAGGAAGCAGTGGAAAGTAAGAGCTCCAATTAGATGGATTGCTTATCATATTTATTATAGGATTGAATTGGTTTTCAAGAGATATTGTAAATTGTTT GAGGGGTTCCCCATACAATGAGTCATTGTAGATAGTTGTATCCATTGGTCATTTGTTGAGTTTTATTGAATGGATAAATGTCAAACTCTTTTGGTTGGTT ATAATTGAGACCAAATGAAGTAAACATATACAATTATATTATATATCAATCTGGCACTTTCTTTATAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81539; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39477
| Blastp | DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 60.48% of identity |
|---|---|
| Blastx | DNA (cytosine-5)-methyltransferase 1 from Arabidopsis with 60.53% of identity |
| Eggnog | Cytosine-specific methyltransferase(COG0270) |
| Kegg | Link to kegg annotations (AT5G49160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413465.1) |
| Pfam | Cytosine specific DNA methyltransferase replication foci domain (PF12047.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |