Ll_transcript_36873

• Id Trinity: FTRINITY_DN58963_c0_g1_i1
• Name Transcript: Ll_transcript_36873
• Sequence: ATTATGATGACCTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTACTGTCTTTCAATCTGAACAAGA AATGAAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCACAGCGTAATGCTGCTCTTCAAATACCAACTAGCTTTCGTTACAGACATGGT AATGAACAGGAACGACGCCATGGAAGAGGACGTAATTTTCACCGTGATTTTTCCGAAAGTCAACTCTCTATGGCCATTGAAGCCAGTTTGGAGGCAGCAA ATGCAGAGCACATGTTTCATGATCCACCGACATCAGATACTGGACAAGTTTATGTTCAAAATGGGAATGCTAATATTGATTCTGCTCAGCCACCGGAATC ATCAGGATCATCAAGATATCTACAAGTGTTGGGGCAGAACTCTTCGGGCGCACCTTTGGAAAGTTCTTCCTTTCCTCCACTCCCCAAAGCTTCCAGAAAA GGCAAGCAGAAGTCCAAACATGGGTCAGAAGGTTCATCTAGTAACTCCATGGCTGCGCATCTGCGCCGACATAGGAATGTGTCTGTTATTAATTCTGCTA ATGCTTGGCCAGCAGCAAGTCGTGGACCTGCACAACCTTTAAGTAATCCTACACTATCTAGAGTGTCAACAAACACTGCTCCTGGAGTGTCACGTAATTC TGGCAAGGCCGTCATTAACAGTGCACCTGCACCATCAACTTATGCTAGTTCTGTTCAGCCTATGCAGAGAACTGCTCAAGAGACACGTGGTAATGGTGGA ATTGTCCACTCAGCTTCTGCTCCAAATATCATTCAGAGCAGTCCTGTGGGACCTTCAATTTCTGATTTTCCTCCAGTATCTGCTGCAAAAGTGACAACTT TAGCGGCAAGCAGCCGATCTTTGTTGAATGCAAAGGATGTTCGCCAGAGCAGTCTCGTGGCACCTTCAATTTCTGATTTTCCTCCTGTATCTGCTGCACA GGTGAAGAAGTTAGCCACAAGCAGTCGAACTTCCTTGAATGCAGAGGATGTTCACACTGCTAACAAGTTGTTGATTGAAAAGATTCGCAGTACTCTTGAT TTTGATGAAGATAGATACACATTATTTAAAGATTTTTCTGCACAATATCGCCAAGGAATAATAGACGCACCTACATATCTGGACTATGTGCAGCAGTTTG GCTTGTCTCATCTTGTACATGAGCTGGCCCGGCTCTGCCCAGATGTTCAGAAGCAGAAGGAGCTTGTTGACTGTTACAATGCTAGTTTGCAAAAAAATGT TCTACTAGAAAATGGTTCAAGTCATACTAGCACCCATCGTCAAAATGGTAATATCTCCCAGAAAAGTAAAGGTAAGTCTGTTGATGCTGGTGTTAGTAAT CCCAATGAGAGATTAGCAGAAAGTTTTTTGAACACTGTACGTCAACTGCAACTTAACAATAACCTTTCGGAAGCGAATGTGGAAGTGCTATCGAGGGGTG ATTACCGTACTGACAAAGGTAAGTCAAAAATGGAGAGTTCTGGGGGTCAATCCATGGTGAAACTTGGTGGGCAGAGTGAGACATTAAGTGGCAGTATATC GAATCAAAATAGTGAGGATAAGGGTGGTAAAAACAGGCAACGTAAGAAAACTTCTAGGTTCCTTAGATCTCGCCTTGGTGATGCTTCTGCTGAATCAACT TTAGATACTGAAAGTTCACAGACTGATTCAGATCCGAAAACCACAAATGGCTTAAACAGTTACAAGAATAGCCCTGGAAGTATGCCTGCACGAGGTGCTT GGAGAAATAGTGGAGGCAAAAAACTCTTTTCCTAACTTTGCTTCTGAGGTTTTGAAAATATGAAGGACCAAATGTAGTTGAACTTATTTGGCTGGTGAGA GAAAAGACAAGGAAACTATAATTGAATTGAATGAGCAGCAAGAACCCAATTCTTCTTTGGAATAGTGGATTCAAATTTTTTGTTCGATTTTAGATGGATT GAAGGCTGAATATTATTTGCCTGATTAGAATTTTCATCTGTTGTGTTGATGTTCTGAGTAAAGGGAACGAGGGATGAATTGTTTTACTTGTGATGTTTTG ATTTGAAGAAACAAGAATGAGTTCTGACAATTACTATTTTGGCTATGTTGAAAATTGAAAAAGTGGAAGGTAAATAAGCCACG
• Tissue: flowers
• Gene name: LI_gene_81612;
• Additional information: details;

Expression of Ll_transcript_36873

FPKM

• FPAB: 7.2
• FPNAB: 8.4
• LF1: 6.1
• LF2: 7.6
• LF3: 7.1
• LF4: 6.8
• UF1: 6.3
• UF2: 7.5
• UF3: 6.5
• UF4: 6.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_36873

• Blastp: E3 ubiquitin-protein ligase ZNF598 from Homo with 34.44% of identity
• Blastx: E3 ubiquitin-protein ligase hel2 from Schizosaccharomyces with 36.51% of identity
• Eggnog: zinc finger protein(COG5236)
• Kegg: Link to kegg annotations (90850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441267.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;