Id Trinity | FTRINITY_DN58963_c0_g1_i2 |
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Name Transcript | Ll_transcript_36894 |
Sequence | GAATAAATGTTTTTGGTGCAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTACTGTCTTTCAATCTGAAC AAGAAATGAAGGTAGTTCCTTATAAGACATGGCTCTTTCTCACATTCTTCATATATATTTTCTTCCTTTACAACTTTGTATTCGGGAGGGTATGTCTATG TGCTACCTATCCATCAGTTTCATGAATCTAGAAGCTTGTGCATTTTAATGCCATGGTGTTTTTATGTTATATTACCACTTTTGGTGTATGTGTGGTTGTT ATTTCTTCATTGTTGAAAAATTGAACCCCGTGCCCTTCTTCTCTATGGTTTAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCACAGCG TAATGCTGCTCTTCAAATACCAACTAGCTTTCGTTACAGACATGGTAATGAACAGGAACGACGCCATGGAAGAGGACGTAATTTTCACCGTGATTTTTCC GAAAGTCAACTCTCTATGGCCATTGAAGCCAGTTTGGAGGCAGCAAATGCAGAGCACATGTTTCATGATCCACCGACATCAGATACTGGACAAGTTTATG TTCAAAATGGGAATGCTAATATTGATTCTGCTCAGCCACCGGAATCATCAGGATCATCAAGATATCTACAAGTGTTGGGGCAGAACTCTTCGGGCGCACC TTTGGAAAGTTCTTCCTTTCCTCCACTCCCCAAAGCTTCCAGAAAAGGCAAGCAGAAGTCCAAACATGGGTCAGAAGGTTCATCTAGTAACTCCATGGCT GCGCATCTGCGCCGACATAGGAATGTGTCTGTTATTAATTCTGCTAATGCTTGGCCAGCAGCAAGTCGTGGACCTGCACAACCTTTAAGTAATCCTACAC TATCTAGAGTGTCAACAAACACTGCTCCTGGAGTGTCACGTAATTCTGGCAAGGCCGTCATTAACAGTGCACCTGCACCATCAACTTATGCTAGTTCTGT TCAGCCTATGCAGAGAACTGCTCAAGAGACACGTGGTAATGGTGGAATTGTCCACTCAGCTTCTGCTCCAAATATCATTCAGAGCAGTCCTGTGGGACCT TCAATTTCTGATTTTCCTCCAGTATCTGCTGCAAAAGTGACAACTTTAGCGGCAAGCAGCCGATCTTTGTTGAATGCAAAGGATGTTCGCCAGAGCAGTC TCGTGGCACCTTCAATTTCTGATTTTCCTCCTGTATCTGCTGCACAGGTGAAGAAGTTAGCCACAAGCAGTCGAACTTCCTTGAATGCAGAGGATGTTCA CACTGCTAACAAGTTGTTGATTGAAAAGATTCGCAGTACTCTTGATTTTGATGAAGATAGATACACATTATTTAAAGATTTTTCTGCACAATATCGCCAA GGAATAATAGACGCACCTACATATCTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACATGAGCTGGCCCGGCTCTGCCCAGATGTTCAGAAGC AGAAGGAGCTTGTTGACTGTTACAATGCTAGTTTGCAAAAAAATGTTCTACTAGAAAATGGTTCAAGTCATACTAGCACCCATCGTCAAAATGGTAATAT CTCCCAGAAAAGTAAAGGTAAGTCTGTTGATGCTGGTGTTAGTAATCCCAATGAGAGATTAGCAGAAAGTTTTTTGAACACTGTACGTCAACTGCAACTT AACAATAACCTTTCGGAAGCGAATGTGGAAGTGCTATCGAGGGGTGATTACCGTACTGACAAAGGTAAGTCAAAAATGGAGAGTTCTGGGGGTCAATCCA TGGTGAAACTTGGTGGGCAGAGTGAGACATTAAGTGGCAGTATATCGAATCAAAATAGTGAGGATAAGGGTGGTAAAAACAGGCAACGTAAGAAAACTTC TAGGTTCCTTAGATCTCGCCTTGGTGATGCTTCTGCTGAATCAACTTTAGATACTGAAAGTTCACAGACTGATTCAGATCCGAAAACCACAAATGGCTTA AACAGTTACAAGAATAGCCCTGGAAGTATGCCTGCACGAGGTGCTTGGAGAAATAGTGGAGGCAAAAAACTCTTTTCCTAACTTTGCTTCTGAGGTTTTG AAAATATGAAGGACCAAATGTAGTTGAACTTATTTGGCTGGTGAGAGAAAAGACAAGGAAACTATAATTGAATTGAATGAGCAGCAAGAACCCAATTCTT CTTTGGAATAGTGGATTCAAATTTTTTGTTCGATTTTAGATGGATTGAAGGCTGAATATTATTTGCCTGATTAGAATTTTCATCTGTTGTGTTGATGTTC TGAGTAAAGGGAACGAGGGATGAATTGTTTTACTTGTGATGTTTTGATTTGAAGAAACAAGAATGAGTTCTGACAATTACTATTTTGGCTATGTTGAAAA TTGAAAAAGTGGAAGGTAAATAAGCCACG BLAST |
Tissue | flowers |
Gene name | LI_gene_81612; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_36894
Blastp | E3 ubiquitin-protein ligase ZNF598 from Homo with 34.44% of identity |
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Blastx | E3 ubiquitin-protein ligase ZNF598 from Homo with 34.44% of identity |
Eggnog | zinc finger protein(COG5236) |
Kegg | Link to kegg annotations (90850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441267.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |