| Id Trinity | FTRINITY_DN58966_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_39788 |
| Sequence | TGGAATAAAACACTTCTTCCTTCTTTCTTTGGGTAGTAAAATTGAATCACCTCAACCCCCGAATGTTAATTCTCTGAAAACCCTAACAACAATTTTCCTC ATCTTCATACCACTCATGGAAATTTCATTCTCTTCTTAAACCCTATTTCGAATCATCTCCACACCTCAAATTCAACGCTTCCTTTGGTTGCAATCACAAC AATAATGTCTCTCCCACCAGTACAGTATCTATACGTGACAGAGGACTCTCTTCGCGAATGGAAGAATGGAAACCCTAATCTCAAGCTTTCTGATCCTGTT CCATTGCTTCGATTCCTCTACGAGCTATGCTGGACTATGGTTCGGGGTGAATTGCCGTTACAGAAGTGTAAAGTGGCATTAGATTCTGTAAGATTCTCAG AGAAAGCTTCAACTGCGAAGTTAGCTTCAAATTTTGCAGATATAGTAACACAGATGGCACAAGATCATACAATGTCAGGAGATTTCCGTTCTCGTCTCAT CAAACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAGTTTTTGGGGGAGGCTGAATTGATCAAA ATAAAGGCTCAGGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACACGACTTCTGTATCAGCAAACCAAATTTAACCTTCTTAGAGAAGAGAGTGAGGGTT ATGCAAAGCTTGTCACTCTTCTTTGCGGGGACTCTGAAGTTCCAACTGAAAAGGCATCTACTGCAACAATTGGCATTATTAAGTCCTTAATTGGCCATTT TGATTTGGACCCAAATCGCGTTTTTGATATTGTTCTTGAGTGCTTTGAACTTCAACCTGAGAACCATGTGTTTTTGGAGCTCATTCCTATTTTTCCGAAG TCTCATGCTTCACAAATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCACCAGTTCTGTGCCATTTGGGCTCTATAAACTTACAGCCTTGC TGGTGAAGCAAAACTTTATTGATCTTGATAGCATATATGCACATCTACTTCCCAATGATGATGAAGCATTTGAGCATTATAACAGTTTCTCTTCCAAGCG CCTTGATGAGGCTAACAAAATTGGAAAAATAAACCTAGCAGCTACCGGAAAAGATCTCATGGATGATGAGAAACCGGGTGATGTCACTATTGATCTCTTT GCTGCTTTAGACATGGAAACTGATGCAATTGAAGAGCGAACACCTGAGCTTCAAAACAATCAAACTTTGGGCTTGCTTATTGGCTTCCTTTCTGTGGATG ATTGGTATCATGCACATATCCTATTTGACCGTCTTGCATCACTTAATACAGTGGAACATACACAAATATGTAGCAGTTTGTTTAGGCTTATCGAGAAGTC AATTTCTTCAGCATATGACATTATTTGTCAAACACATCGTCAAAACTCTGGATCGCCCACGGGTGGTGGCACTGATGCTATGGATGAAGATAACTCCTCA GGAGATGGATCTTTCATAGATCTTCCAAAGGAACTTTTTCAGATGCTTGCTTGTGCTGGACCTTATCTCTACCGTGATACTATGTTGTTGCAGAAGGTAT GCAGGGTGTTGCGAGGTTATTATCTTTCTGCTCTCGAACTTGTAAGCCGTAAGGATGGTGGTGCTTTAAATCCTCATCTACACCTTAAGGATGCAAAGCT AAGGGTGGATGCTGCTTTGGGAACATGTTTACTTCCTTCGCTGCAGTTGATTCCTGCCAATCCAGCTGTGGGCCATGAAATTTGGGAACTAATGAATCTC CTTCCTTATGAGGTGCGATATCGTTTATATGGTGAATGGGAAAGGGATGATGAGCGCTTTCCTATGCTCTTGGCTGCAAGACAAACTGCCAAGTTGGATA CTAGACGCATCTTGAAACGGCTAGCAAAGGAAAACTTGAAACAGTTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCTATGACAGTCCTTCGAAC AATTGTCCATCAGATTGAGGCGTACAGAGACATGATTACTCCTGTAGTGGACGCATTTAAGTATTTGACTCAGCTTGAGTATGATGTACTGGAATATGTT GTGATCGAGCGTTTGGCACTTGGTGGGCGTGATAAGTTAAAGGATGATGGACTTAATTTGTCAGACTGGCTTCAATCGCTAGCTTCATTTTGGGGCCACC TATGTAAGAAGTACCCATCAATGGAATTAAGGGGCCTTTTCCAATATCTTGTGAATCAGTTGAAAAAGGGGCAAGGAATTGAACTTGTTCTACTGCAGGA GCTCATTCAACAAATGGCAAATGTCCAGTACACTGAGAATTTGACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACT TCTTTTGGAGTAACTCGAAATAATAAGGCACTGATAAAGTCAACTAGCAGGCTTAGAGATTCATTACTTCCAAAAGATGAACCGAAGTTGGCAGTTCCCC TCTTATTGCTTATTGCCCAGTATCGTTCTCTGGTTCTCATCAATGCAGATGCACCTTACATTAAGATGCTTAGCGAGCAGTTCGATAGAAGCCATGGAAC TCTTCTTCAATATGTCGAATTTCTTTGCAATGCAGTTACGCCAGCAACAAACTATGGTGTCCTTATTCCCTCGCTCAATGACCTGGTCCACCTTTACCAT CTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGGCTTTTCAAGTCTCAGAGGACTCCTGATGTTTGCTGGCCCTTGGATGATAAAAATT CTGCAAGTGATGCATCTACAAACATTGAGTCTGATCCTGCAGATTATTCTAGCAGTATGGTTTTAGATCTTGGTTCAGCTCAAAATCCTTCAAGGTTATA ATCTGAACCTTTTGCCCCCTGGTTCCTCAAAACTTTCCCTCGAGGCTTTGACATAAACTGTGATTAGTGTTGAAGTCTCCTTGCTGTCGTGATGTGTTAG ATGCCATTCCTGCTGGTCAGATCTTCTTAATACTGTTAAAACCATGTTGCCTTCAAAAGCCTGGAATAGCCTATCTCCTGATCTTTATGCAACATTTTGG GGTCTCACATTATATGATCTGTATGTTCCAAGAAAGCGTTATGAGTCTGAAATAACCAAGCTGCATGCTAACCTCAAGTCTTTGGAGGAGCTTACTGATA ATTCTAACTCAGCAATCACCAAGAGGAAGAAAGAAAAGGAAAGAGTTCAAGAATCCCTTGATCATCTGATTAATGAACTTGATAAACATGAAGAGCATGT TGCATCTGTTCGTAAACGCCTTTCTCATGAAAAAGACAAATGGTTAAGTTCCTGTCCTGATACCTTGAAGATCAACATGGAGTTTCTTCAGCGTTGTATA TTTCCGCGCTGTACTTTCAGCATGCCGGATGCTGTTTATTGTGCTATGTTTGTACACACACTTCATTCCCTTGGAACCCCCTTTTTTAATACAGTCAACC ACATAGATGTTTTGATTTGTAAGACCCTACAACCAATGATATGCTGCTGCACTGAATACGAGGCTGGCAGGCTTGGCAGGTTTCTGTATGAAACTTTGAA GATTGCTTACTATTGGAAGAGTGATGAATCTATTTACGAACGTGAGTGTGGAAACATGCCAGGCTTTGCTGTTTATTACAGATATCCAAACAGCCAGCGA GTTACATATGGGCAGTTTATTAAGGTACACTGGAAGTGGATTCACAGAATAACACGGTTACTGATTCAGTGTTTGGAATCTAGTGAGTACATGGAAATCA GAAATGCTCTCATAATGTTGACAAAAATATCTGGCGTTTTCCCTGTTACTCGGAAGAGTGGGATCAACCTTGAAAAGCGGGTAGCTAAGATTAAAAGTGA TGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTGCTAGGAAGCCTTCTTGGGTTAACGATGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81652; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39788
| Blastp | THO complex subunit 2 from Arabidopsis with 74.02% of identity |
|---|---|
| Blastx | THO complex subunit 2 from Arabidopsis with 74.02% of identity |
| Eggnog | tHO complex(ENOG410XQ2A) |
| Kegg | Link to kegg annotations (AT1G24706) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437446.1) |
| Pfam | THO complex subunit 2 N-terminus (PF16134.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |