Id Trinity | FTRINITY_DN58966_c0_g2_i5 |
---|---|
Name Transcript | Ll_transcript_39791 |
Sequence | AAAAACATTTTCTTTTTCGGCGGTGGTGTAATTGAATCAAACCCAAACCACTCGATTCTCTGAAAACCCTAACAACAACTTTCCCCATCTTCGTATCACA ACCCATGGAAATTCTATTCCTTTCTTAAACCCTAAATTCGAATCATCATTCCCATTCCTTAAATTCAACGTTTCATTCTATTGGCTGCAATCACAACAGG AATGTCTCTCCCACCAGTACACTATCTATACGTCACAGATGATTCTCTTCGCGAATGGAAGAGTGGAAACCCTAATCTCAAGATCTCAGAACCTGTTCCA TTGCTTCGATTCCTCTACGAGCTTTGCTGGACTATGGTTCGGGGTGAATTGCCGTTACAGAAGTGTAAAGTAGCATTAGACTCTGTGAGATTCTCAGAGA AAGCTTCCACTGTGAAATTGGCTTCAAATTTTGCAGATATAGTAACCCAGATGGCTCAAGATCATACTATGTCAGGAGAGTTCCGCTCCCGTCTCATCAA ACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGCTGTGAGGAGGAGTTTTTGGGGGATGCTGAGTTGATCAAAATA AAGGCTCAGGATTTGAAGGGAAAAGAGGTCAGAGTTAATACACGGCTTCTATATCAGCAAACCAAATTTAACCTTCTCAGAGAAGAGAGTGAGGGCTATG CAAAGCTGGTCACTCTTCTTTGCCGGGATTCTGAAGTTCCAACTCAAAAGGCATCTGCAGCAACAATTGGCATTATTAAGTCGTTAATTGGCCACTTTGA TTTGGATCCAAATCGTGTTTTTGATATTGTTCTTGAGTGCTTTGAACTTCAGCCTGATAACGATTTGTTTTTGGACCTCATTCCTATTTTTCCGAAGTCT CATGCTTCACAGATTCTTGGATTTAAATTCCAATACTATCAGCGCATGGAAGTGAGCAATCCTGTTCCATTTGGGCTCTATAAACTCACAGCCTTGCTGG TGAAGCAAGATTTTATTGATCTTGATAGCATATATGCACATCTACTTCCTGGGGATGATGAAGCTTTTGAGCATTATAACAGTTTCTCTTCCAAACGTCT TGATGAGGCTAACAAAATTGGAAAAATAAACCTTGCTGCTACTGGAAAAGATCTTATGGATGATGAGAAACCGGGCGATGTCACAATAGATCTCTTTGCT GCTTTAGACATGGAAACTGATGCAATTGAAGAACGAACGGCTGAGCTTGAAAACAGTCAAACTTTGGGCTTGCTTACTGGCTTTCTTTCAGTAGATGACT GGAGTCATGCACATACACTATTTGACCGCCTTGCACCACTTAATACAGTGGAACATAACCAAATATGTGGCAGTTTGTTTAGGCTTATTGAGAAGTCAAT TTCACCAGCATATGATGCTATTCGTCAAGCACATCTTCAAAAGTCTGGGCCGTCGATAGGAGGTGGCACTGATTCTATGGATGTAGATAACTCTTCGCGA AGTGGATCTTTCATTGATCTCCCAAAGGAACTTTTTCAGATGCTTGCTTGTGCTGGACCTTATCTCTACCGTGATACTATGTTGTTGCAGAAGGTTTGTA GAGTATTGCGAGGTTATTATCTTTCTGCTCTTGAACTTGTAAGCGGTGGGGATGATGCTTTAAATCCTCATATGCACCTGAAGGACACAAGGCTAAGGGT GGAAGATGCTTTAGGAACATGTCTACTTCCTTCTCTGCAGCTGATTCCTGCCAATCCAGCCGTCGCCCATGAAATTTGGGAACTTATGAGTCTCCTTCCG TACGAGGTGCGATATCGTTTATATGGTGAATGGGAAAGAGATGATGAGCGCTTTCCAATGCTCTTGGCTGCGAGACAAACTGCCAAGTTGGACACTAGAC GTATTTTGAAACGACTGGCAAAAGAAAACTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCTATGACAGTCCTTCGGACAATTGT TCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCTTTTAAGTATTTAACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATC GAGCGATTGGCACTTGGTGGACGTGATAAGTTAAAGGATGACGGTCTTAATTTGTCAGATTGGCTTCAATCGCTAGCTTCATTTTGGGGTCACTTGTGTA AAAAGTACCCATCAATGGAATTAAGGGGCCTTTTCCA BLAST |
Tissue | flowers |
Gene name | LI_gene_81652; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39791
Blastp | THO complex subunit 2 from Arabidopsis with 74.23% of identity |
---|---|
Blastx | THO complex subunit 2 from Arabidopsis with 74.23% of identity |
Eggnog | tHO complex(ENOG410XQ2A) |
Kegg | Link to kegg annotations (AT1G24706) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446196.1) |
Pfam | THO complex subunit 2 N-terminus (PF16134.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |