| Id Trinity | FTRINITY_DN58967_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_38436 |
| Sequence | GATGTTAGGAGGTCAAGGGAGTCCAATGCCTTCACAAAATTCTTTCCCTTCGCTCGTATCGCCGCGTACTCAGTTCAACAACATGAACATTGTAGGAAAT ATGTCCAATGTAACTTCAATGCTGAATCAATCTTTCCCAAATATAGTTTCAAATCATGGGCTCTCTATCTCTAGTTCAGGAAGTACCCAGCGTGGAGTGA TTGATACTGGAGCTGAAACAGATCCGCTCTCCGGTGTTGGCAATGGAATGAACTTCGGTAATTCTTCATCCTCGTTTGTACAGGCAAATGCGGTGAATGC TGGTGGTTCTTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACTCTTCTGGTAATCAACAGCTTGAACCTCAAAATTTCCAACATAGTCAGCAGTCAATG CAGCAGTTCTCTGCTCCTCTGAATACTCAGCAACAACAGCAGCAGCAACACTTTCAATCAATCCGAGGAGGGATGGGTGGTATTGGATCAGTAAAGTTGG AGCCGCAGCTAAATAATGATCAACTTGGACAACAGCAGCAACATCAGTTGCAATCATTGAGGAGTCTTCCTCCAGTGAAACTGGAACCGCAACAACTTCA AACAATGAGAAGTCTTCCACCAGTAAAAATGGAGCCCCAACATTCTGATCAACCGTTGTTTTTGCATCAGCAACAACAGCAGCAGCAACAACAACAACAT CAGCAGCAACAACAGCAACTCCTCCACATGTCTAGGCAATCATCTCAGGCTGCTGCTCAGTTTAATCTTTTGCATCAACAGAGGATTTTGCAATTACAGC AACACCAGCAGCAACAACTCTTGAAGGCAATGCCTCAACAACGGCCTCAATTCCCACAACAATTTCAACAGCAGAATATGCCTATTAGGTCTCCTGTGAA ACCATCATATGAACCTGGGATGTGTGCTAGGCGTTTGACACACTATATGTATCAGCAACAGCATAGGCCTGAAGATAACAATATTGAGTTCTGGAGGAAG TTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGCGTTTCTTTGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCCCAGGATGTAT GGCACTGCGAAATATGCAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAAATAAAGTATGAAAGTGGTACTTT GGAAGAGCTGCTTTATGTTGACATGCCACGCGAATATCATAATTCTTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTCTTTGAG CAACTACGTGTTGTTCGTGATGGTCAACTTCGAATAGTGTTTTCTCAAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGGCATGAAGAGCTCA TCCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGTCTCTTACTCAAAGTGCCACGGCAAATATATCTGTTCC AGAGTTACAAAATAATTGCAATATGTTTGCTTCATCAGCCCGTCAGTTGGCTAAAGCTTTAGAAGTTCCATTAGTTAATGATTTAGGATATACTAAGAGA TATGTGCGCTGCCTACAGGTAATGGTCCACTCCTAAAACATTGCTTAGTATTATTTTCTAAACATTTATTCTACATATCTATAGGAAAATATTTAAGTGT CTTTATTTCCTTTTAATGAATGCTATTTATGCAAATTTGTGAACAGAACGCTGCGCCCTTGGTTGTTTTGAATAGGAAATGGTTACTTGCTTTTGTTTCT CTTAATGTGACTGCAAAGTATAGCAATTATTTTAGTCTCTATTTCCTGAATCAATGTTTGTATTAGCCTATTAGGGTCTTCTCCCGAGAGAGGACCTGGG ACCGAGGCAGTCAAAGTCACAATCTTCCCCTTAAGTTTGTACGATTTTGCTTCCTTCAGCATGCTTTCTTTTTGCAAAATCTGCGAGTCAGCTTCGCCTT GTGAGATCGTCAGGGAAAAGTTCATGAAATCTGGGCGGTTTTTGTTAGCACCGTGTTTATCTGGGGAAAGGAATTGGGCCAACCCGCAACACAACCTGAA GCCCATTAAAAAACGACCCCTAAAATCTTAGTTGCCTGCCTTCTGCATCCACTCAGAGGCATTCATTTGGAAGAAAAAACATTGAAAAAAATCCCTAATC TTATTTGCCCTCTTTGTTCCCTTACTCCACTACTTCTTTCTCGTTGCGGTAGTCGTTGGTTGAGTTTGTCTGCTTCGGATTTTTTGGTCCTTTTGCGTGG GTGCTTGCTTACTGTGGACATGTGACTGGGTTTGGTTGTTGTGAGCTTGGCTGTGGCAGATGCGAGTCAGAAGATGAAGAGGTTACTGCATTGAAACCAT TGAAGAAATTACTTTTTTGTCTTCTACAACTTGCTGGATGAGAAATGTGTTTCATCGTCTTCTACAGCTTTCTCGGGACCAGTAATGGTTGGTTAATGTT TCAGTGGTGCTTTTATATTTTGGTAAATAAAGTTTTGTCTGTATTTTTTTTTTTTAAGAATCAAGGGCTAAATAAATCAGGAATGCTTGCCATTTCCAAA AATAGAAAATAAATATTCCCTTCGGTAAATTGATCTGAAAAAAAAAGTGAGCTTTATTGAGGAAGATACAGATTCAATTTGACAAACTTGGTTTATTGTG TCTTGTTTATGTTGTAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAACCGGGACTGGACCTATGGGTAAGTTAGTAAT CTGTTTACTGGTTGACGGAAAGTGCAGAAATGTACTTGTCTATAACATAATGTTTTATTATACAGAGACCATTTGTTTTACCTCCCCATACCATTTACTT TTCTACTTTACCTTTGAAAGCTATGCTTAGTAATGGAATCAAATCCAGGCGGCATTGCCTTTATTTTATGAAGAGACTTGAAAATACATGGTTTGAAGAT TGTCGATGATCTGCTAAAGGTTTTATCTTGGAGACACAAGTTGGTGTAACTACTCGTCTGTTAAGAGACTGTCTGAATTTTAGGGATGGGGGCATTTTTT ATTGAGGATTGGTTGATGTTTCAAATAAGTGTATGTTTTGATAATTAAAGAGATGGAATAATTCTCTAGTCTTCAAATCGGATATATTTTTGTTATTTAT GCTTTCGTGGTTAGAAGAGAGAGGGGAGGGATGTGAGAACCAATTAGCATATTTATGCTTTTATTTTGTGCCCAAGCCCTGTCTCTGTATCTGGTATCAA TGTTGTTGATGCCTTTTAAGATTAAGATATCCTCATGGCTATTTGGAGTGTCAAGGACACTCTGCTGAGAACTTTTACAATCATGGGTCATTTTATATTT GAAGATGGGAAATTTGGTAATGTGTGGGTTTTTTGTCGGAGGCTGATGGAAGTAAACCAAACTTCTTCAGAAGCAAAGTGTTACGTATTTTGCCTTTTGT GTCCGAAGTATGGAACCATTTTTTGTACATGACTTAGATGGGCAACCAATTTTGGAGTATTCTCTCACTTTAATCTCTATTCATAAACAGTTCAAACTCT TTTGACAATGGTTTTGTAATGTCATGTAACTTCACCACAGGATAGTTTTGGTCCTTGATAACGTTTTAGTTCGGTTATTTTTGTAAATTAATATTTATTT CCATTTGTCTAATTGTTATAGGGAAAAATTGATTGTTTCTTTTTCTTGCCTTCTCTCAGAGAGCTTAGCTAAATTCCCTCGCAGAAATAGTGGTTCAGCT GGACCTCGCGGTCAGGCACAACAGCATGAGGATCAATTACAGCAACAGCAAATTTTGGCTCATAACTCAAATGGTGATCAAACTTCATCTTCGCAACCCA GTGCCACCCAATATTCTTCTAATAACGGTATGGTTAGTGTAAATAACTCTGTTAGCTCAGCACCTGCATCAACCACCACAAGCACTATTGTTGGACTTCT CCACCAAAACTCTATGAATTCTAGACAAAATTCAATGAACAATGCAAGTAGTCCATATGGAGGTAGCTCTGTTCAGATTCCATCCCCAGGTTCCTCTAGT ACTATGCCACAAGCCCAACCGAACCCATCCCCTTTTCAAGCACCAACACCATCTTCATCTAACAACCCCCAGCAAACACCTCACCCTTCCTTAACTTCTG CCAATCACATGAGTACAACAAACTCACCTGCTAATATTTCCATGCAACAACAGCAGCCATCTCTTTCCGGCGAAGCTGACCCTACCGATGCTCAGAGCTC AGTCCAGAAAATCATACACGAGATGTTCATGTCGTCCCAGATGAACGGCACAGGTGGGATGGTTGGTGTTGGATCTCTCGGAAATGACATGAAAAATGTA AATGGTGTTCTGCCATTGAGTACCAATGCAGGGATGAACAGTGGCAATGGCCTGATGGGCAATGGTGCAGTGAGCACTAATTCAGGCGTCGGGGTTGGTA GTTACAGGACAATGAATTTTGGTCAATCTGCTATGGCTAATGGAATGAGAGCTGCTATGAGAAATAACTTAGTCATGAATGGAAGGGGAGGAATGGCGTC CATTGCCCGGGATCAAGCTATGAATCATCAGCAAGATTTGTCGAATCAATTACTTAGCGGGCTAGGAGCCGTAAACGGTTTTAATAATCTCCAATTTGAT TGGAAACCATCTCCATGAAAGCTGCTTTAAACGGTATCCATGTTGTGGTTCCTTACAGCTGCTTTTGCAGCATGAGCAAATGGTAGAATTGCCTGTGGCA CTTTGATGATGGAGGAATTCAAATAGGTGATGATACATAGGCCAAACTGCCAATATAGATTTCATATATAAAAAAAAATGAAAATTTGTTGGCTGGTTGT GTTGCTGATGGGGTTCTGTTTTTTCTTGTGGATTTCAAGTGTAACCTTTATTTTAATTATTCTATCTTCATGGTTTTCACAAAATCATCCATGATACATG TGCATACTTGAAGATGAAAACCCTTTTTGGCTGCAAAAAGTAACTGGTTGTTGGGAGAATAGAGTTAGATACTATCCATAGTGATAATTAGTTAAGAGAA TAAAATGTTTCTAGGATAAGTAGATAAGTTATTTCCTTCTGCTAATAAAATCATGACATGTGTCTTGTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81655; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38436
| Blastp | Transcriptional corepressor SEUSS from Arabidopsis with 67.15% of identity |
|---|---|
| Blastx | Transcriptional corepressor SEUSS from Arabidopsis with 74.3% of identity |
| Eggnog | NA(ENOG410XT7C) |
| Kegg | Link to kegg annotations (AT1G43850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434293.1) |
| Pfam | LIM-domain binding protein (PF01803.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |