| Id Trinity | FTRINITY_DN58972_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_39114 |
| Sequence | CACACATATTCCAACACCATCAATATACCCTCTCCATTTTTTTGTTGCTACCACCAGCTCTGCATGAAAGTTATTATTCACCCTATTACATTTTCACACC ACACTCTATCCCTCAGATTAATCTTTAATCTTCAATCCAAACACTACCCAATCGAAAATAATTGAAAAACAACATAACCTGAAGAAGAGGAAGAAGTTAG AGATATTGTTACTTCCGTACACCTTTTTTGACCCAGTCAATCCTTGCGCCGCCACGTCTTTACCTAACGTATAATCACCGTGTCAGCGTTTGATACGACG TCGTTTTCTCAATTACTATAAAACAGCTCAAACTTTCGGTTGATCTGTTTCTTCTTCTTTTTTTGTGTGATTGTTGATGATGGGATCGAGAGGGTTGTTC GGGTGGTCCCCACCTCATGTGCAACCTCTCACGCCGGTTTCCGAGGTATCGGAGCCACCTGAGTCGCCGTACGTGGACCCTGGCGCTGAGACCTCCGCCT CACTGCAGGTGGAGCTCGAGGAGGAGGAGATGGAGGAGCCGGAGGACATGGAGCCGCCTCCCGCCGCGGTTCCTTTCTCCCATCTCTTCGCCTGTGCCGA CCGCTTTGACTGGTTTCTTATGGCCGTTGGTTCGATCGCCGCGGCCGCTCACGGCACGGCGCTGGTGGTTTACTTGCACTACTTTGCTAAGGTTATTCAT CATATGCAACCTCAGCAAGGTTCTTCGGGATCTGAGGAGCAGTTTCATAAGTTAAAGGAGCTTGCTTTGACCATTGTTTATATTGCTGGGGGAGTTTTTG CTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTGACTGGAGAACGGCAGACTGCTGTCATCAGGTCAAAATACGTTCAAGTATTACTTAACCAAGATAT GAGTTTTTTTGATACTTACGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAATCTGCTCTTAGTGAAAAAGTATGTCTT TCTCTAAATTTTTTATTTGCAGAGAATATCTAATCTCAAATGTCTCATACAACATGTCAATTGACATTTGATGATACAGGTTGGAAATTATATACACAAT ATGGCTACATTCGTCAGTGGTCTTGTTATTGGTTTTATCAATTGCTGGCAGATTGCATTGATAACATTAGCCACTGGTCCATTTATCGTTGCTGCTGGAG GGATATCTAATATATTCCTCCATAAGCTTGCTGAGAATATTCAAGATGCATATGCCGAAGCCGCCGGCATTGCAGAGCAGGTTATTTATTGTTTAAATTT TAATTCATTTTCACATTAAACTAATGATATGCTTTATGCGCAAATTCAGTCCAATGATGGATTTTAATGTTGCTATATATAGGAAGCAAGAAAGGCGGAC TTAATAGTTTAAGTCTGTTTTAAAATCTGTAATACCACATTAGTTTTTCTGCATTAATACTTCTAATACTATTAAGTGTAAGTGTAGTACATTTTATGAC TGGAAATCTAGAGGGAGTTTCTGCCACAAATATTAGATAGAATCAAATTTTATCTTTTTTCTTCAGCATGTTATGGATATAAGACTTGCTTGTGCTTGCT TTTTACTAGGACAGTATATATCTTTTGATAGAAAGGGTACTTTATTAGAGAGAAAAGAGGGAAAGTACAACTGGGGAGAGTATAGTATATTTTCCAAAAT AGAAAATTCTATGCACAATAAGGAACATGGAAAACCTTAAAAGGCAATGAGAAACCCAATATTTCCATATCAGAAGTACCAATAACCATCTAGCATACAT GATCACAACACCAAAAACAAACCCTGAACATAATCCTATCATGACTATCATCTAGCAGCATGTTTTGAGGCACAGAGGTACTCTCAAATATTCAAATTTG CTCCCAGCCAAAAGGTTTTATTATGCTCAAATGGCTGCACGGTTTTTTCGTCTGCCGTCTAAAGTAGATCATCAACTTTAGTCATTTTCAGATGGAAAGA TAAAACCGTGTCTGGCTTCATAAAATGGGATCTCTGATACAAAAGGCTTCAAGATTTCTTCTACTAATTTTCCCTATAATAATTAGATAACGTGTCACAA AGTGGCAAATTAAATGCACTTGAAAAAGTTATTTATGTCATTATTTACCAAATAAAATCTAATTTTCTAAGTCAAGTTATTTATGCCTTTGAAGTTTGAT CTATGCTTCTGTTTGCCTACCTGCCTCATGAAACCATGGTATATAACAATTTTGAAGTTTACTATATATGGTGGGAAGGAATTGAATATGCTTTACGTAA TTGCTTTTTTTGTTTATAATTTAATGTATTCAATTGCATTTGGTGAATGAAGAATAGTGAAGTTATCATTATTTGGTAGCTCATTTTAGTGCCATTGGTT CTCAGTGACTATATTTTCTTCTGACGCAGGCTGTTTCCCATATAAGAACCTTATATGCATTTACAAATGAAACATTGGCTAAATATTCATATGCAACGTC ACTCCAAGCTACTCTTAAATATGGTATATTAATAAGTCTTGTACAAGGTCTCGGTCTTGGATTTACATACGGGCTTGCAATATGTTCTTGTGCATTACAA CTCTGGGTTGGAAGGTTCTTGGTTATGCATGGAAAAGCTCATGGTGGTGAGATTATTACAGCTCTCTTTGCTGTGATTCTAAGTGGCCTGGGATTGAATC AAGCAGCAACAAATTTCTACTCTTTTGATCAAGGTCGAATAGCTGCTTACAGACTATTTGAGATGATAAGCCGGTCATCCTCGTCTTTCAATCATGATTG CGATGCTCATAGTTCTCTGCAAGGGGATATAGAGTTTCGGAATGTTTATTTCAGTTATCTTTCCCGTCCTGAAATCCCTATCTTGAGTGGGTTTTATCTC ACTGTTCCCGCTAAGAAAGCTGTGGCACTTGTTGGCAAAAATGGTTCGGGGAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCTACATTGG GAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTTAAACTGGAGTGGCTGAGGAGCCAAATAGGACTCGTCACCCAGGAGCCTGCTTTGCTCAGTTT GAGTATCAGGGACAATATTGCTTATGGGAGGGATGTTACCTTGGACCAAATTGTCGAGGCTGCCAAAGTAGCTCATGTACATACTTTTATCAGTTTGTTG GATAAAGGTTATGACACACAGGTTGGCAGGGCTGGCTTAGCTTTGACAGAAAAGCAGAAAATAAAACTTTCTATTGCGAGAGCTGTGCTTTTAAATCCAT CTATCCTCCTGCTCGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGTTAGGGCGCTCAACAAT AATAATTGCCAGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCGACTTGTTGAAATGGGTACTCATGATGAATTATTG ACCCGGGATGGCTTATATGCAGAGCTTCTCCGACGTGAAGAGGCCGCAAAGCTTCCCAAAAGAATGCCTGCTCGTAACTACAAGGATACTGCAGCTTTCC AAATTGAGAAAGAGTCTTCAGAAAGTCAGAACTTGAAAGAATCCTCATCCCCTAAATTGATGAAATCACCCTCTCTTCAAAAACTTTCTGCAGTATTTCA GCCTTCAGATGCCATCCTTAATTCACAAGAATCACCAAATGTTCAGAGCCCACCTCCTGAGAAGATGCCGGAAAATTGTCAAACTTCGGATGCAGCAGAT AAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTACCCGAGTTACCGAAGATTGATGTTGAATCTATATATCGGCAAACATCAAAAGGTT CTGACCCTGAATCCCCTGTTTCACCTCTTTTAACATCCGATCCTCAAAATGAACGTTCCCATTCACAGACTTTTAGCAGACCAGATAGTGGCTCTGATGA TTTTTCAGTGAAAATGAGGGAAACAAAAAGTGCACAGCATCGAAAACAACCCTCACATTGGAGGTTGGCAGAGCTTAGTCTTGCAGAGTGGTTTTATGCT GTGTTAGGAAGCATAGGCGCTGCCATCTTTGGTTCTTTCAATCCCCTGCTTGCTTATGTTGTTGGCTTGGTAGTGACAACTTACTATAGCATTGATGGAG CCCGCCACTTTAGAGGGGAGGTGGAGAAGTTGTGCTTGGTCATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTTTTGCAGCATTTCTACTTCGG TATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGTTGGTTTGATGAAGAAGAAAACAGTGCT GACAATTTATCAATTCGATTGGCCAATGATGCTACATTTGTGAGAGCTGCTTTTAGTAACCGGCTTTCCATATTTATACAGGATAGTGCTGCAGTAGTTG TTGCTATTCTGATTGGTGTTTTGCTGCACTGGCGAATAGCACTTGTGGTTTTGGCAACACTTCCAATCCTCTGTGTTTGTGCGATTGCCCAGGTTTGCTA CTCTTGTTCTGGTTTTCTGATATAATTTCCTCCTGTGGTTGGGATGAGTTTTTATTTCCTTTTCGTGTCAATTCACTTTGTTGAAGTTTATGCCTCTTAC GAGATACAGTGGTTTTGGAATTTCAAATTTTTTAGATCTTTTTCATGTCATATAATAAATATAAATAAAATTGTGGATTTTAATCCTAAATTCTGTGATT CTTGTTCTGGACATCATGTTTAAAAAGGAAAAGTTTTCTCATGGAAAAAGGAAAAAAAGATAAGTTATGGAAGGGGGATATTTTCCCTGTGTGTGCGGAC GACAAGCCTCTCGCTCTCCTTTTTTGGCATAGAATTTATTTGTCTCTTTCATTGTGAAATTGAAGTCAAAGATGCACCTTGGCGAAAACTAAAAGACCAT TCAGTTGTGTCTGTTTTTACAAATTTGATATTGAAATTATGTGGCTTTGCAGTTACTATAATATATATTTCCCTGTTTCAGTTTTCTAATTAATGGTTTG TAATGAGTGTAATTTGTTAGGGTGTATAGCTAATTTAATTCTTCATCATATTTTATTTTGGCATAAAGAAGAATTTGCTTCCTATAGTTTCCGATCAGTT TTTGATCCATATAGTTTCCTACCGTGAAGATGTTGGTATCTCAAGACCAATACCTTGATAATTTGAAACTACAGGAACCACTCCTTCTTGGTAATGGGGA CAGTTAGACCGATACCTTAGTGAGTATAAGCTGTAGGGACTAAATCTAAAATGAGGGAAATACAAGTACCCAAACAAGAAACAGAATAAGAACCAAATGG GTGGAAACAATAGACATGAAAAACATAATTAAACCTTTTATATTTCTGAATCTGATTAATAAATCTGAGTTCTCTGTCTTTGTGTGTTTGTGCGAGTGGA TGCATATTTTTTTGCCTTGCAGCATCAAGGGTTTCATGACTGAATGCTAGTTTACCAATTTTTACTGGTTCATTTGCTTTTATGGTTTTTCGTAATACAT GTTTTGAGTGCAGCCTACTTGAATATTGCAGAAACTTTGGCTTGCTGGATTTTCGAGAGGCATACAGGAAATGCACAGGAAGGCATCTCTGGTTCTTGAA GACGCAGTCAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAGCTCTACAGGCTGCAACTAAATAAAATACTTACGCAGAGCT TTTTTCATGGGGTTGCCATCGGTTTTGGATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCATTATGTATTAA AAATAGGTATGTAAGTCCAACCACTGCACTGAAGGAGTACATGGTTTTCTCATTTGCTGCATTTGCACTTGTGGAGCCTTTTGGGTTGGCTCCTTACATA CTTAAGCGACGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGCGTGCCTAAAATTGACCCTGATGATAACTCAGCATTGAAGCCGCCCAATGTAT ATGGAAGAATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCAGAAATGTTGGTGCTCAGCAATTTTACTCTAAAAGTCAGTAGAGGACAAAC AGTTGCGGTTGTGGGAGTGTCAGGGTCGGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTACTAGATGGG AGGGACTTAAAGCTATATAATTTAAGATGGTTAAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATTTTCTCGACAACCATAAGGGAAAATATCA TATATGCCAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCGCATCATTTCATTAGCAGCTTGCCTCATGGTTATGATAC TCATGTTGGGATGAGAGGCGTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81714; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39114
| Blastp | ABC transporter B family member 6 from Arabidopsis with 78.01% of identity |
|---|---|
| Blastx | ABC transporter B family member 6 from Arabidopsis with 79.18% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G39480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427683.1) |
| Pfam | ABC transporter (PF00005.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |