| Id Trinity | FTRINITY_DN58990_c2_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_39831 |
| Sequence | CTATGACTCTACACGAAGACTACTACTCTGTCCACACGGTTCATACGCTCATTCTCCCACTCCCATCCCTCTTCAATTTTCAATATCCATTCACTCCTTT CTTATGACCCCACATTCATAACTGTCACTCAAATCCTTTATTTCCCATTCTCCATTTATACTCAACCAACACTTTCCCCTCACCAATTCCCCAAACCATG TCTTCTCCTTCTCATTACACTCTCTTCCTCTCTTTCACCCTCTTAATCCTCTGCGCTCACCTCCACGCTCAGGATCTACTCTCAGATGGGGTCCACAACG CTTCTAACCACACGCTTCTCAGACTCCCTTCAAATGACGTGGAACCTTCTTCCACGTGTGAGCAGACGTATGGATTCTTACCGTGCACCACCACCGTATT GGGAAACACGTTCTTGATAATTGTGTATGGGTTTCTCATGTACACTGCTGCTACGTATTTGTCCGCTGGTAGCGAGCTTTTGCTTGAGATCTTGGGACCT GGCATCGTTGGAGGATTGTTTCTTCCTATTCTCGGTGCTCTTCCAGATGCCATGCTTATTCTCGTATCTGGACTTTCCGGTACTGCTGAGACTGCTCAAA GTCAGGTCTCTGTTGGAATGGGTCTGCTAGCTGGGTCAACAGTTATGCTTCTGACTGTAATATGGGGGACCTGTGTAATTGTTGGCAAGTGTGACCTTGA AGGTTCAATTGCAATAGATTCGCGTGATACCAGGGGATTTCATTTAACCAGTTCTGGTGTTAGTACTGATATTTGGACAAGTTATTCTGCTAGGATTATG GTTTTATCTGTCATTCCATTTTTGATCGTTCAGTTACCGCAATTGCTCAGCTCAACTTCAGGAAGGCACTTCGCTATTTTGATTGCTCTTGTTGTCTCCA TCTGTTTATTGATTGTGTATTGCCTTTACCAGGTAAATTTCTTTTTATGGTGCAATTGTTTTTCCTTCTGCATTCTGATCTCTTTCTATATCCAAACACT TCTAGTTTTGTTGATAGTATTTTGTATATATATATGTACATATACATTTCACCAATGAAGAAATGGGTAGTGTAGGACTTCAGTCTTTTGTTATAGTTAG GTTTCTTTTATTTTTTATCATGATTTAATGAAATTAGTTTTAATTGATATCGACCTGCACTGTTGTGCTTAACTCTGATGACACATTCCATGGATGTTAT GGTTAGAACTTTCAGTAGCTGTATTTGGACGAATGTTTATTCTCTATTATTTGGACACCTCGTCAGTCTTTTTATTATTTTAAAAATTGATAAAAATTTA ATAAAAAAATGGTACAGGTTTTCCAGCCCTGGATACAGAGGAGAAAACTTTCATATGTTAAACACAAACATGTAATCTTAGGACTTTTGAAACATTTGAA GCAACGTGCATTGGGAAGGCTGCTAACAGAGAATGGTGAACCTAACATAAAAATTATAGAAAAGTTGTTTGATACAATTGATGAGAATAAGGATGGTGAA CTTTCTCACGGTGAATTGAAAGCGCTGGTTGTTGGAATTCAATTTGAGGAGGTTGACCTGGATCATGAAGATGCTGTGACAAAAATAATACAGGACTTTG ATGTTTCGGGTAATAATCGTGTTGATAAAAAGGAATTTATTAGTGGCACTTGTAGATGGCTTCAAAAGGCTAAGGGTTCTCGAGTTGCATCTGGTGATGA TGGTGCACACACAATGAAGTTTTTAAGTGACTTTCACGATGAAACAAGAAGGGAGCATGATCTTCTGGATGTGGGGGGTCACGATGATGAAGTTGATGAG GGTGTTGGAAATGCTGGATGGACTTCCATCAAAGCAGTGCTTCTGCTTGTGCTGGGTTCTCTTATTGCTGCTGCATTTGCTGATCCTCTGGTTGACGCAG TTAATAACTTTTCTAATGCTACAAGTATTCCTGCTTTTTTCATTTCCTTCATTGCTCTGCCTTTAGCCACCAATTCAAGTGAAGCAGTGTCGGCAATAAT TTTTGCTAGTCGTGATAAGAGGCAGACTGCCTCACTAACATTTTCCGAGGTTTGTTTTCTTTCTTCACGCTATGTTTCTTTTACGCACCAGGATGCATGC ATGAATTTAACATAAAATATTTGGATTCTAGTAATTTATTATGTTCTGGTTTTTCAAATAACACCATTAGTTCCCAATTATGTCCTTTTGAATAACCATG ATGCTGAATGGATCCCTATCATCTTCTGCAAACACACACATACACATATAATATTAGGGGGCAATGGAGAGAGCAAATAGTAATAAAAAGTGAAAAACTC ATGTTAAAAAGCAACCTTTTGGGTAGTGTATTTGTAATAGCACATTCCTGTTTGTGCCTCGAATTTGTCTGTTTTAGCAATGATTATCATGGCTCTCAAT TGGTCTCTTGGATGCTTAACGTGGTTACAGGTAGATCGATAACGATAATGGTAGTTCTGGTTGTTGGCATCATCATCATTGTAATGTTTGTTCATGGTTG CTAAATTATATATTTCTTACCTTGGGGCTGCATGGTCTGGGATAAATATTTCTCTATGAATTTATCTCATCATCTCTCGGCATAGTGTTTAGGTTGTTTG CCTTGTGACCTGGAGTTCATGAATTCAGTCATGGAGGTTAGTGCTAGGATAAGGCTGTGTACATCTATCTTCCCAGACTTCACTAAGTCGAAGCCTCGTG TACCAGACTGCCTTTTTATCAACTACATTATATAAACCATGCCAGTTAATGTGGCTCTCTTCTACTTAGATGCAACATATCAGGCATTTAAAATCAATTA TATTTTACCTTTTTTGCAGATATATGGGGCAGTGACAATGAACAATGTGCTTTGCCTATCAGTCTTCTTGGCCCTGGTTTACGCGAGGGGTTTGACATGG GACTTCTCTTCGGAAGTGTTAGTTATTCTCGTCGTCTGCGTCGTCATGGGCGCCTTTGCCAGTTTCAGAACCACCTTCCCTCTATGGACATCCATAGTAG CCATCCTCCTTTATCCTTTCTCCTTGGCATTAGTCTATGTTCTTGATTATGTATTTGGTTGGTCATAGACCATATAACAATGTTTTCTATGTGTTAGTGC CCTGTATGGCTATTACTCTTGGAGTGTGTGTTTATTATAAGTTGTGTTCTAGAGATTGTGTGGTGTTATTGATTCCAAGTTGGGATTGACATGAAATCGA GAATTTGGGATTTTAATTATGCCCTTTTCATGCATTCTTTATTAGTATAGTTTTTTTTGGTATTATAAATGTATCCCTTCGTCTTTTTAGGTAAGGAACT AATCATTTTGGGGTGTAGTTATTTCTCTAAACAAGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81854; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39831
| Blastp | Sodium/calcium exchanger NCL1 from Oryza sativa with 63.31% of identity |
|---|---|
| Blastx | Sodium/calcium exchanger NCL from Arabidopsis with 70.61% of identity |
| Eggnog | Calcium-binding EF hand family protein(ENOG410ZVKW) |
| Kegg | Link to kegg annotations (4325568) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443893.1) |
| Pfam | EF-hand domain pair (PF13499.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |