Id Trinity | FTRINITY_DN58990_c2_g1_i17 |
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Name Transcript | Ll_transcript_39833 |
Sequence | TGATATTTTATGATCCTCACTCATAATTTAACCAAAAAATGTCAAAAGTTTCTATAGCTAATAGACTCTATTTATAGTTTGATCATCAGAACACATACCC CTCTCACACCATGGCTTCTTCTCACACCACTCTCTTCCTCTTCCTCTCCCTCTCCCTCCTGATCCTCTGCGGTCACGTCCATTCCCTCGATCTACTCTCC GATGGGGTCCACACAACTTCCACCTTCTTCAACGACACATTTCTCAAACTCCCATCAAACACAGTGGAACCATCTTCCACGTGTGAACAGACCTATGGGT TCTTACCGTGCACCACCACCGTATTTGGAAACATGTTCCTCATAATTGTGTACGGATTTCTCATGTATACTGCTGCTACTTACTTGTCTGGTGGTAGTGA GCTTTTGCTTGAGATCTTGGGCCCTGGCATCGTTGGTGGTTTGTTTCTTCCCATTCTTGGTGCTCTTCCTGATGCTATGCTAATTCTCGTATCTGGGCTT TCAGGTAGTAAAGAAACTGCTCAAAGTCAGGTCTCAGTTGGAATGGGACTGCTAGCTGGGTCAACAGTTCTGCTTCTGACAATAATATGGGGGACCTGTG TAATTGTTGGCAAGTGTGACCTCGAGGGTTCAATTGCGATCGATACACGAGATACTCGGGGATTTCATTTAACTGGTTCTGGTGTTAGTACTGATATTTG GACAAGTTATTCTGCTAGGATTATGGTTTTATCTGTCCTTCCGTTTTTGATTGTTCAGTTACCACAAATGCTCAATTCAACTTCGGGGAGGCACTTGGCT GTTTTGATTGCTCTTGTTGTCTCCATCTGTTTATTGATTACTTATTGCTTGTACCAGTGTTTTTCATTCTTATGAAAATTGAGAGGGGAAAAAACGGTGC AGATTTTCCAGCCCTGGATACAGAGGCGAAAACTTTCATATGTTAAACACAAGCATGTTATCTTAGGACTTTTGAGACATTTGAAGCAACGTGCATTGGG AAGACTGCTGACAGACAATGGTGAACCTGACGTAAAAATTATCGAAAAGTGAAGTTACCTCTCCTTTCTGCTTTGACTTAAGACATGTTACTTATATAGC ATTTGTTGTGGTATTTTAATATCTTCATCCGTTTCGTTGCCTCTGCCTTCTCAATGGAATATACAGGTTGTTTGATACAATTGATGAGAATAAGGATGGT GAACTTTCTCATCGTGAATTGAAAGCACTGGTTGTGGGAATTCAATTTGAGGAGATTGACCTGGATCATGAAGATGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_81854; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39833
Blastp | Sodium/calcium exchanger NCL from Arabidopsis with 67.81% of identity |
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Blastx | Sodium/calcium exchanger NCL from Arabidopsis with 64.97% of identity |
Eggnog | Calcium-binding EF hand family protein(ENOG410ZVKW) |
Kegg | Link to kegg annotations (AT1G53210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456227.1) |
Pfam | Sodium/calcium exchanger protein (PF01699.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |