Ll_transcript_39840

• Id Trinity: FTRINITY_DN58990_c2_g1_i20
• Name Transcript: Ll_transcript_39840
• Sequence: ATGTCTTCTCCTTCTCATTACACTCTCTTCCTCTCTTTCACCCTCTTAATCCTCTGCGCTCACCTCCACGCTCCGGATCTACTCTCAGATGGGGTCCACA ACGCTTCTAACCACACGCTTCTCAGACTCCCTTCAAATGACGTGGAACCTTCTTCCACGTGTGAGCAGACGTATGGATTCTTACCGTGCACCACCACCGT ATTGGGAAACACGTTCTTGATAATTGTGTATGGGTTTCTCATGTACACTGCTGCTACGTATTTGTCCGCTGGTAGCGAGCTTTTGCTTGAGATCTTGGGA CCTGGCATCGTTGGAGGATTGTTTCTTCCTATTCTCGGTGCTCTTCCAGATGCCATGCTTATTCTCGTATCTGGACTTTCCGGTACTGCTGAGACTGCTC AAAGTCAGGTCTCTGTTGGAATGGGTCTGCTAGCTGGGTCAACAGTTATGCTTCTGACTGTAATATGGGGGACCTGTGTAATTGTTGGCAAGTGTGACCT TGAAGGTTCAATTGCAATAGATTCGCGTGATACCAGGGGATTTCATTTAACCAGTATGTCATTTTTTATCATTCTTCATTAATATTATTTTCAATCTTTT GAGAATTAGCCACTAAACTTATCCTTGCCCAGGCATTAAGAAAGTGTTTCCTTTCTTTTGTGATCATCCAAGCAATCAACTTATGGAATTTTTCCACAAA ATATTCACTGTTTTATTATTTCTCGCCGTACTTATGCTGAAATTAGTGATGACTGTTGTCTTGGTTCTAGATAAATTATTTTGGAACTTTGAGGGAAGGG TTCTGGTTGAAACTGTATTATAATTCATCGCTGTCTTATCAGTCCCCCAAGAAACCATGATGCCCTAAATGTGCATCAGATGTGCTGTAATGTTGACCTG TCTCGAATGTATTTCCTTACTCTACTAAAATCTCAATTTGCAGGTTCTGGTGTTAGTACTGATATTTGGACAAGTTATTCTGCTAGGATTATGGTTTTAT CTGTCATTCCATTTTTGATCGTTCAGTTACCGCAATTGCTCAGCTCAACTTCAGGAAGGCACTTCGCTATTTTGATTGCTCTTGTTGTCTCCATCTGTTT ATTGATTGTGTATTGCCTTTACCAGGTAAATTTCTTTTTATGGTGCAATTGTTTTTCCTTCTGCATTCTGATCTCTTTCTATATCCAAACACTTCTAGTT TTGTTGATAGTATTTTGTATATATATATGTACATATACATTTCACCAATGAAGAAATGGGTAGTGTAGGACTTCAGTCTTTTGTTATAGTTAGGTTTCTT TTATTTTTTATCATGATTTAATGAAATTAGTTTTAATTGATATCGACCTGCACTGTTGTGCTTAACTCTGATGACACATTCCATGGATGTTATGGTTAGA ACTTTCAGTAGCTGTATTTGGACGAATGTTTATTCTCTATTATTTGGACACCTCGTCAGTCTTTTTATTATTTTAAAAATTGATAAAAATTTAATAAAAA AATGGTACAGGTTTTCCAGCCCTGGATACAGAGGAGAAAACTTTCATATGTTAAACACAAACATGTAATCTTAGGACTTTTGAAACATTTGAAGCAACGT GCATTGGGAAGGCTGCTAACAGAGAATGGTGAACCTAACATAAAAATTATAGAAAAGTTGTTTGATACAATTGATGAGAATAAGGATGGTGAACTTTCTC ACGGTGAATTGAAAGCGCTGGTTGTTGGAATTCAATTTGAGGAGGTTGACCTGGATCATGAAGATGCTGTGACAAAAATAATACAGGACTTTGATGTTTC GGGTAATAATCGTGTTGATAAAAAGGAATTTATTAGTGGCACTTGTAGATGGCTTCAAAAGGCTAAGGGTTCTCGAGTTGCATCTGGTGATGATGGTGCA CACACAATGAAGTTTTTAAGTGACTTTCACGATGAAACAAGAAGGGAGCATGATCTTCTGGATGTGGGGGGTCACGATGATGAAGTTGATGAGGGTGTTG GAAATGCTGGATGGACTTCCATCAAAGCAGTGCTTCTGCTTGTGCTGGGTTCTCTTATTGCTGCTGCATTTGCTGATCCTCTGGTTGACGCAGTTAATAA CTTTTCTAATGCTACAAGTATTCCTGCTTTTTTCATTTCCTTCATTGCTCTGCCTTTAGCCACCAATTCAAGTGAAGCAGTGTCGGCAATAATTTTTGCT AGTCGTGATAAGAGGCAGACTGCCTCACTAACATTTTCCGAGATATATGGGGCAGTGACAATGAACAATGTGCTTTGCCTATCAGTCTTCTTGGCCCTGG TTTACGCGAGGGGTTTGACATGGGACTTCTCTTCGGAAGTGTTAGTTATTCTCGTCGTCTGCGTCGTCATGGGCGCCTTTGCCAGTTTCAGAACCACCTT CCCTCTATGGACATCCATAGTAGCCATCCTCCTTTATCCTTTCTCCTTGGCATTAGTCTATGTTCTTGATTATGTATT
• Tissue: flowers
• Gene name: LI_gene_81854;
• Additional information: details;

Expression of Ll_transcript_39840

FPKM

• FPAB: 3
• FPNAB: 0.1
• LF1: 0
• LF2: 0
• LF3: 0.5
• LF4: 0.2
• UF1: 0
• UF2: 0.3
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_39840

• Blastp: Sodium/calcium exchanger NCL1 from Oryza sativa with 65.54% of identity
• Blastx: Sodium/calcium exchanger NCL1 from Oryza sativa with 64.31% of identity
• Eggnog: Calcium-binding EF hand family protein(ENOG410ZVKW)
• Kegg: Link to kegg annotations (4325568)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443893.1)
• Pfam: EF-hand domain pair (PF13499.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;