| Id Trinity | FTRINITY_DN58997_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_39246 |
| Sequence | CTATGACCAAGCCGAATCCTTATATTATGTGTCTCTTTCTCTTTCTCTCTCTATGAAAACACAAGACACAACACTCTCTCTCTCTCTCTAACACAAGACA ACATCAACAAACACAAACAATAACATCAACAACAGCTAATCTCTTTCTCTCTCTTCGTGTGTTTCTCTCATGTCCTTGCTTCTATGCCCTAATACCCCTT TTTCATGCAAACCTCATTTCCATCTTTCTCACTTTTCAATCCCATCAAAACCCATCTATTTCATCCACAAGCAAGGACATATATATGAACGATGAAGGAA AGCAAATCTTCATCACCTAAAATGATTAGCAGGGATTGGGTTATAAAGCGCAAGCGGCGAAAACTTACTCCCGGACTTGATCACTCTGGTGGTAAAGACC AATCGAACGGTAAAGAAGACAATTCAGGAACATCTGAATCTTCTCGTAGCGCTTCAGCTAAACGTACAGTAGACTCTGAAGTAGCTACTGATCGATTTTC ATCCAAGAAGAAAGGGAATGATGGGCATTACTATGAATGTGTGGTCTGTGATCGCGGTGGTAACTTATTATGCTGTGATAGTTGTCCTTGCACTTATCAT TTACAGTGTCTTCATCCACCCCTTAAGCGCATTCCTACGGGGAAGTGGCAATGTCCAAGCTGCTCTCGAGGGAATGATCAACTAAAGCCGATAAGCCACC TGGATTCAATTACAAAACGAGCAAGGACAAAGATTGCTACGGCAAAACCAAAAGATGGAGGTAACCCACTTAACCTGGATAAAATATCCCGAATTTTCGG AGATAAACTTATTTCAAAGAAAAGGTCCGCCAGCAAAGGAAAATCTAAGTCAACAATGGGAATCAAATTCTTCGAAAATAAACCGTCAGATTCCCCAGAA GATGAAACTTGCAGCAACAAGCGAAGTGACCCAAATCTAGGGAGTACCGTTGAAGGAACATCGTCATGTGTGGATGCTGATGAAAAGAAATCGAACATGT CCCCACCACCCTCCCTTATGGACATAGAGTCAACTTCACCCGCTAAGGAAGTTTCATCTCCCTCGATAATGATCAATTTAGTGGAAAATGATGATAATCA ACTGGAGGAGAAGTCTGATCTCTCTTGTAATAAAATTCCGGTAAGAAAACCACTTGTACTTGGTCTTGCTGCTGTTACAGAAGAAGTGGTTCAAGTGAGA AAAAGGAAGCACACAAAAGATGTTAGTGATAATGGTAGTCGAAAGAAGTCTAGGACTGAAAAAGGTAAATTTTTTATCGATACTCATGTGAAGCCCAAGT CTGGAGATAGTAAAGTACACAAGAAGCGAAAGTCTGCGACTCATAGCATTTCTGCATATGGATCAAAAGAGGATGTTGGAGATAAGAATTCGGATGTCCG GCAGAAGGATGAGAAGTTCCCTAAGTTAATGAAAGACAAATCAATTGGGCCTAATAAAGCAGGAAGTCTTGCACATAAAACTTCGGTGCATGAAGACAGT GCTATTCTTGAATCTCTACAGGTTGATCAGGTTCTAGGGTGTCGAGTTCAAGGTGAGAAAACAAACTCATTACGACACTTATCTTTGACCATTGTGGACG ACCCTCCTCCTGATGATTTGGAAATCTCAGAAAGCCAGAACAGACTGCAAGAGGACAATTCTGCTTGTGATAATGATCTGGATGTCGAAACAGCTGAAAA TCTCGATGATCCTCAAAACATCGTCAAGAGTTCTGATCAAGAAGAAATACTGAATAACACTAACAGTGTGGATGGAATTCATGTATACAGAAGATCAACT ACAAAGGAAAGCAAGAAAGCTACTGATGATTTAGGTTCCTGTGCCACCGATGTTAAAAACCAGGGTGATTCTTCTGCTGTATCTGCTGAATGTTCGGAAA AAACAAATGATAAGGTGGAGGCCGAGGAGAATATCAATGTTGCTTCAAGGAATGAGGATAACAGTGAGCTTCCAGAAATTTGTGAACAGCTCTCTCTTGA AACAAAACCGAAGGAAGTGGATGTGGAGAAGGGAACGAGTAACAGTGTTGATAATGAAGTTCCAGATGCTAATGTGGCTGAATCTTCATGTCTAAACGGA GAGAATGTTTCGTATGAATTTTTAGTTAAGTGGGTGGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAATCCCAGTTGAAAGTTCTTGCAAAGAGAA AACTAGAAAATTACAAGGCAAAGCATGGGATGGCGATAATAAATATTTGTCAGGAATGTTGGAAGCAGCCGCAGCGGTTGCTTGCTCTCCGTACTTCAGA AAGTGGAACATCTGAAGCATTTGTGAAATGGACTGGACTACCTTATGATGAATGCACTTGGGAAAGTTTAGATGAATCTGTGCTTCAAAATTCTTCTCAT CTGATTACACTGTTTAAGAAGTTTGAAACCCTCACGCTGGAAAAGGACGCATCAAAGGAAAATTCAACCATAAAAGGAAACGACTCTCAAAATGATATAT TTAATCTTACAGAGCAACCTAAGGAGCTAAAAGGCGGTTCTTTGTTTCCCCATCAGCTTGAGGCTCTGAACTGGTTGCGTAAATGCTGGTACAAGTCCAA AAATGTGATACTTGCCGATGAGATGGGACTTGGGAAAACAATATCTGCTTGTGCATTTATTTCAGCATTGTATTCTGAGTTCAAAGTTGCACTTCCTTGC TTGGTTTTGGTACCTCTTTCCACAATGCGTAATTGGCTTTCTGAATTTGCAACATGGGCTCCTGATGTGAATGTTGTTGAATACCATGGACGTGCCAAAG GAAGAGCCATAATTCGCCAGTATGAATGGCATGCTAGTGACCCAAGTGGATCGAATAAGAAAACAAAAGCCTATAAATTAAATGTGCTTTTAACCACATA TGAAATGATTCTTGCTGATTCTTCGCTTTTGCGTGGAGTTCCTTGGGAAGTTCTCGTCGTTGATGAAGCTCATCGACTGAAGAATGCTCAAAGTAAGCTT TTCAGTTTGCTGAATACATTCTCTTTTCAACATCGTGTGCTGTTGACGGGTACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTACTTAATTTCT TGCAACCAGCTTCATTTCCTTCTCTAGCTTCATTTGAGGAGAAATTTAATGATCTCGGGACTACGGAGAAAGTCAATGAGTTGAAAAAACTTGTTGCTCC TCTTATGCTCCGTAGACTTAAGAAGGATGCTATGCAAAATATTCCCCCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAGGCTGAATAT TACCGTGCAATGCTTACAAAGAATTATCAGCTATTGCGGAATATTGGGAAAGGGGTTGCCCACAAGTCTATGATGAACATTGTGATGCAGCTGAGAAAGG TCTGCAATCATCCATATCTGATACCAGGAACTGAGCCCGATTCTGGATCTGTCGAGTTTCTTCACGAAATGAGAATAAAGGCTTCGGCAAAGTTGACTCT TCTGCATTCCATGCTTAAGATTTTATATAGGGAAGGACACAGAGTTCTTATTTTCTCACAAATGACCAAGCTTCTTGACATTCTAGAGGACTATTTAAAT GTAGAATTTGGTCCTAAAACATATGAGAGAGTGGATGGCTCTGTTTCTGTCACTGATCGTCAGGCAGCGATTACACGTTTCAACCAAGACAAGAATCGAT TTTTTTTCTTGTTATCCACTCGCTCTTGTGGACTTGGGATAAACTTGGCAACTGCTGACACTGTGATCATATACGATTCAGATTTTAATCCTCATGCTGA TATCCAAGCAATGAATCGGGCACACAGAATTGGACAATCAAAAAGGCTTTTGGTATACAGACTTGTGGTCCGTGCTAGTGTTGAAGAGCGGATCTTGCAG CTTGCTAAAAAGAAACTGATGCTTGATCAGCTTTTTATAAACAAGTCTGAAAACCAAAAGGAAATAGAAGGTATTTTAAAATGGGGAACCGAAGAACTCT TCAGTGATTCTCCTGGCTTGAATGGGAAAGGTACGGATGAAAATGAGAATAGCAACAAAATTGAGACAGTAGCAGAGGTAGAGCATAAGCATCGGAAGAG GACTGGTGGTCTTGGAGATGTATACCAGGATAAGTGTACAGAGAGCAGTAGCAAGATTCTATGGGATGATAATGCGATTTTAAAATTGCTCGATCGTTCA AATATTCAAGATGTTTCAGCTGATAATGCTGAAGGGGATTTTGAGAATGATATGCTGGGCTCAGTGAAGGCCCTTGAGTGGAATGAGGAATCAACTGAAG AGCATGAAATGGGTGAGTCTCCTCCTAATGGGACTGATGATATGTGTACACAGAATTCTGATAATAAAGAGGATAACGTTGTGGTTAGCAACGAAGAAAA TGAATGGGACACACTACTGCGCTTGAGGTGGGAGAAATATCAAAGAGATGAGGAAGCAGCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTATTTCTTAT CGGGAAGTATGTGCTGCTCACCCTGGTGAAACAACGAGTGAGTGTGGCGGGGACGAGGAAAAAGTGCCAGAACCAGAGCCTGAGCGTGAATATACGCCAG CAGGAAGGGCCCTGAAGGCGAAATAGTATGACTTAGCTTTTGAATCTGATTTACATTACAGCTCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81925; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_39246
| Blastp | Protein CHROMATIN REMODELING 4 from Arabidopsis with 63.9% of identity |
|---|---|
| Blastx | Protein CHROMATIN REMODELING 4 from Arabidopsis with 63.9% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT5G44800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447906.1) |
| Pfam | PHD-finger (PF00628.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |