Id Trinity | FTRINITY_DN59013_c0_g2_i5 |
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Name Transcript | Ll_transcript_145437 |
Sequence | ATCACGATTGTAGTAGCAGATTTTCCCCCGGTATAACTGAGAGTACTATTTTATCTTACATAAGTAATGAATTAATTTTTTTCTAGAGTATATGGTTGTT CTCCGACAAATTTTGCTAATAAAATCTTTCACTTTTTTTGTCTCTAGTGAAGTCTTATACTACTATGTCAATGTTGATCGTACAAAACATTATTAAAAGA ACCTTTGATAATCATTGACCATAGTGGATTGTTTCCACATAAAGGGGTCACTGCCATTCTAGTTAAGTGCTGGCTGCATTAGCAATCTCATTAGAAGTAG AAAAATATACACAACAGTTGTGTTTAGTAGTCTTTGTCTTTTTCATTTCATGCATCCCCCCAAAATCTGTAACAATCATTGGCAAAGCTTAAGCTCTTTT CATCAATCACAATAATGGAGTTAACACCAAAGTTAACTCCAAGAGGAAGAACTCAAGGCCATGTTTTGACCTTTGATAGAGATGCAGATTCATTTGTGGA TGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCAATTGAGAAATTACCAACTTTCAAAAGGATTAAGACTTCTTTTGTTGATGTTAGGCAAGATGGTGAA GAGGGTGGAAGCACTAGCAAAGAAGCAGATGGAAAAAGGGTTGTTGATGTTACCAAACTTGGAGCTGTGGAAAAGCGTTTGTTTATTGATAAGCTCATCA AACACATTCAGAATGATAACCTTCAGTTGCTGCAAAAACTCAGGGAAAGGATGGAAAGAGTCAATGTGAAGTTACCTACTGTGGAGGTTAAGTACAAGAA CCTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTGCCTACTCTATGGAACTCTTTTACTACCTCGTTTTCGGGTTTTGTGAAGACTATA TCATGTAATACACAAGAAGCCAATGCAAGCATTCTGAAAGATGTCAGTGGCATCATAAAACCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTG GGAAAACAACCTTCTTAATGGCACTGGCTGGAAAACTAGATCAACCTCTCAAGGTTTCTGGAGAAATATCTTACAATGGTTACAAACTAGATGAATTTGT TCCTCAAAAATCATCAGCCTATATAAGCCAGTATGACCTGCATGTTCCTGAGATGACAGTAAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGGGTT GGAAGTAGAGCCGATATAATGGCTGAAATCACCAGGAAAGAAAAAGAAGCAGGAATCATCCCAGACCCAGATATTGACACCTATATGAAGGCAATTTCAG TTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTCGATATGTGTGCTGACACACTGGTTGGTGATGCATTAGAAATAGG CATTTCAGGTGGACAAAAGAAAAGATTGACTACAGGAGAGATGATTGTTGGTCCCATTAAAGCTCTTTTCATGGATGAAATATCCACTGGCTTGGACAGC TCCACAACCTTTCAAATAGTTACCTGTCTCCAGCAATTGGCGCATATAACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCGGCTCCAGAAACCTTCG AATTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCACTCCAATTTTTTAATGATTGTGGTTTCTGGTG CCCAGAAAGAAAAGGAGTAGCAGATTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGCCAATACTGGTACCGGATGGATGTTCCTTACAACTATGTT TCAGTGGATCAGTTCTCAGAGATCTTCAAAGAAAGTTATTGGGGTAGAATGTTAGATGATGAGGTCTCACAGCCATCTGATAAATCTCAATCCCATAAAA ATGCTTTATCATTTAGCAAGTATTCCTTGGGAAAATGGGATTTGTTTAATGCTTGTATGAGGAGGGAGATTCTTCTCATGAAGCGAAACTCGTTTATATA TGTTTTCAAAACTGTACAGCTCACAATCACTGCAATCATAACAATGACGGTCTTCATACGCACTCAACTGGCTGTGGACATGATAAGTGCAAACTATTTG TTAGGTTCATTGTATTATACGCTTGTTCGCCTCATGACTAATGGAATTGCTGAGCTGATCATGACTATTACAAGACTTCCGGTTGTTGATAAGCAGAAAA CATTCTATCTTTATCCAGCATGGGCTTATTGTCTTCCAGCTTCCATTCTAAAGATTCCATTCTCAGTTCTTGATAGTATTGTGTGGACATCAGTAACATA TTATGTTATAGGCTACAGCCCTGAAGCATCAAGGTTCTTCCGCCAGTTCCTTTTGCTTGTTGTTTTGCATATGTCATCAACCTCCATGTGTCGTTGTCTT GCCTCCGTTTTCAAAACTGATCTTATGGCTTCAAATGTTGGTTCGTTGGTGTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCAC TACCATCATGGTTGAGGTGGGGTTTTTGGCTTTCTCCTATGTCATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGCTCCTCGTTGGCAAAAGGT ATGTACCAAGATAATTTATTTGGCTTCATGATAGGTCACAACAATATGTATATATATCTACAGCTTTTATTATTTGCAGATCCAAGAGGGAGGCATCACT GTTGGAAGGAAGGTTTTAATTAGTCATGGTTTAGACTTCCATGCCAACTTCTACTGGATATCTGTTGGAGCCTTACTTGGTTTCACAGTACTTTTTGATT TTGGATTTATCTTAGCATTAACTTACATAAATCAGCCGAAGATGTCTCGAGCTTTAGTTTCAAAAAAGAGGCTCTCTCGGCTGAAGGGAGGAGAAAAAGA CAACAATGTGGAACTAAAATCAATTACAGTTGATATCAAGAGCACACCAAGGGGAACTCAAAGTACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGACA GTAGCGTTCAAGGATGTCCAGTACTTTGTTGACACCCCTCCGGAGATGAGAAAACACGGTTCAAATGAGAAAAAACTACAATTGCTCCGAGATGTCACAG GAGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTGAGTGGAGCAGGGAAGACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTAT CATCGAAGGGGATATAAGAATTGCAGGATACCCAAAAGTGCAGAAGACATTTGAAAGAGTTTCTGGTTACTGTGAGCAGAATGACATACATTCTCCATAT ATAACAGTTGAAGAATCTGTCACATACTCAGCTTGGCTGCGGTTGCCAAGGGAGATTGATTCGGTCACAAAAGGGAAATTTGTGGAGGAAGTCCTTGAAA CAATTGAGCTTGATGATATAAAGGATTGCCTAGTTGGGATCCCTGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTTACCATTGCAGTAGAGCT TGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGCTTGGATGCACGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGGC ACTGGCAGGACCACAGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGACAGATAATTT ACAGTGGTACACTAGGCTATCAATCAAGCAAACTGATAGAATATTTTCAGAGTATACCTGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACTTG GATGTTGGAAGCTACCTCTGCATCTATAGAAGAAGAACTTAAAGTAGATTTTGCAAAAATCTATCAGGAGTCAAATCTTTACCAGGAAACCCTTGAATTG GTGAAAGAATTAAGCCAACCATGGCCAGGTTCAAGCGACTTACACTTTTCAACCCGATTCTCACAGAATATCGTGGGGCAGTTTATGGCATGCCTATGGA AGCAACACTTGTCCTATTGGAGAAGTCCTGAATATAACTTATCACGTTTCATATACATGGTTGCTGCAGCAGTAATATTTAGTGCGGTATTTTGGCAGAA AGGGGATAAAATAAACAACCAACAGGATTTGTTCAATGTACTTGGATCATTGTACATTGCTGTAATATTCCTGGGTATAAATTACTGTTCAACAATTCTA CCATACGTGTCAACCGAACGCAGTGTCTTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTATTCATTTGCACAGGTGGCTATTGAAATAC CATATATCTTATTGCAATCAATTCTGTATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTGAGAAAGTGTTTTGGTACTTCTACTCCAC ATTCTGTACATTTTTGTACTTCGTATATCTTGGAATGCTGATAATGTCATTGAGCATAAATCTGGATATAGCTGCTGTATTGTCAACTGCAGTCTACACA ATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATAACCCCCACAGCTTGGTCACTGAATG GACTCCTAACTTCACAATATGGAGACCTGGATAAGGAAATACTCATATTTGGGGAGAAAAAACAAGTTGGTTCTTTCCTAAGAGATTACTATGGTTTCAG ACATGACAGATTAAGCATTGTGGCTGTGGTGCTCATTGCTTACCCCATTGTTTATGCATCTCTCTTTGCCTATTGCATAGGAAAAATGAATTTCCAAAAG AGATAGAGACTTACAGATTCCTTCTTCTTCTGCAGTATGGCTGCTACAGTTTTCATGTATATAGAAATACATTGCTATATCAATGAGCAAGATCTCTCTT ATAAGATTTATATATTTTTGTTTTAAAAGTTGTTTTCTTCCTTCTATTGATTTATTTTTACATATAAGCTAGTTATATAATGATGAAGAATATATCCAAT CTGTACAAGTTGAGAACAATAAAAATGAGACTATTTTTGTTTGTAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_82088; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_145437
Blastp | Pleiotropic drug resistance protein 3 from Nicotiana with 65.2% of identity |
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Blastx | Pleiotropic drug resistance protein 3 from Nicotiana with 62.89% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107764055) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463336.1) |
Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |