| Id Trinity | FTRINITY_DN59014_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_146587 |
| Sequence | TAACGTTGTGAACTGATTTGACCAAACTAATAATTCATCATAATGAGGAAATTTTCCAATCAAACTAAAAACCTTATTTATTTTATAAATTTGTATTTAC ATTTGAAGTCGAGTAAATGACAAGCCCAATCCAATCAATCATTTGGGAATTGAGAAGAGAAAGAAAAAGGGAAGAGAGAAAGAGAGAAGAAAAAAGAAAC TACACAAAAACGGAGAAGTTGAGTGTAACAGTGAACATCGATGGATGAGAGAGTAATAGAAACCGAAACCGAACTATTTATGTTTGGCTTCGACGGTGTT TTATTCCGGTGATCGGAAATGTTGATTTTCCGGCAACTGTTGTCGGTGGGAGTTGACTGAAGAATAATCAATACAGTGATGAAGAAAGGGAAAAGTAAAA ACAACGGTTTATTGCCAAGTTCGTTGAGGATTATCTCTTCATGCATCAAAACCGTTTCCACCAATGTCTCCACCGTCGCCTCCTCCGTTCGCTCCTCCGC CGCTTCCATTACCTCTGCTCCCGATGATCACAAAGACCAGGTTACCTGGGCTGCTTTCGATATACTAGAGCTTCATCAGTCTAACTTTAAACGTATTCTT TTACTTGGTTATCTCAACGGATTTCAAGTTCTTGATGTCCACGATGCTTCTAGCTTTATTGAGCTGGTTTCGAAGCGTGATGGTCCGGTTTATTTCTTAC AGATGCAGCCTTTTCCTGTATGCTCTGATGGCCAGGAAGGGTTCATAAAATCCCATCCTTTACTGCTGGTTGTTGCCGGGGATGATACCGGCATTATTAA TCACAAAGGTACCCATTCCAGTGCTTTAGGAAGGGGTGGTAAGGTGGAAAATCAGTCTGGGAACAGTGTCAACTCTGCTACAGCTGTTCGGTTTTACTCA TTGAAGTCTCACAGTTATGTTCATGTTCTGAGATTTCGGTCTGCGGTGTGTATGATCAGATGCAGTTCACAGATTGTAGCTGTTGCTCTTGCCACACAAA TATACTGCTTTGATGCGTTAACTCTTGAGAATAAATTCAGTGTTCTCACCAACCCTGTTCCTCAGTTAGCAGTCCAAGGATCATTAGGTGTTAATGTGGG TTATGGTCCTATGGCTGTGGGTCCAAGGTGGCTAGCATATGCTTCCAACAATCCACTGCCCTCAAACGTAGGATGCATGAGCCCACAAAACCTAAGTCCT TCGCCAGGAGTTAGTCCATCTACATCTCCAGGCAGTGGTAGTTTGGTGGCTCGTTATGCAATGGAGTCCAGTAAAAGTTTGGCTGCTGGGATAATCAAAT ACTGTCATGAGCTACTCCCTGATGGTTCTAATTCTCCAGTACCATCAAATTTGGGTTGGAAAGTTGGGAGGGTTACAGGAGCTGATAAGGATAATGCAGG AATGGTAGTTGTTAAGGATTTTGTTTCCAAAGCAATCATCTCACAATTTAAAGCTCATTCTGGTCCTATATCCGCCCTATGTTTTGACCCTAGTGGGACC CTTCTGGTCACTGCATCAGTCTATGGGAATAACATTAACATCTTTCGGATAATGCCATCATGCACACGCAAGGGTTCAGGGGTTCCAGGCTATGACTGGA CCTCTTCTCATGTGCATCTTTATAGGCTTCATCGTGGAATAACACCCGCAGTTAGTATATCTTAGTTGTAATATGCATATTATATTTGCTTTGAAGTTTG ATTTTCTTTTATAGCCTGCTTTTATGCCTTTTTAATCTTCTTATTTTCTTATCTGACAGATGATCCAGGACATTTGTTTCAGTCAGTTCAGTCAATGGAT TGCAATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCACCTTTTGGAGGTGATACTGGTTTCAAAATCATTAATTCTCAGGGTGAAGAACCC TCCTTACTTCCGGTTTTTCCTCTACCTTGGTGGTTTATGTCATCTTCCACTTCTTATGAGCATCCTTCGCCTCCTCCAGCACCTAGTGTCCTTTCTGTGG TTAGTCGGATAAAATATAGCAGTTTTGGATGGCTTAATACTGTTCATAGTTCTACTTCGAATGTCACAGGAAAAGTTTTTGTTCCTTCTGGTGCTATTGC AGCTGTTTTTCATAATTCTTTATCTCACTCAAAGCAGCTTGGTAACTCAAAAGTGAAACCATTAGAGCATCTGATGGTATATACACCGTCAGGTCATGTA GTTCAACATCAACTTCTGCCATCTGTTGGTCCAGAACCAAGTGAATGTGGTTTGAGAACCCAGTCAGCTTCAAACCTGCATATGCAAGAGGATGAATTCA GAGTAAAAGTTGAACCAATTCAGTGGTGGGATGTATGCAGAAGGTCAGAATGGCCAGAAAAATGGGATCCTTGTGGCAATACTGTTGATAGACAAGATGG TATTGTTCAAGAGAAAATGTGTTCTGCTGATGGCTATGGATTGGATTTTTGGGATATAAGTCGTGGTGTTGGGGAAAAAGTGGTAAAGCATTCTACAGGG AAGCCTCAAGATAGATTTCATGGGTATCTATCTAATGCAGAGGTGCAAGTGAATTTTGGAAGGCTGCAAATATGGCAAAAGCCTAAGATTTACTTCTATG CAATGAATTCTGTGAGAACTGGTTTTAGTGATGGTGGAGAGTTTGAAATCGAAAAGATCTCTGCTAATAAAGTTGAAATAAGACAGAAGGAGTTGTTGCC TGTCTTTGACCATTTTCATAGCATCAGACCAAGCTGGAATGACAGGTAGTGTCTGTTTTTCTTTTTTACCCCTGGCGGATTTGGTTATCTATCTAGCACG TCATTACTTTGTCAATCCATGTTATGCTTTCTGATGAAGACTACTTTTAGATTATTAATATTTATTGTGACAATGGTATATGATAAAAAGAAAATGGGAT TCACCAAATATTAAAGAAACAACACAATGGTTTTTTTATCATTAGACACTTTGGACTTTCCCAAATTTGTGTCTTAAGGGAGTATTGACTTCATTTGGCT GGTTACCTTGCGGGCACTTGCTATTGTTTGATGTTGAATGTGTATCTTATTTTAATGGGATTGCAATTTATATGTTTACAATTGCAAACTTGATATTGCA TCATCCCCAACTGACTTACTGTATCATGTTGTAGATGAACTGGTTTCATGTATTGTCTCACCTAAAATCATGCCTGCTAGCTGCACCTCAATCACCCCTT TTGGGAAAACAAAGAAAAAATAAACATCATTATTATCAATTTTTTCACCTGGTCTAGATTACACGTGGTCATCCATCTTTTAAGCACCTTCTGTATGCAT TCAGTGTATGTGTAATTGTGTATGAACTAGGTAGATATCATGCCTAGCAAATTGCATGTATTATCATCAGTGAAATGACATCTATGTTGTTTTTTGGTTT GTCTGTGATTCTCTATAGTCTTTTATTTCATCACATGCTTACTTGGTTGTTTGACTTAAGAGACCATGCTGGGGAAAAATATTTGAACCTTGCATCTCCG GTTTCCTATCAAGCTGAAGGCAGGCAAACTGCTGACATGACAGTTATTTGTCACTCAAAGCCAGCATCCCTGAGTTCCACTGAAAGCTCTGATGGAGGTA AGAGAGTAACTTTTAACTTCCGTGGAGCAAACATAACAACAATTATTGAAGACCCATCAGAATTTATACAAGAGTGTGGATGTATTTGTGAAAATGCAAT TTACATTTATTTGAATCTCCATGTGATGGCCTACCCTTAGATTTGATGTCTGTAATTAACTTTAGGTTCATCAAGAAGGATCGAAAATTTGATTGACCTG GATCAAATTTCTCCTACTTGTCAAGTATTTGGTGAGATCTACCTAGAAAGAATGGGGGCAATCAATGTTGAACCTTCGCTGCAAAACAAGGCTGTGCTGG AAAATTTATCTCTATCTGGGAACCTGAAACATGAGGATTCTCAATATGACTATTGTCTTGATAACAGACCATTATTGCAAGGGAGCAAGATAACTTATTT AAAGGGAGATACTTCAGAAGATGTTGGTATCAGTGAGGCCTCAACATTTGTCCTGAAACATGCTTCAGATAAGAGTGAGCCTATAGAAGTGATCCCAGTA ATGCAAAATGCATGTGATAGTCAATCATTTCCGGATAGGCAGTGCAAAACACCGAGGCACAAGGGAGGTAACGTGTTAACTGAAGTAGTAGCTGATGATG TTGACAGCAGCAGTAGCCACCATGAAATAGAGCAACCAGAGGAGGACGGGGAGAATGATGAATTCCTTGGTGGCTTGTTCGCCTTTTCTGAATAAGGAGT AAAGAGCAGGTGACAGCATCAATGAAGGTGTGTGATCATCTTTGGTAGCTGGAGTCTCAGTTAGGAATATGTACAAAGCAATATGTGAATAAGAAATGAT AAAAGAGCAACATATTAGGCTGATTTGTTGCTATATCATGTGACCTCTCTCTCTCTCTCACTTTTGTACATTTTGTAAATAGGAAATCATATTCTATTCA CGGGTTTGCTTACATTGGGGCTTATCATCTATATGTTGGGTTTGGATTCCTCCTAAGCTCATTTTTTTAATCAATCTTGCATCTTAATTGTGGATTGGGT ATGGCATGGTATTTGTGTAATGCATATTTTTTAACACTTGAATTTGGCAAGGAAAATATGAATGGAAGTTGTAAAAGGTCAGTTAAATTTTCATCATGTT TTACTTCAATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_82090; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146587
| Blastp | Autophagy-related protein 18g from Arabidopsis with 54.22% of identity |
|---|---|
| Blastx | Autophagy-related protein 18g from Arabidopsis with 62.67% of identity |
| Eggnog | Breast carcinoma amplified sequence(ENOG410XSW7) |
| Kegg | Link to kegg annotations (AT1G03380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441802.1) |
| Pfam | Breast carcinoma amplified sequence 3 (PF12490.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |