Id Trinity | FTRINITY_DN59018_c2_g1_i21 |
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Name Transcript | Ll_transcript_146722 |
Sequence | AAAATAAGTTAGGTGCCATAAGTGGCTTAAAAAAAGTTAAGCTGTTTTGGTGAGAGATTCTTAAAATAAGAACAAGAAGATATATGAATATATGATTATG AACCAACCAACAAAGAAGACTGAAACGACACCGTTGAATCAACAACAACAACTTTAGAAGTAAAACCTATTCTCTCACACACACACTCTCTCTCTAAAAC CATGCTTTCTCACTCATCAGTGTGATTATTACTACTACAGTTACAGATCGAGTTTGAGTTTGAGTTTGTGGCTGTGGATTTTTTTTTTGGAGTTTCAATT GAATGGCTTCAATTACTTCGTCGAAGTTGTTGTGCTTCAATCCTGAGTGCAAAGAATTCAAATCTGAAAGACCTAAGAAAGGTTGGAGACTACGTACTGG TGACCTAGCTGAGCTTTGTGATCGATGCGGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTTTCACTCAAATGCTTCTGGTTGGAGGAATTGTGAG ACTTGTAGGAAGGGGATTCATTGTGGATGTATTGTTTCAAGTCATGCCTTCGTCTTGTTGGATCATGGGGGAATTGAGTGCTTTGCCTGTGCCCGCAATC ATATTCTTTTGCAGTCTAACCCAAAGTGGCCATCATCTTTTTCCCTTCAAAATCGTTTATCTGAGAGACTTAGAGACCTGCCTACACAAAATTGGAGTCA ATTAGCTGGATCAGGGCATATATCATGGAAGCAAGCACCCAATCTGTTCAGTTCTGTTTCTTCATCCGACCTGCATCCAGATGTGTCCCCTCATGAAAGG TTACCTGCCTCTTCTTTGGAGAATAAAAATGAGGATTTGTGTGGAATATCAGTTAATTGGAGCACTAATTTTGGTCCACAGGAAATGAAGCTTATGAATG GATTTAGGAATGGAGACAAATCAAGTTCATGTTTAAATATTTGGCAACGGCCTCTTTTTCTGAAGGAAGATTCGTCCCCGCAACCATTTGCTCTGTCTGT ACCTTACGCGACTCCAAGTGAAAGAAATGGTCAAATTGCGGTAGGTGGAAGTCATCCACAACAAACTACACCTCTTCCAGGAAAGCAATTTAGTGACACT GTGCATTTAGCCCTGGATTCATCAGGTGAAGCTCAGGTTCGCAATGGACGACCTCGAGCAGATTCCCGAGGAAGAAACCAGTTACTGCCTCGGTACTGGC CAAGGTGTACTGATCTGGAGCTACAGAAAATAACCATAGACTCTACTTCTGTAATTACTCCCTTGTTTCAGAAGACCTTGAGTGCTAGTGATGCTGGGCG AATTGGGCGTCTAGTGCTTCCAAAAAAGTGTGCTGAGGCCTACTTCCCACCAATTTCCAACCCTGAAGGGTTGCCACTTAAAATCCTTGATGCTAAAGGA AAAGAATGGATATTTCAGTTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTGTTAGAGGGTGTCACTCCCTGCATACAATCCATGCAGTTGCAAG CAGGTGATACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTACGCCGTCCCACCAGGACAATGA AACAAACAAGACTGGAAATGAATTTTCTGCACAGGGTGAGGTCGAACTGGCTGATCCTAGTTCATGGTCTAAGGTTGATAAGTCAGGATACAAAGCAAAA GAAATACTGGGTAGCAAATCTTCAATTAGAAAGAGGAAAAGCTGCATCTCAGGTTCAAAGAATAAACGCCTGATGATCGAAAATGAGGATCTAATAGAGC TGAAAATTACATGGCAAGAAGCTCAAGTCCTGCTCCGTCCTCCTCCTAGCCATGTTGCTAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGA GGTACCTTGCCTCTTGCTTGACTTCAGAAATGGTGTAGTAGTACTACTGTTTTATGTTTTTAGTTTTCTAATATTCTAAAGCTATCATTAAACTTGCTTT CTACATGACGGAAATATGTGCCGTGTCTTATTTCGGGTAATGAACAGTGCTTGAATAAATAACAAAAGTGGCAGAATTTTTATGACTAAAAACACTGGCA GACATTTCTGGTAGCAGACTAGCAGCATTGTCTACTGGTCCTGCACAGAACTATGGAAGTTGTCAGAACATGTGAGGCATTGTCATGAAAGTATTTATAA TTCTAATTATTATTGAGGAGAATCTAGAACCACGATCCTAAACTATGGTTATGTGAACATCTTACTATCTTAGAGCATATGAGGACAATCTGAACCTTTC TTAAGTCATATAAAACTAACCAAATGATACTTCTGATTTATCCATGATGCAGGTTCAGTGTGTAGTCTTAGTTGTATATAATCAATCCAATATGTAGTTA TGAGACTCATGTGTAGAGTTACAAATGTTCGAAAGTCCAAGGTTGAGTATACAAAGAAAGAAGGGGAGGGGAAGATAGTTAATGTGTGCATTTGGTTACC ATGTAGGATCCTCAACTGGTCTTAATTGAACTGTACATTATGTGACCTTTTGATTTTTTTTCATAATTCATTGTGTATATCAGTATATGCTTATCTTCAA ATTCTGAAGCCTTTCTCCTTCCCTGTCCTCCTGTTGCCCTTGAACTGAAAAACATTTTTGGATTAAAATATTGAACTCTCTAAACATGTACTTCCTATGT TGGATTGGATTTATAGCATCTACCTTTGTTGTCATCTCACTGCCTTTATTCTTTTGAATGAGATTTCGGAATTGCTATGCATTATGGAAGCTTTATGCTG AGAATGCTTTTACAGGATGCTCCAGTACTCGGGAAGCCAACAATTTTCACCACTGGTAATATGGGTGAAAAGGTCCAGTGGGCTCAATGTGAAAATTGTC TTAAGTGGCGCAAATTGCCAGCAAGTGCGCTTCTTCCATCAAAATGGACGTGTTCTGATAATTCATGGGACCCAGAAAGATCTTCTTGTTCGGCTGCACA AGAGCTAACAGCAGAGCAGCTGGAGAATATGCTACCCCCTTGTAGTTCAGCTGTTTCCAAGAAAATGAAGGCAGCCAAGCAGGATCCTGATAATGCTGAA GCTTTGGAGGGACTTGACACACTTGCAAATCTAGCTATCCTGGGAGAGGGTGAGGCGCTTCCCTCATCTTCCCAGGCCACAACTAAACACCCACGGCATA GACCGGGCTGCTCTTGCATTGTTTGCATCCAGCCTCCGAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCG CCGTTTCCGTACCCTAATGTTACGCCGTGAGAAGAAACAATCGGAAAAAGAAGCAGAGACAACGCATAAAAAGCAGAAGCACAAGCATCCTCAGCCATTA CCTCCATCTGAAATTTTGCTTGATGATGATTCCTTGCCTTGTAGTAACACAGGTGATAGCAGCAGCCCAAACCAGAACAAAGAGGGCAATGACGGTTCTG ATGATGATCCTATCCAGATAAAATCGTCTGCTTCACCATTCAAAGGCCAAATTGACCTCAACATCCGGCCAGAGAGGGAAGAAGAGTTTTCACCTCGTTC AGATTCCAGTGGTATGATGAAGTTGCCCCATGATACTACTGATATGTATCTCAAACAGCAGACGACTATGTTGAACTCTAGTATGGGAGACGCATCAGGA AGTCAGTCACAGAAGGTTGGAGATGGAGTGAGGGATGAGAAACTTAGCAATGGTGTATCCCATGGCAATAGTAGTGATAATAATGGTGATAAGGAACATG CCCAAGCTTTGCCTATGAATGTGTGAAAATCATATTTGAAGCTATAGCTTTAATTATAACTCATTCTTGCAAGCTATATTGGACTGGAGAAAGTATTTTT ATTGTACATTAATTCTTGCCTTTTCAGATTTGTATATAAAGAGGGGTAGTAAAGAAGGCAATTCATGAAAAGACCAATATATTGTGGCAATATCAGTGAA CATGATAGTGGTTTGTGTAGGAAAAATTATGAAATGCAGTTGAGGATAGTGCTATTAGTACTCCAAAGTGTCTATTGATATTTTCCATTCACCAATCAAA ATTGTAGTTTTTTATTTTGCATGTTTCTTTTAAGTGGAAGCACAATTTTGCATGTTTCCAGCAGACAACCTTTGATATGCAAACAATGATGGATATAATG TTTTTTTTGTTTGTTTTTTGGGTTGGATAGCACGAGTGCATTTGCTGTGCCACACTTGGTGTCACGTTATGTGTCATGGAGAAAAACTTACATGAATACG TATATAACACGTCATATTTAGâBLAST |
Tissue | flowers |
Gene name | LI_gene_82125; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146722
Blastp | B3 domain-containing transcription repressor VAL2 from Arabidopsis with 43.7% of identity |
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Blastx | B3 domain-containing protein Os07g0563300 from Oryza sativa with 42.12% of identity |
Eggnog | B3 domain-containing protein(ENOG410Z235) |
Kegg | Link to kegg annotations (AT4G32010) |
CantataDB | Link to cantataDB annotations (CNT0000445) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440292.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |