| Id Trinity | FTRINITY_DN59024_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_147438 |
| Sequence | TTTTTTTTTTTTTTTTTTTTTTTAGTATAAATTTTGTGCAGTTAAATACATTACAATCAATCTAGTTTATTATATTTTATTGTATTTTGTGTGAACCTTG GAACATTATCTCTTGAACACAAGATTTTTGTTAGTTTTCAGTCTTTGCCACATTCTTTATAAGGCCACAGAAATTACAGATAAACTATGATACTTCACAT TTTCAATTATCTCTTCTAAAAAAATCTGACTTTTAGAGTTTACTTTCACTTCAAGAAACACTCTTTTATTGCTTTTCCTTTTGATATTGTGAAAAAATGA TTCTTTCACTTTATGCAGGATTTGATGAATTTTGGCTAGTCTGGTTGCTCTTTTTATGAATCATTACATGGTGTTATCTGTAGGCAGTAGAAAACTCGAA TGGAGAATCTGAAAATACCTGCTAATTCTGATCCTGATGCCAGCAGCGACCCGTCAGATTCATTTCGTGTATTTGAACCACCGACGAGTCAAGCTGTTGG ACAGCCGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCTGTAAGACTCGATGGACGTTCGGTAAATGCTTCGTCTAATTCTGCAGGCAGCAGGGGGGAA TCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCCGAATTCGATGATAGCAACTCTAAATTGTTTATTTCCGGGGATAAAAATATAATGAAAGACAAAA ACTTGAGGACTAATCAGAATGGGAATTCATCTTCTGATCATAAACAAGTTTTAACTGAAGCAAGCATAGCCGAGAGAACTGCCGAGTGGGGTCTTGTCGC AAACTTGGATAGTTTTAAGACCTCTTTCGATGGTGACAGGATCAAAAAGCTATCCGATAGATTCGTTGAATCAACTAGGACATCCGGGGAATCGAGTTAT GGGTCCGAGTCATCATCAGGGTTGATCCCGAGGGTCTCACAAGAGTTGAAAGAAGCATTGGAGACACTACAACAGACATTTGTTGTCTCGGATGCAACAA AGCCAGATTGTCCAATCATGTATGCCAGCACCGGCTTTTTTAGCATGACCGGTTACTCTTCAAAGGAGATTATTGGAAGGAACTGCCGATTTCTTCAGGG GCCTGATACCGACAAGAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAATGGGAAAACATATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACT CCCTTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACAATGGCAATACAATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAG GTTTGAATGAAAATGCGTTACGACCAAATGGATTGCCGAAGTCATTAATTCGTTACGATGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGT AGTCCAAACTGTTAAGGATCCAAAATCCATTATCCGGGCTAGGACTGATGATACTGCTACCAAGAACGACGAGCAAGAGAAGCCTAATTTTGATCTTGTT TCGCCGAAGTCTGTTGAAACCGGGCATACAAGTTTACCAGGTAGACAACCTTCTCCACTTAACATCCAAAGTGATATATCTCGTGCGAGTTCTACTCAGG ATAGGAAGAGCAAGTCATCAAGAATATCAGGCCGAACTCCTTCGCTGAGTTTCAAAGGGAAATCTATGAGTTCTGTTAGGGGAGAGGAGGAAAAGCCAAT TGTCGAACCGGAGGTTTTGATGACTAAGGAAATAGAGCGGTCCGACAGTTGGGAGCGTTCTCAAAGAGAAAGGGATATAAGGCAGGGAATCGATTTAGCA ACCACGTTGGAGCGCATAGAGAAGAATTTTGTGATTTCTGATCCTAGACTTCCGGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTCACAG AGTATACGCGAGAAGAAATTTTGGGCCGAAACTGTCGGTTTCTTCAAGGACCGGAAACCGATATGTCGACTGTGGATAAGATTAGAGATGCTATCAAAGA GCAAAGGGAGATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTTTGGAATATGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAA CTTCAATACTTCATTGGTGTTCAATTAGACGGAAGTGATCACGTAGAACCCTTACAAAATCGTCTGTCCGAGAGAGCCGAGCTACAAAGTTCTAAGTTGG TTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATT CCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGAGACAAAAAGATTGAGTTGCATAATTTTGTGCCCATAAGG CCATTGGGTTGTGGAGATACTGGAAGTGTTCATCTGGTGGAACTCCAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAA ATCGTAATAAGGTTCACCGTGCATGCATTGAGAGAGAGATCATATCATTACTTGATCATCCTTTTCTTCCAACACTATACACTTCATTTCAGACTTCTAC ACATGTATGTTTGATTACTGACTTCTGCCAAGGTGGAGAGTTATTTGCCTTGCTTGACAAGCAACCCATGAAATTGTTTAATGAAGAATCCACCAGGTAT TTATGCTTTTCCATTTTTTAAGCCTTGTGATTACTTCAATTTTTCTGTATTTATGTACATGATTCTTCTGAAAAATCTTTACACTAGAAGTATATCAAAT TAAGTCCTTACTGAAATAGATTTTTACGGTAAGCCTCGACGCAACAGTAAAGATGTTGCTTAGTGACCAAAAAGGTTACGAGTTCAAATCCTATAAACAA CCTCTCCGCTTGTAATCTCACTAGATGGGAGTCTCGCATACTCAGCCACCCTTTTGATTTTTAACATAGATTTTTATATGTATTATACTTATTAATTTAT ACTATGTTAACTTTGATCACATCTCTAGATTCTATGCAGCAGAGGTTGTCCTTGGTTTGGAATATCTCCACTGTTTAGGTACACTGTTCATTATATCCTC ATGTTATTAGTTCATTGTACTTGCTTAGGCAATTTCATGCTTATATATCCTCAATCTATTTTTTCACAACATCAATAGGTTATGGTTCTTAAGTTGTCAA AATATATTTTTCTTTTACCGGATCGGTATAGGTATAATTTATCGAGACTTGAAGCCGGAAAATATCTTACTTCAGAAAGATGGGCATGTTGTATTGACTG ATTTTGATCTATCATTCATGACATCTTGTAAACCCCAGGTATGCATTTCTTTTCCTGTATAAACTAGTCCACTTATATAAATCATTGGAAATTCTTGGCA CTGATCTAGTTTTGGTAAAAAAAAAGTATCAGTTATCCAAATCACTCTCTCTTTCTCCCATTAAAATCCATAATCTTTTGTAAAACAACTTTTCTTAACT ATCACTACATGAAAATTGAATGCATTGCCATGTTTTTTCCATATAGCTTGAAAACATTGTTCTATTTTCCCATCCTACATAATGTGGCTTGCATCTGCTT GATAATTGTCTAATGCTAAAGTTGGAATTTATGCATGCAGGTTGTGAAACAGCGACTACCTAGTAATAGACGAAAATCTCGGAGTCAACCTCTACCAACC TTAGTTGCAGAGCCAGTTGCGCAATCAAACTCATTTGTCGGAACTGAAGAATACATAGCTCCTGAAATTATAACTGGAGCTGGGCATACTAGTGCTATAG ATTGGTGGACCCTCGGTATCTTGCTGTATGAGATGCTCTATGGTCGTACACCGTTTCGAGGAAAGAATCGACAGAAGACATTTTCCAACATCTTACACAA GGATCTTACCTTTCCGAGCAGTATCCCGGCAAGTCTGCAAGCCAGGCAATTGATTAATGCACTATTGCAAAGAGACCCGGGCAGTCGTCTAGGTTCAAAT ACTGGCTCCAACGAAATCAAACAACATCCGTTTTTTCGCGGAATCAATTGGCCTTTAATCCGCAACGTGAGTCCACCCCCATTAGAAGTTACTCTTGAAT T BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82168; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_147438
| Blastp | Phototropin-2 from Arabidopsis with 69.72% of identity |
|---|---|
| Blastx | Phototropin-2 from Arabidopsis with 68.54% of identity |
| Eggnog | Histidine kinase(COG2202) |
| Kegg | Link to kegg annotations (AT5G58140) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446967.1) |
| Pfam | PAS fold (PF00989.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |