| Id Trinity | FTRINITY_DN59024_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_147452 |
| Sequence | GACTCATGTTAGTTTTGAGGCTTTGTCACTTTCTTTATAAGGCCAAGCAGAACAGATAAACCATTAGAGTGTTCAACTTTGAATTATCTTTTCTTGAAAA CTTTTATTGCTTTCCCTCTTGATTTTGTGAATAAAAGGGAATCTTTCACTTTCTGCATGATTTGATTTGATGAACTCTGTGTAGTTTAATTGCTCTTATT TCATGAATCATTACATGGTGCTACCCTTTAGTCTGTAGGAAGTGGAAAATCAAATGGAGAAACTGAACTTATCTGCTAATTATGATCTTGATGCCAGTAT CGACCGGTCGGGTTCATTTCGTGTATTTGAACCGACGGAGAGTCGAGATGTTGGACAGGCAAGTAGTAGAAGGGAGCAGAATGATACAGAAGATGTGAGA CTTGATGGACAATTGATAAGTGATTCCTCTAATTCTGCAAGTAGGAGAGGGGAATCTGTGAACAAGTGGATGGCATTTGCTACGGAGCCCGGAATCGATG ACGGAAACTCTTCAATGAAGTTTGTTTCTGGGGATAACAACTTGAAGACTAATCAAAATGGGAAGTCAACTTCCGGTCATCATCAAATTTTAACTGAAGC AAGCATAGATGAGAGAATTGATGAATGGGGTCTTGTGGTGAACTCGGAGAGTTTTAAGACAACAGCTTCCTCTTTTGATGGTGATAGGATCAAAAAATTA TCCAATAGATTTGTTGAATCGGCAAGGACGTCCGGGGAATCGAATTATGAGTCCGAGTCATCATCAGGGGTGATCCCAAGGGTCTCGCGGGAGTTGAAGG AAGCATTGGCGACGCTACAACAGACATTTGTTGTCTCAGATGCAACGAAGCCAGACTGTCCAATCATGTATGCCAGCAGTGGCTTTTTTAGTATGACCGG TTATTCTTCGAAGGAGATTATCGGAAGGAACTGCCGATTTCTTCAGGGGGCTGATACAGATAAGAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAAT GGGAAAAGTTATTGTGGCAGGCTTTTAAATTACAAGAAAGATGGAACTCCGTTCTGGAATCTTCTAACTATCACTCCCATCAAAGATGATAATGGCAATA CAATCAAATTCATAGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGTCTGAATGAAAAGGCGTTACGACCAAATGGATTGCCGAAGTCGTTAATTCG TTACGATGCTCGTCAGAAGGAGACAGCACTGTGTTCCATGACCGAGGTGGTCCAAACTGTTAAGGATCCAAAATCCGTTGTTCGGGCTAGGAATGATGAT ACTGCCAACAGCCTTGTAGAGCAAGACAAGGTCGATGATGATTTTGTTTTGCCGAAGTCTGTTGAAACCAGGAATACAAGTACACCTGGTAGAAAACCTT CTTCAACTAACATCCAAAGTGATGCATCACGCCTGAGTTCTACTCAGGATAGGAAGAGCAAGTTATCAAGAAAATCAGGACGGAGTTCCTCCACGAGTTT CAAAGGGAAATCTCTGAGTTCTGCCAGGGGAGAGGAAGAGACACCCATTGTCGAACTAGAGGTTTTGATGACGAAGGAAATAGAGCGGCCTGACAGCTGG GAGCGCTCGCAAAGAGAAAGAGATATAAGGCAGGGAATTGATTTAGCAACGACATTGGAGCGTATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTC CCGATAACCCGATTATATTTGCATCCGATAGCTTTCTTGAACTTACAGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTATAGTTTTTTCAC TACATCTGCATGCTAAAAAAGTTGAGGTTTCTTTTGTGCTCACTGCTTTTTTCAGAAACATTCTCGCAAAGGGTTTTTGTCCAGTTTTAATAGATTAAAT GTATTGTCAATATCATACAGTCCCCTACCAACTATATAAGTTAGTCTCAGTGGTTCCTGATTGTGTGGTCTCATATCATTTTCTGCTAGACTAAATATCA TGTCATGTTTCTGATATTCTTAAATCAATATTTACTTCATGCAAGCATTTGTTTACTAGGCCAGTTACATGTCGGCGCACTTCATCTATTTTGTAGGTTT CTTCAAGGACCGGAAACAGATATGTCGACCGTTGATAAGATTAGAGATGCTATCAAAGAGCAGAAGGAGATTACTGTTCAGTTGATCAACTATACCAAGA GTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGATGGAAGCGATCA TGTAGAACCCTTACAAAACCGCTTGTCCGAAAGAGCTGAGCTACAAAGTACTAAGTTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTTAGAGAA CTTCCTGATGCCAACTTGGCCATATTCTATCACTCCGGCTCAAGCTATTAGGGAATGTTCTAACTCGAGTCATTTGTTAGACGTCATGCCAAAAGCTAGC TCATGGTTAACCTCTCCGGCATAAAAGCTAGCTCATGGTCTCTTATACTAATATTCTCTTGATCACTCTTCCCATAGTTTCATAGTATGACTCGAAAGCT TGCAGCCTCTCTAGTCTGCACATTTTTCATGAATTCTTTGTTCTTGTAAATAGAAGGCTTCCTTGTTTGGGGAATAAAATACTGCAGGGGTTATTTAAGC TTGTGAGTGGCACGCTCAGCATAGTCGCATAGTCATGGGCCCGGGGGTCACATGTGATTGCTGAGTGTTACCGGTGACACGCTCAGCGGGAGGTCGCATG TCATTGCTCGGGTGTTACATTAAAAAGATGAGTATTGTCATGAACCAACTTTCCTTAAAGATAAACCGTTAAGTGAAGCAATATGTATGGTTTTATATAC CTAACTAGCTACTACTTCAACCATAGTCACCTCGAACGCGGTTCTGTACGATATAGGTACGGGTACGCAGTACGCTGCTACCACAAATATTCGGTACGTT AGGTAGCTAGTGTCTTCAACATCTTCCCATATCAAGTTACCAACCATTTCTTTTACTTTTTTTCTCTAGCTGTGTGAACTTAAAAAGTAACCTTGTATTT ATGTTCTATGATGTCTTATGGGTTTGTGTTATTGTAGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTCCCACTACCTCACAAAAGGGAC AA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82168; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_147452
| Blastp | Phototropin-2 from Arabidopsis with 60.58% of identity |
|---|---|
| Blastx | Phototropin-2 from Arabidopsis with 59.32% of identity |
| Eggnog | Histidine kinase(COG2202) |
| Kegg | Link to kegg annotations (AT5G58140) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424317.1) |
| Pfam | PAS domain (PF13426.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |