Id Trinity | FTRINITY_DN59027_c0_g4_i4 |
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Name Transcript | Ll_transcript_144772 |
Sequence | GAGCAGAGAGCATGGGCTCTTGGTGATAAATTACGCAACTGGATGCATATTTGAGTATGATGCAGCTCATCCAGAGGGTTCTGGCATTGGTTTTAAGGAG GAAGACAAACCCAACTTCATGGGTTCTTTCTATTCCAAGACGAAGGCCATGGTTGAGGAGCTATTGAGAGAATATGACAATGTATGCACCCTCAGGGTTC GCATGCCAATTTCATCAGATCTGAGCAATCCACGCAATTTCATTACCAAGATTTCTCGCTATAACAAAGTAGTTAACATTCCAAACAGCATGACTATTTT GGACGAACTTCTTCCAATTTCAATCGAGATGGCAAAGAGGAACCTGAGGGGCATATGGAACTTCACAAATCCGGGGGCTGTTAGCCATAATGAGATTCTT GAGATGTACAGAGATTACATTGATCCCAGCTTCAAGTGGAATAACTTCACACTCGAAGAGCAAGCCAAGGTAATAGTTGCAGCAAGAAGCAACAATGAGA TGGATGCCTCCAAATTGAAGAATGAGTTTCCGGAGTTACTTTCCATCAAGGAATCTCTGGCCAAGTTTGTCTTTGAGCCAAACAAGAAAACTACTTAAAA ATATTAAGGCACTTACATTCTTAAGAGACATCAGTTATTCTCTGCATTTTTGTGTCTGGCTACACAGATCACTGGTTGTTTAATTAGTAGCTCCATCTAG TTATTTTAAAGGGTGACAAGTATTATCATTGATGTTAGGTTTGGTTCCTAAATTTTCATTGCTACAGCTTTATTATAGTTTACTAGTGTGTGCTCTTTTA AGCTTGTAGTGAGCAACTTTTGCATCCTGCAAGACATTTATTCTTTTATGGTTTATATATATCCCTTTTGTGGGTTATGCTTGTTTTGTATTTGCATTTC TATATGCAATTGAAAGCATGCTACGGATATATTCATTATATTTCATCCAGTTAAAGAAGTTAGTGTGATGTAAACACTTGAAGTTGTGTGCAAAATACAG ATATGATAACAGTGGGGTTTTTGGTCCTTGATAAAAATCTAAACTAGCTTCATGTTTATTGCAGTCTTCTTCTGTATGCCCAATTTGGGTGTCAATGGTG TGAAATATTCAAGTGAGGCTTGAAAGAAAAAATACAAACTTGAACTTGCTTTCAATACAAACTTTGTGGGAGCACCTCAAGTTCATTTCTAACACTTCTC TATTGCTAAAAGTGTTGCAAAACTCTAGTTTTAAGTTGGAACAAAATGTTGTGGCATGACATTTCAAGACTGCATATGCAGACCACTGAAATGATGAGAC TAATCCAAAGAGGCTATCTATTCTCCTTTTATAGAAGAGAAAGTAAACTTGACTATATGAAGCATGAACATGTACAAGGAACTATGGAACTAAAAAACCT TCATTCTTTATCCTGCAATTGGTAGTATCAATCTTCCATTTTTTCTTGTATCCACATTTCTATGTGGGAATATATGTGATAGCCGACTGTATCCCAACGC GCAAAAGTATAACAATACAATTCACAATTTAGAGTTACAAGATGCAGCAACTAGTTCCTTCGGAATTGAAATGATACTGTCTAAGGATTCAAGCGTATAC CGATCATTTGTCTGAGTTCTTCCATTCCTAAACAATTATTATAAGCTGTTTTGGATAGTAAATAAGTTCATCTAAACATAATTATTAATAATGTTGCTTT ATAAATCTATG BLAST |
Tissue | flowers |
Gene name | LI_gene_82203; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144772
Blastp | Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase from Arabidopsis with 86.73% of identity |
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Blastx | Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase from Arabidopsis with 86.53% of identity |
Eggnog | dTDP-glucose 4-6-dehydratase(COG1088) |
Kegg | Link to kegg annotations (AT1G63000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443848.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |