| Id Trinity | FTRINITY_DN59028_c5_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_146422 |
| Sequence | GTCAAAGTCATGCCCGTGCACCAGTCTTATTGGTCAGAAATAAATTACCATGCTCTAACCTTTTACACAAATCATGATACACTAACATTGAAAAATATAT TTAAACTGTGAATATATCATCTACGATTCATATTTAATTATAATACTCTTAAATAAAGTAATACAATAATGAATAATATATATAAATCTTTTACCCAATA TATAGAGATATTACAATGTATTATATTTATGTGAAAGACCAAACTCAAAATTTCAGTGTACTGTGTTTCACTTCAACTTTCTACTTAAACTAACCTTCCA AAGGTAACAGTGTTGTTGTTGTTGTTGTCTTCATGGCCAAGCCAGTGTCCATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTGAGCACAAAACC AATGCCAGGAACTCGTTGGATCAATCTTCTAGTCCAACAAGATTGTCGTGTTGAAATATGCACTGAGAAGAAAACTATTCTGTCAGTTGAAGACATTATT GCTTTGATTGGTGATAAGTGCGATGGAGTTATAGGACAGTTGACTGAAGACTGGGGAGAAAAGTTATTCTCTGCCTTGAGCAAAGCTGGAGGCAAAGCTT TCAGTAACATGGCAGTTGGTTACAATAATGTGGATATCAATGCTGCAAACAAATATGGTGTTGCTGTTGGAAATACTCCTGTAAGCTATCTCTTTCATAT TGCAATTTATATATTAAATGCATGTCACTTTTCTTTTTGTTAAGCTGCAATTTTTGCTTGGAAGAAGGTTCCTTTTTTTAGTAAAACCGTGACCTAGATG TCACCGGCTCAAATTCTACACGCAGTCTCTCCACTTGTAGGGGATAGGATGCGTATATTTACCTTCTCCAAAGTCTAAACCCTAGCTATCAGATGGAAGC CTCGAGTATTGGGCTGTTGATTATAATATAATTGCAACCAAAAAGACTAATATGTGATGCCGAAGTGGTTCTAGTTGTGCTCAGTATGTTTTTTGAGCAA AGAAGTGATAGCCTTGAAGAGAAAATAGTGATTCAAACATTAGTTCATCATTTATTTGTTAGGGAGTGCTGACTGAGACAACAGCAGAGCTAGCAGCTTC ACTGTCTTTATCGGCTGCAAGAAGGATAGTTGAGGCCGATGAGTTCATGAGGGCAGGACTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACCTG CTGAAAGGACAGACGGTTGGCGTTATTGGAGCCGGCCGAATTGGATCAGCTTATGCAAGAATGATGGTTGAAGGCTTCAAGATGAACCTAATTTACTTCG ATCTCTACCAGGCGACTCGACTCGAAAAGTTTGTTACAGCTTATGCTGAATTCTTGAAAGCAAATGGTGAACAACCAGTAACTTGGAAAAGGGCATCAAC CATGGATGAGGTCCTCCAGGAAGCAGATCTAATCAGTCTTCATCCTATCTTGGACAAAACCACTTATCATCTCGTCAACAAGGAAAGACTCGCCAAGATG AAGAAGGAAGCAATTCTTATAAACTGCAGCAGAGGGCCTGTTGTCGATGAAGTTGCGCTTGTAGAGCATTTACGACAGAATCCAATGTTTCGAGTAGGCC TTGATGTGTTTGAGGATGAGCCCTACATGAAACCTGGGCTCGCAGAGTTGAAGAATGCCATTGTGGTACCTCATATTGCATCTGCCTCCAAGTGGACCCG CGAGGGAATGGCCACATTAGCAGCTCTAAATGTGCTGGGAAAAATTAAAGGGTACCCAGTTTGGTTTGATGGCAATAGGGTGGAACAATTCCTTGATGAG AATGCTCCACCTCCAGCTGCAAGCCCAAGCATAGTTAATGCAAAAGCCCTTGGTTTGCCAGTTTCAAAGCTATAGGCATATATGTGCTTTTGATCTACAA GGGCCTTCACTTGCAACCATGTCCATTTTTTTGTGTGGAGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82219; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146422
| Blastp | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 87.6% of identity |
|---|---|
| Blastx | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 88.05% of identity |
| Eggnog | Dehydrogenase(COG1052) |
| Kegg | Link to kegg annotations (AT1G68010) |
| CantataDB | Link to cantataDB annotations (CNT0001136) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452618.1) |
| Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |