Id Trinity | FTRINITY_DN59053_c1_g1_i14 |
---|---|
Name Transcript | Ll_transcript_147025 |
Sequence | TTTCCCCTCTAATTTTAATATATTTTATAAATGGGCCTATATGAATATTATTTTCTTCTTCTGACGGGGTAATCTGCTACGTTCACAAAACTATCCTTTC AGCTATCTCTGTATTACATTTCTCTTTCTATTTCTCTCTTCCTCTTTAACCCTTCTTCCTCTTCGATCCGAACCCCATCGTTTTCAACTCCGATAGATCT TCATCTCTCACCCACCTTTCACATAATCCCCTCATTCACTTAATCGATTATTCCATTTATCCATCTTCGTACCTTTCTGCAATTGCTTCTCTAGGGTTTC TACCAGGAATCACGTTTTCCAGTTATATTTGGCCTTTGAATTGGCTTGAATGACCGTGTTGCTGCGACCAGGCTATGACTTCAAGCATGTTGAGCGGGGA GCGAAGATGGGCTGGGGCCTCTTCCAGAAGAGGTGGCATGACTGTTTTAGGGAAGGTTGCAGTTCCAAAACCTATTAACTTACCCAGTCAGAGGTTAGAA AATCATGGTCTAGACCCAAATGTGGAGATTGTTCCCAAGGGTACCCTCAGCTGGGGTGGTAAATCACCCTCTTCTTCATCAAATGCATGGGGTTCTTCTC CGTATGCAAACACCGACGGTGGAGCTACTTCTCCCAGCCACCTCAGTGCTCGCCCATCATCTGGTGGAAGTGGCACACGACCTTCAACTGCTGGGAGTGA TAGGGCTTTTGATACTACTTCTAATGCATGGGGGTCAAATTCTCGGCCTTCATCAGCATCTGGGGCTCTGATATCAAATCAGTCTTCGCTCACATCATTG CGTCCTCACAGTGCAGAAACAAGACCTGGTAGCTCTCAGCTGTCTCGATTTGCTGAACCCTTGACTGAAAATTCAGGTTCCTGGAGTTCTGCTAGGACTA CGGAGAAACTGGGAGTTGCACAACCCAAGAATGATGGATTTTCACTGAGCTCTGGAGACTTTCCAACCCTTGGTTCCGATAAGGACAAGTCAGTCCTGAA TTCTGAGTTGCAAGACCACAGCTTGGAATCTCATGCTCGCCCTGGCTCATCTTCAGTGCTCAGGAAAGATATATATGATACCTCCGTTGATGATGTTCAT GTTAATGTTAATGTGAAAGGTGGAACAGTAGATTCTTGGAGAAGAGATGATCAGGCTCACAATGATGGTGTGAGGCCTAGCATAGAGATGTGGCAGGGGA ATACCCACTCTTACCCGAATGCTGGTTTTCCTCCTCAACACTTTGATGCTTGGCATGGTCCTCCAGTAAATAACCCTCAAGGTGGTGGTGTTTGGTTCAG GGGTCCTCCTAGTGGTCCTCCATTTGGAAATCCTGTTGCTCCAGGTGGCTTTCCAATTGAGCCGTTTCCATATTATTCTCCTCACATTTCACCTACTGGT CTTGCCAACCCGCCGCCTGTTGCATGTCCTGGAACAGGACCAAGAGGACACCATAAAAATGGAGATATCTACAGACCTCATATGCCTGACACCTATATTC GTCCATGCATTCCTGTCAGACCTGGTTTTTATCCTGGTCCTATGGGCTATGAGGGATATTACGGTCCTCCAATGGGCTACTGCAATCCAAATGAACGAGA TGTTCCTTTCATGGGCATGGCAGCTGGACCCCCTGTTTATAATAGGTATCCGAATCAAAATCCCCCTGAACCTGGCAATTCCCAAGGTAGATCTGGTGGT TATGGTAGTGCTGGAAAGCCGTTGACCTCAGAGCATGTAGAGTTCAGCCATCCTCCTGATACTGCTGCACCATACAAAGTTCTTCTTAAGCAACATGAGT CAGATGGAAAAAATGAACCAGAAAAGTGGGAGGATTCGGCAACCACCGGTGCATCATATATTAATGGGAGGGACCGAGCAAGAATGTCTGTCTTGGAGAA TGAGCAGAGTTCAAATTACAGAAAGAATGGGGAGATTGATTTGAGGAGAAGTGCTCATGGTGAAGAAGCTTCTTTGGAAAATCAAGTATCTAGTTCTTCT GTTATTAAGGCCAAATCTCCTGAAAGTTCTGGAAACATGAAGAAATCTGGTGATATTTTAGCAAGGAAATTGGATAGTGCTGCCTCTGATATCCCAGAAA TCCCACCTAAAACATCTGCTTCGAAAGATGCCAATTTGATTCAGAAGATAGAGGGTTTAAATGCAAAGGCGAGGGATAATTCATCTGCTAGAAATAAATT TCATGCTGGCAGCACTTTTGTAAACCAAGTGGAAAGTGAAGCTGGTACTGCCATTTTTACTGCGACAACCCATGCCACTGAAGTCACAAGTCCAACGCAT CGTAAAGTGGGTGCTTCTGGTGGACAAAAGAATCTCGAATCCTTATCTATTGGTGGAAAAGCCACATCCAGGCATACTGCTCATGGCATGCAAGGTAAAA GTGATCATCGTAACAAGGGAGTATTAACTAATCAAGATGCCGATGGTTGGCGAAAGAAATCTGTGGTAACTGATTGTTTAGCTTCATCAGCTCCACTGTC GGAGCCATCTGATGTTCTTGTTGGTGACCATAGAATATCTTTAGAGACATATGATAAGTCTGGGTCTTATAACAAAGGAAGGCACGATGGAGATTCTGTT CAAGCTAGGTCGGATTCAGTTGATGACCATGCACAGGTAATGCGCACACCTTTTCTACACTTTCTAGCTAGCCTCGATACATTTAACACTTATGCAATAC ACTTTCAAACTCTAGCGTGTCAAAATGAAAGAGTTAGCCAAGCAACGGACTAAGCAATTGCAGGAGGAAGAGGAGGAGCGCATAAGAAGGCAAAAGGCTA AAGCTCTTGCGAAATTGGATGAATTAAACAGGCGTTCTCAAACAGTGGCGGGGTCAACTCAGAAAGAGAATGCTACAAGTTCTGCAGTCCAGAATAAGCA AGATGATTTACAACCTTCTGAATCAGAAGTTGTAGCAGACATATGTGGAGTTGTCAAATCGGCTGTAAATTCTAATACCAACACTGTTTGTCAGTTTAAT GATACCAGCTTTAATAAAGTGGAAAAACCCATCCTGTCCAGTGAGCCACCTGTAGTGACTCATAAGAATTCTGTTAAAGGAACTGTTCTGATTCAGAACT TGCCCCAGGATGGTGATAGTGCTGGTGCCGTTAATGATTTACAGGTTTACAACACTACTGCCTCTAAGCAGAAAAGAATAAGCTATAAGCAAAAGCAGAG CATTTCTTCGGAGAAAAAGTTGAGTGAAAAGGTTGTTTTCACCAATTCGACTACCTTGAAATTTGAGAATGACAAAGTTGTTGATGTTACTGTGCCTTCT TGCAATGTTACAAATGAAGTTGGTTTAGCATGTGTTCCTGGATTACCCGTGAATTCAAGTGCTATGGTTGAGTCTTCTGTAAATCAGAAAAAGTACAGGA ATGTCAAAAACAAACACAAAGTTGAAGAGAGTTCATCTCTGACTGCACCACCATTGGCACCAAAAGAATCCAATCTTTCAGAAAGTTCTGTTGAAAGTGA TAAGCCCAAGGCTTCTGACTTTGAGTTAGATCAGTGCTCACTTCACCCTGCGTCCTTGTCTAAAGACTCTAATCAGTTTTCAGAGCAGCACAGGCATTTA GCAAATGAGGAGTCCCATGCTAGGATGACTAGCCAGGGTAAATCACAAGATTCTCGTAGGAAGCCAAGAAATTTGCAGACTAATAGACCAGCAGAGAAAT CCCATGGAAGTGATGTTGTGATGTGGGCGCCTGTGAAACCACAGAACAATACCGAGGTCATGGACGAATCAAGTGAAAAAAGTAATTCTGAGGCAGCTAA TCCTGTAAAGAGAGATCAGCAGGTTCATAATTTAAAAAATAAGAGGGCTGAAATGGAGAGATATATTCCAAAACCTGTTGCGAAAGAAATGGCTCAGCAA GGAAGCACACATCAGGTGGTTTCATCAATCAGTCAGGCTACCGCAGGTCAGGATGTTGAAAGAGCTGCTTCTGGTTCTCAGAGCCCTCAGCATACGAATT CAGCTTTTGGAAAAGTGGGTTTTCTAGTAGAGTCTAAAAATAGAGATGGTAGGCATAATAAGCAGGGAAAAGCACATGGATCATGGCAGCAACGGAATCT GACAGAATCAACTAATGTTCATGATATGCAAGATGCACTGGACCGTGATTCAACCTCTGTTCCAAATGTTCAGAGACCAACAGAGCATCATGTAGATCAT AAGTCTGAAACAAGCTTGGTGAAAGGGCAAACAAAGCATTTTAATGATTCTAGTGATCTTGATGGTTTAAGCAATTTCATCAATCACAATTCTGCTTCTC CAGTTTCTGTTCCAGGTATTAAAGATCATGCAGTAACAGGGAGAGGAAGGAGGGGTCCTTTCAGAGGACATAAGGGTCCAGGGGTGAACCATGATGCTGA TCACAATAGAAGTACCGGGGAGACAGAGAAGATTGAAAAACATGTATCATCCTCTGAGCAAAGTCAAACAGATGTTGTTGCTGCTAAAGAAAATCGAGTT GTTGGGGAACGTTTGACGTCTCACTGGCAACCTAAATCTCAGGCCTCTAATAATCAGAGAGGAGACAGACCCATTGATCAAAATGTTGGCTCACTGGTTA TCAGAGTTAAAAAGGATCATGCTCTTGATAGTGAGTCAATTTGGGCAGGTCGTGACAAGGAGTCTAAGGCTTATGCAGCCCGACCTCACCATGATAAATC GGTCTATGGAAAGAGCAAGGAAGGAGAAGCTCCACATTTTGGGAATCAGGACTCTGGAAGAGAGAGAAAAAATGCTCCAGCAAAGAGGCCTTCCCTCTCC CCAAATAAGGTTAGCTCAGTTGAGCAGGCTCCAACAAGTGTGGATCTTAGGCATGGGCAACACCCTTCATCTGGGTTTGGTAAAAACGGAAACCAAAGTC GGTTTGGAAGAGGACATGAATCTCGTGGAGATTGGAAATCACCTGCCCAGGATAACAGGCATTATAACCACCAACCTAAAAACTGGGAAAGGCAGGGCTC CAACGTGCATTATGAGTACCAACCTGCTGGGCCATATGATGACAGCAAAGTGGACCACTTTGAACGACCCAGAGATGGCAACTATGGGGGACCTAGGGAT GGTAGCCATGCTGGGCAGAGAGATGGAAACCATGGTGGAGGGAGATTCAGGGAGAGAGGCCATACTCATTCACGACGAGGTGCGGGAAACTTTCAGAGAC GGCAGGGTGGTATTGATTAGATACTGTGTTAATCAGCAGTGGAGACTTCTCTTTAGGTAGTCTTTGTGTGTTCCATTAGAAGCCATACATATTGCTTTCC TAGCTTATTCAGCCATGTTTTCAGGGGTAGAAGCGAAGATGAT BLAST |
Tissue | flowers |
Gene name | LI_gene_82435; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_147025
Blastp | Protein MODIFIER OF SNC1 1 from Arabidopsis with 31.76% of identity |
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Blastx | Protein MODIFIER OF SNC1 1 from Arabidopsis with 41.03% of identity |
Eggnog | protein MODIFIER OF SNC1(ENOG41124H0) |
Kegg | Link to kegg annotations (AT4G24680) |
CantataDB | Link to cantataDB annotations (CNT0000576) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463577.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |