Id Trinity | FTRINITY_DN59053_c1_g1_i5 |
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Name Transcript | Ll_transcript_147014 |
Sequence | ATCAAATTCTCGACCTTCATCACCAACTGGAGCACTGATATCAAACCAGACTTCGCTCACATCATTGCGTCCTCGCAGTGCAGAAACAAGACCTGGTAGT TCACAGTTGTCTCGATTTGCTGAACCCTTGATTGAAAATTCAGGTGCCTGGAGTTCTGCTAGGACTACAGAGAAACTGGGAGTTGCACAACCTAAGAATG ATGAATTTTCACTGAGCTCTGGAGACTTTCCAACCCTTGGTTCTGAGAAGGACAAGTCTGTCCTGAATTCTGATATCCAAGACCACAGCTCTGAATCTCA TGCACACCCTGTCTCATCTTCAGGGCTCAGCAAAGAGATATATGATACCTCCGCTGTTGATGATGTTCATGTCAATACTAATGTGAAAGGTGGAACTGTA GATTCTTGGAGAAGAGATTATGAGCCTCACAATGATGATATGAGGCCAAGCCTAGAGACATGGCAGAGGAATACCCATCATTACCCTAATGCTGGTATTC CTCCTCAACACTTTGATGTTTGGCATGGCCCTCCAGTAAATAACCCTCACGGTGGTGGTGTTTGGTTCAGGGGTCCTCCTAGTGGTCCTCCATTTGGAAA TCCTGTTGCTCCAGGTGGCTTTCCAATTGAACCGTTTCCTTATTATCGTCCACATATTCCACCTACTGGTCTTGCCAACCCGCAACCTATTCCATCTCCT GGAACTGGACCAAGAGGGCACCATAAAGATCGAGATGCCTACAGACCTCATATGCCCGATGCCTATATTCGTCCAGGCGTTCCTATCAGACCTGGCTTTT ATCCTGGTCCAATGGGCTATGAGGGATATTATGGTCCTCCAATGGGCTACTGCAATCCAAATGAACGAGAAGTTCCTTTCATGGGCATTGCAGCTGGACC CCCTATTTATAATAGGTATCAGAATCAAAATCCTCCTGAACCTGGCAATTCTCAAGGTAGATCTGGTGGTTATGGTACTGCTGGAAAGCCACTGACCTCA GAGCATGTAGAGTTCAGCCATCCTCCTGATACTGCTGGACCATACAGAGTTCTTCTTAAGCAACATGAGTCAGATGGAAAAAATAAACCAGAAAATTGGG AGGATTCAGTAAATACAGGTGCATCATATGTTAATGGGAGGGAGCAAGCAAGAATGAATGACTGGGAGAATGAACAGAGATCAAATTACAGAAAGAGTGA CGAGATCGATTTGAGGATAAGTGTTCATGGCGAAGAAGCTTCTTCTTGGACTTTTGAAAAAGAAGTATCTGGTTCTTCTGACATTAAGGCCAAATCTCTG GGAAGTTCAGGAAACATGAAGAAATGTGTTGATATTTCAGCAAGGAAATTGGATGATGCTGCCTCGGATATGCTCGAAGTTCCCCCTAAATCATCCGCTC AAAAAGATGCCAGTTTGATTCATAAGAATGAGGGTTTAAATGCAAAAGCTAGGGATAATTCATCTGCTAGAAATAAATTTCATGCTGGCAGCACTTTTGT AAACCAAGTGGAAAGTGAAGCTGGTACTGCCATTTTTACTGCGACAACCCATGCCACTGAAGTCACAAGTCCAACGCATCGTAAAGTGGGTGCTTCTGGT GGACAAAAGAATCTCGAATCCTTATCTATTGGTGGAAAAGCCACATCCAGGTTTGGCCATAACTTCTTGGTATTAACTGATTGTGGTTCATTTATCTTAG TCCAAGTAT BLAST |
Tissue | flowers |
Gene name | LI_gene_82435; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_147014
Blastp | Protein MODIFIER OF SNC1 1 from Arabidopsis with 37.32% of identity |
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Blastx | Protein MODIFIER OF SNC1 1 from Arabidopsis with 34.02% of identity |
Eggnog | protein MODIFIER OF SNC1(ENOG41124H0) |
Kegg | Link to kegg annotations (AT4G24680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463578.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |