Ll_transcript_147078

• Id Trinity: FTRINITY_DN59057_c0_g1_i1
• Name Transcript: Ll_transcript_147078
• Sequence: TTATCATTGACTCTCGGACAAAAAAAATCGGATAAGATTTTAAAGTCATGACAAAAAATGGTGGATGAATGAATGCAGAAGAGAAGAAAAACGAGTGTAA CAGCTATATATCATCTTCATACGTTTACAATGGGCTAGTTTCTCAAATCAATTTTTTTTGAGAATTTTGGTTAATCCAATTAGGGTTTCCAAAAGTGTTC TTCTTTTTATATTTTACTATAAATTCATAATCGAATTAGCTTTTTCTCTTATCGGAATCAACAACGCTGGGGAGTGAAGAATCTGATTTAGGTCCTCGCT CTCTTTTTTTCTTCTCTCGCTTTTGGAACTCTCTTATGAACGATAACATGGAAGTCGATTTACCCTCTGATTCTCTATCACTCAAGCCCCGTGATCGAAT TATTAGGAGGCTTGCTCAGTTTGGAGTTCCTGAGGAGCAGCTTGACCAGCCTGGTTTGGTTGCTTTTGTTAAGGATAAGAGGGAGCTGATACCTGAGCTG GTGTCTGTCATATTGCCTACAGATGTGGAAGTGGGTGAAGCATTGCCAAATTCTAAGTCGGGCTCGAAGAAATTGCCTTTGGGTCTTACTATGAAGAAGA CTTTCCGTCAGAGCATGTTGTGGTTGCAGTGGTTGATGTTTGAGGGTGACCCAGGTGCTGCCCTGAAAGGCCTTTCCGAGATGTCTGTTGGGCAGAGGGG TGTGTGTGGGGCAGTTTGGGGACATAATGATATAGCTTACAGGTGCAGGACATGTGAACATGATCCAACTTGTGCAATTTGTGTTCCTTGTTTTGAGAAC GGGGAGCACAAGGGCCACGATTACAGTGTTATATACACTGGTGGTGGGTGTTGTGATTGTGGGGATGTGACAGCATGGAAGCGTGAGGGTTTCTGCTCGA AGCATAAGGGTGTCGAGCAGGTACAACCCCTTCCAGAGGACTTGTCAAAATCCGTTGCGCCTGTGCTTGGTTCCCTGTTTATTTGTTGGAATGACAGACT AAAGCTTGCGAGCGATTCTGCAATGTCCGCAGAAAGAAAGAAGGCTGCAAATGAACTAACTTTTGCTGTAGTTGATATGCTTTTAGAATTTTGCAAGCAT AGTGAGAGTTTGCTCATTTTTGTTGCTAGGTCATTGTTCTCTTGTACTGATTTATTGAACATTCTGGTGAGAGCTGAAAGGTTTTTAAGTGATGTTGTTA TAAGGAAACTCCATGAGCTACTCCTGAAGTTGTTGGGAGAACCTAATTATAAGTACGAGTTTGCCAAGGTTTTTCTCGCTTACTATCCAACTGTTATAAA TGAAGCCATAGAAGAGTTCAGTGACAATCCTCTGAAGAAGTACCCACTACTTTGCATGTTCTCTGTGCAAATACTTACAGTGCCCACCCTCACCCTACGT CTAGTGAAGGAAATCGACCTACTAACCATGCTGTTGGGATGTTTTGAAAAAATTATAAATTCTTGTGCTGAAGATGGACACTTGCAGATTTCCAGGTGGT CAAATTTATATGATACAACAATACGTGTTGTTGAAGATATTCGTTTTGTTATGAGCCATGTGGTAGTGCCCAAATATGTAACCAATAACCATAAAGATAT CTCAAGAATGTGGTTGAGACTCCTGTCCATTGTGCAAGGGATGAGCCCGCAAAAGAGAGAAACAGGTCAGCATGTAGAAGAAGAAAATGAGAATGTCCAC TTGCCTTTTGTTTTAGACCACTCTATTGCAAATATTCATTCTCTATTAGTGGATGGGGCATTTTCTGATTCTAGCAAGGGAGAGATGGAGGATGAAATTG TTTCGAGCTCAAAAACACATGAATCAGATGATGGAGATAACCTAAGACATGCGAAGGTAGGGAGGCTATCCGAAGAAAGCTCTGCATGTTTTGTGACCAG TAGGAACAGTGCCTTTTCTTCACCAGAGGTTCCTGAGACAAATTCCAATGCCTCTTCTCATCTTCATATTCCACATCCTGTCACGTGGTTGATATATGAG TGTTTAAGGACTATTGAGCATTGGCTGGGAGTTGAGAGTAACCCAGATGCACTTCCTAACAAGTTTAACAGTGGTAGTGTCAATGATGGCAATTTTTCAG CATTTAAGAGAACAATTTCTAATTTCAGAAGAGGTAAATATACTTTCGGTAAGCTTGCAAGTTCAAGTGGTGGCTTGGACATGAGTAAGAATGCATTGAA GGATGGTAGTGTGAAAGCAGATGGTGAAATTAATTCAGAAAACAGTGGCACTCGTCTTGGTTTTGATGATAATGCAATGGATGAGGATTTTCCCACAGAA TTAGATGGTCTGCGTATTCTATCATTGCCTGATTGGCCAAAGATTGTCTATGATGTTAGTTCACAAGAAATATCTCTACATATTCCATTACATAGATTGC TATCCATGCTGTTACAAAAGGCACTGAGAAGATATTTTAATGACTCTCAAGTGCCAGATGTGACTGATGTTTGCTTTACCAACTCATTGTCAACAATCTA CACTGATTTCTTTGGACTTGCTTTACATGGAAGTCATCCTTATGGTTTCTCTGCCTTTATAATGGAGCATCCACTGCGGATTAGAGTATTTTGTGCTGAA GTTCATGCTGGAATGTGGCGAAAAAATGGAGATGCTGCTTTACTATCTTATGAATGGTACAGATCAGTTCGCTGGTCTGAACAAGGTCTGGAGCTTGATC TATTTCTTCTTCAGTGTTGTGCTGCATTGGCTCCAGAAGATGAATATGTCAGCAGAATTCTAGATCGCTTTGGATTGTCAAACTACTTGTCTCTGAATCT TGAGCGGTCTAGCGAATATGAACCTGTTTTAGTCCAGGAAATGCTTACTCTTATTATTCAGATAGTAAAAGAAAGGCGCTTTTGTGGGCTAACTACTGCT GAAAGTTTGAAAAGAGAACTAATTTATAAGTTAGCCGTTGGAGATGCTACTCACAGTCAATTAGTGAAGTCCCTTCCTCGTGATCTCTCCAAGTTTGAAC AGCTTCAAGACATTTTGGATACTGTTGCTGTTTATTCTAATCCGTCTGGCTTTAATCAGGGTATGTATTCTCTGAGATGGCCATTCTGGAAAGAATTGGA TTTGTATCATCCACGATGGAACTCAAAGGATTTACAAGTTGCCGAAGAAAGATACGCACGCTTCTGTGGTGGCTCTGCATTAACTACTCAGTTGCCCCAA TGGACCAAAATTCATCCTCCCCTGAAGGGGATAGCTGGAATAGCCACCTGCAAAGTTGTTTTACAGATAATCCGTGCCGTCCTATTTTATGCTGTTTTCA CTTTTAAATCTGCTGAATCTCGTGCTCCTGATGGTGTTCTCTTACCTGCACTGCATTAGCTATCATTATCATTAGATATATGTTTTCAGCATAAAGAATC TAGTGAGAATACATGTCATAGTGTAGCACAGACTCCTATAATTGCCTCCTCTCTAGAAATAATTGATGCAGATGCTTTTGACGGTGTTGGTGAACAAAGC TTGTTGTCACTCCTTGTTGTGTTGATGGAAATGAACAAGAAGGAGACTGTAGACAACTTTGTAGAAGCAGGTGGTTTCAGTGTATCTGCTTTAATTGAAA GTTTACTGAAGAAATTTGCTGAAATTGACAACAGGTGCTTGACTAAGTTGCAAAAACTGGCCCCTGAAGTTGTGAGCAATATTTCTGGACGCAGTCCAAC TAGAGACTCAGGAGTCTCATTTTCAGCTTCTGATAGTGAGAGACGCAAGGCAAAAGCTCGAGAGAGGCAGGCTGCAATAATGGCAAAGATGAGAGCCCAG CAAACAAATTTTTTGGCGAGCATTGATTCCACTGTTGACTCTAGTTCTCAAGTTGATCACGAAGAAGGTGACTTAGACACCACTGAAAACGAGGCTGAAG AATCTAAACAAGTTGTTTGCTCTCTATGCCATGACCACAGTTCAGAACATCCAATTTCATTTTTGGTCCTTCTTCAGAAATCTAGGCTTGTGAGGTCTGT TGACAGGGGTCCCCCATCATGGGCTCAAATTTGCCGATCAGATAAAGAACAGATGCCTACCACCACCAAGGTAACAGCTACATCGGCTATGAACTGGAAC TCGGGTAGTTCAGGATCAACTTCATCTTCCCACTTAACTCAGTTAGTTCAGATTGCTGCCAATGAACTAGCTTCTAGTGGGCATCCTGGGGAAGTTAGCG CTTTTCTGCAATATGTCAAGAATCAGTTCCCATCTTTGGGAAATTTTCAACTCCCAGACACATCTTATGATGAAAAAGACAAGACACCATATACTTTTGA CACTTTAGAACAGAGTATGTACTTCTCCATTCGTGACGAAATGCATGATTTTGCGTTGTCTTCAGATTTGATGAATGAGGATGAGAAATTTCCAACAACT GGAGGGAATTCAAATATTATAAAAGATACTGGATCTGTGGTGTCCGGGAAATGTTCAAGTGATCTTATGAGAGAGATGTTAGAAAAATCTTCTGCATCTG AAATTGCTTGTGAGAATGCTTCTGTTGAATCAGCATCACAGCATCAAGTATATGATGGATTTGGCCCTATAGATTGTGATGGAGTTCATCTTTCTTCATG TGGGCATGCAGTACATCAAGGGTGTCTTGACCGATATTTGTCTTCATTAAAAGAAAGATTTGTCAGAAGAATTGTTTTCGAAGGAGGACATATTGTTGAC CCTGATCAGGGAGAGTTCCTCTGCCCAGTGTGTCGACGACTTGTAAATTGTGTCCTGCCTAATTTACCTGGAGAATTACAGAAGTCTTCGAAGCTGTCTA TTGGCTTAGCCATTGGTTCAATACATACAGCAGTCCCTTCAGCTGAATCTAGTGAAGTGACTTATTCACTCCGCCTTCAGCAAGCTTTGAACCTCTTGCG ATCTGCTGCCAGTACAGTTGGGAAAGATAAATTCCTGAAAGCAATTCCTTTGCGGCAGATTGATAGCACTAGACCAAATCTTGAAACTTTCTCCCGGGTG CTTTCTAACATATATTTCCCAGGTAAACAAGATAAGTTATCAAAATTTGCCAGATTAAATCACTCAATGCTGATGTGGGACACTCTTAAGTACTCCTTGA TGTCAATGGAGATTGCTGCACGTTGTGGAAGGACTTCTTTGACACCAAACTTTGCTCTTAGTGCCATGCATGAAGAACTCAAATCTTCTAGCGGCTTTAT TCTATCCTTGTTGCTGAAACTTGTTCAGAAGACACGGACTAAAAACTCTCTTCATGTGCTTCAAAGATTCAGAGGTATTCAGCTCTTTGTGGAATCAATT TGCTCAGGGGTTTCCCTGCATTTTGCAAATGATGACATGTCTGGGAGAGGTGATATGCTGTCTATCTTAAAGCATATTGAAATGGACCTCTCAAACATCG ACATACGCTTTTGGAAACAGGCTTCAGATCCTATACTTGCCCATGACCCTTTCTCAACATTGATGTGGATTCTCTTTTGTCTACCATACCCATTTTTGTC ATGTGAAGAATCTTTGTTATCCCTTGTGCATGTTTTCTATGTAGTAGCTGTAACACAGGCCATAATTTTGTATTGTGAGAGATCTCAGCATAAACCAAGT GAATCAGGCATTTCAAATTGCCTTATTACTGACGTATATAAAATCATCAGTGAATCTGGATGTGACCAACAGTACTTCATGTCAAACTATTTTGATCCTA ATGTTGATATTAAAGATGCAATTCGGAGGTTTAGTTTCCCTTATTTGCGAAGGTGTGCACTATTATGGAAAATACTCCATTCTTCTATCCCAGCACCCTT CTCTGATGAGGAAATTGTGTTGGATAGATCATGGAATGCCCCGAATGACATAATGGACAGGGCCAACATTGAACTGTTTGAGGTCACTAAAATTCAAGAG CTTGAGCATATGTTTAAAATTCCCTCTCTTGATGTGGTTCTCAAGGATGAAGTTTCAAGATCATCGGTCACTATTTGGTGCCGTCATTTTTTTAAGGAAT TTGAATCTCATGGTATTCAACCTACTATGTATGTAACACCTGCAGCTCCATTTGAGTTAATGAGATTGCCAAATGTTTATCAGGATCTTTTGCGGAGGTG CATCAAACAGCGCTGCCCTGAATGTGAATCTATTCTTCATGAGCCTGCATTGTGCCTACTGTGTGGTAGACTGTGTTCCCCTAGTTGGAAGTCATGCTGC AGGGAAAGTGGATGTCAAACTCATGCGGCAACCTGCGGAGCTGGTACTGGAGTGTTTCTATTGATTAGGAGAACAACAATCATACTACAGAGATCTGCAC GTCAGGCCCCCTGGCCTTCTCCATATCTGGATGCTTTTGGTGAGGAGGATTTTGAGATGAATCGAGGCAAGCCACTTTACCTGAATGAGG
• Tissue: flowers
• Gene name: LI_gene_82466;
• Additional information: details;

Expression of Ll_transcript_147078

FPKM

• FPAB: 8.1
• FPNAB: 7.3
• LF1: 7.7
• LF2: 8
• LF3: 8.7
• LF4: 5.6
• UF1: 4
• UF2: 8.2
• UF3: 8.6
• UF4: 5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_147078

• Blastp: E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 54.31% of identity
• Blastx: E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 49.7% of identity
• Eggnog: Ubiquitin protein ligase E3 component n-recognin 3(ENOG410XRM3)
• Kegg: Link to kegg annotations (AT5G02310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450222.1)
• Pfam: Putative zinc finger in N-recognin (UBR box) (PF02207.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;