Ll_transcript_147079

• Id Trinity: FTRINITY_DN59057_c0_g1_i2
• Name Transcript: Ll_transcript_147079
• Sequence: GAACAAAAGACACCTGAATGAGTGTAATAGCTATATATAGAATCATCTTCATAGTTTACCAATGATTCTGTATCTCACATCAAAATTTCATGATTTTCAG AAATCCAATTAGGGTTTTCAAAAGGGTTCATCTCTTCTTCCACTATAAGCTATAAATTGAGAATTGAAATAGCTTCTTCAATTCTCATAATCAACAAAAC TTGTGTAGTGAAGTCTTTGGTTTCGGTCTTCGCTCTCTTATTTTCTTCTCTGACACTCTCTCATGGCCGATGATATGGAAATCGATTCACCCTCTGGTTC CCAAACCCTCAAACCCCGTGATCGAATTGTTAAGAAGCTTGCTCACTTTGGAGTTCCTGAGGAGCAGCTTGACCAGCCTGGTTTGGTTGCTTTTGTTAAG GATAAGAGGGAGTTGATACCTGAGCTGGTGTCTGTTATATTGCCTACTGATGTGGAAGTGGGTGAAGCATTGCCGGATTCTAAATCGGGCTCGAAGAAAT TGCCGTTGGGTGTTACTATGAAGAAGACTTTCCGTCATAGCATGGTGTGGTTGCAGTGGCTAATGTTTGAGGGTGATCCTGGTGCTGCCCTGAAAGGCCT TTCTGAGATGTCTGTTGGGCAGAGGGGTGTGTGTGGGGATGTTTGGGGACATAATGATATAGCTTACAGGTGCAGGACCTGTGAGCACGATGGGACTTGT GCAATTTGTGTTCCTTGTTTTGAAAATGGGGATCACAAGGGCCATGATTACTTTGTTATATACACAGGTGGTGGGTGTTGTGATTGTGGGGATGTGACGG CGTGGCAACGCAAGGGTTTCTGCTCGAAGCATAAGGGTGTCGAGCAGATACAGCCTCTTCCAGAGGAATTATCAAACTCTGTTGCACCTGTGCTTGGTTC TCTATTTATTTGTTGGAATGCCAGACTAAAGTTTGCAAGTGATTCTGCCATGTCTGCAGAAAGAAAGAAGGCTGGAAATGAGCTAACTTTTGCTGTAGTT GATATGCTTTTAGAATTTTGCAAGCATAGTGAGAGTTTGCTAAGTTTTGTTGCTAGGTCATTGTTCTCTTCTACTGGTTTATTGAACATCCTAGTGAGAG CTGAGAGGTTTTTAGCTGATGTTGTTATAAGGAAACTCAATGAGCTACTCTTGAAATTATTGGGTGAACCTATTTTTAAGTATGAGTTTGCCAAGGTTTT TCTCGCTTACTATCCAACTGTTGTAAATGAAGCCATAGAAGAGTGCAGTGACCAACCTCTAAAGAAGTACCCTCTGCTGTCCACATTCTCCGTGCAAATA CTTACAGTGCCCACCCTTACCCCACGTCTTGTGAAGGAAATCAACCTACTAGCCATGCAGTTGGGATGTTTAGAGAAAATTTTCAATTCTTGTTCAGAGA ATGGTCGCTTGCAGATTTCCAACTGGGCAAATTTGTATGAGACAACAATATGTGTTGTCAAAGATATTCGTTTTGTTATGAGCCATGTGGTGGTGCCCAA ATATGTAACCAATGACCAGCAGGATATCTCAAGAACATGGATGAGACTCCTGTCCTTTGTGCAAGGGATGAACCCTTCGAAGCGAGAAACAGGTCAGCAT ATAGAAGAAGAAACTGAAAATGTCCATTTGCCTTTTGTTTTAGGCGACTCTATTGCCAATATTCATTCTCTATTGGTGGGTGGGGCATTTTCTGATTCCA GCAAGGGAGGGATGGAGGATGAAATTGTTTGGATCTCAGAAAAGCATGAAACAGATGATGGAGATAATGTAAGAAATACGAAGGTAGGGCGGCTATCCCA GGAAAGCTCTGCATGTTGCGTAACAAGTAATAACAGCGCCTTTGCTTCACCAAAGGTTCCTGAGATAGAATCTGATGCCTCTTCTCCTTTTGATCTTCCA CATTCTGTCACTTGGTTGATATATGAGTGTTTAAGGGCTATTGAGCATTGGTTGGAAGTTGAGAATACCCCAGGTTCACTTCCTAACATGTTTAACAGTG ATAGTGTCTATGATGGCAATTATTCAGCATTTAAGAGAACAATATCTAATTTCAGAAAGGGTAAATATACTTTTGGTAAGCTTGCAAGTTCAAGCGAAGA CTATGGTAAGCGATGCTCTGATTTCAGTCTTGATGGCTCGGAAATGGGTAAAAATATAGTGAAGGATGGTAAACTGAAAACAAATGGTGAAATTGATTCT GAAAACACCAGCACTTATCTTGGTTTTGATAATAATGCAACGGAAGAGGATTTTCCTGCAGAATCAGATTGTCTACGTTTTTTATCGTCACCTGATTGGC CACATATTGTCTATGATGTTAGTTCACAAGATATATCTCTACACATTCCATTACATAGATTACTATCTATGTTGTTACAGAAGGCACTAGTAATATATTT TAATGAATCCAAAGTGCATGATGTGACCGATGATTGTTCTACTAACTCATTGTCAACAATCCGCGTTGACTTCTTCGGACGTGCTTTACGTGGAACTCAT CCTCATGGTTTCTCTTCCTTTATAATGGAGCATCCACTGCGGATTAGAGTATTTTGTGCTGAAGTTCATGCTGGAATGTGGCGAAAAAATGGAGATGCTG CTTTACTATCTTATGAATGGTATAGATCAGTACGCTGGTCTGAACAAGGTCTGGAGCTTGATCTATTTCTTCTTCAGTGTTGTGCTGCATTTGCTCCAGA AGATCAATATGTCAGTAGAATTCTAGATCGCTTTGGATTATCAAACTACTTGTCTCTGAATCTTGAACGGTCTAGCGAGTATGAACCTGTTTTAGCTCAG GAAATGCTTACTCTTATTATTCAGATAGTAAAAGAAAGGCGCTTTTGTGGGCTAACTACTGCTGAAAGTTTGAAAAGAGAACTAATTTATAAGTTAGCCA TTGGAGATGCTACTCATAGTCAATTAGTAAAGTCTCTTCCTCGTGATCTCTCCAAGTTTGAACAGCTTCAAGACATTTTGGATACTGTTGCTGTTTATTC TAATCCATCTGGCTTTAATCAGGGCATGTATTCTCTGAGGTGGCCATTTTGGAAAGAATTGGATTTGTATCATCCTCGTTGGAACTCGAAGGATTTACAA GTTGCTGAAGAAAGATACGTACGTTTCTGTGGTGGCTCTGCATTAACTACTCAGTTGCCCCGGTGGACCAACATTCATCCTCCTCTGAAGGGGATAGCCA GAATAGCCACCTGCAAAGTTGTTATGCAGATTATCCGTGCAGTACTATTCTATGCTGTTTTTACTTTTCAATCAGCTGAGTCTCGTGCTCCTGATGATGT TCTTTTACCTGCACTGCATTTGCTATCATTATCATTAGATATATGCTTTCAGCAAAAAGAATCTAGTGAGAATATATATCATGATGTGGCACAAATTCCT ATAATAGCCTACTCTGTAGAAATTATTGATGCAAATGCTTTTTATGGTGTTGGCGAACAAAGCTTGTTGTCTCTTCTTGTTGTGTTGATGGAAATGAACA GGAAGGAAACTGCAGACAACTTTGTAGAAGCAGGTGGTTTCAGTGTGTCATCTTTAATTGAAAGTTTACTGAAGAAATTTGCCGAGATTGACCACAGGTG CATGACTAAGTTGCAAAAACTTGCCCCTGAAGTTGTGAGTCATATTTCTGAACGCTGTCCAACTAGAGACTTAAGTGTCTCATTTTCAGCTTCTGATAGT GAGAAACGCAAAGCAAAAGCTCGAGAGAGGCAGGCTGCAATAATGGAAAAGATGAGAGCCCAGCAAACAAAGTTTTTGGCCAGCATTGATTCCACTGTTG CTAATAGTTCTCAAGTTGGTCATCAAGAAGGTGATTTTGACACTGATGCTGAAGAATCTAAACAAGTTGTTTGCTCTCTATGCCATGACCACAGTTCAGA ACATCCAATTTCATTTTTGGTTCTTCTTCAGAAATCTAGGCTTGTGAGTTCTGTTGACAAGGGTCCCCCATCTTGGGACCAACTTTGCCGATCAGATAAA CAACACATGCCTACCACCACTAAGATGACAGATACATCGGTTATAAACTTGACCTCAAGTAGTTCAGGATCAACTTCATCTTCCCACTTAACTCAGTTAG TTCAGATTGCTGCCAATGAACTAGCTTCTAGTGGGGATCCTGGGGAAGTTAATGCTTTTCTGCAATATGTCAAGAATCAGTTCCCATCTTTGGGAAATTT TCAGCTCCTAGACACATCTATTGATGAAAAAGAAAAGACACCATATACTTTTGACAATTTAGAACATGGTATGTACTTCTCCATTCGGGAGGAAATGCGT GATCTTGCGATGTCCTCAAATATGATGAATGAGGATGAGAAAGTTCCAACAACCGGAGGGGATACAAATACTATAATAGATACCGAATCTGTATTGCTCG GGAAATATACTGGTGATCTTGTGAGAGAGATGTCAGAAAGCTCTTCCGCATCTGAAATTGCTTGTACTGAGAATACTTATGTCGAATCGACAACACAGCA TCCATCATATGATGGATTTGGCCCTACAGATTGTGATGGAGTTCATCTTTCTTCATGTGGGCATGCAGTACATCAAGGGTGTCTTGACCGATATTTGTCT TCATTAAAAGAAAGATTTGTCAGAAGAATTGTTTTCGAAGGAGGACATATTGTTGACCCTGATCAGGGAGAGTTCCTCTGCCCAGTGTGTCGACGACTTG TAAATTGTGTCCTGCCTAATTTACCTGGAGAATTACAGAAGTCTTCGAAGCTGTCTATTGGCTTAGCCATTGGTTCAATACATACAGCAGTCCCTTCAGC TGAATCTAGTGAAGTGACTTATTCACTCCGCCTTCAGCAAGCTTTGAACCTCTTGCGATCTGCTGCCAGTACAGTTGGGAAAGATAAATTCCTGAAAGCA ATTCCTTTGCGGCAGATTGATAGCACTAGACCAAATCTTGAAACTTTCTCCCGGGTGCTTTCTAACATATATTTCCCAGGTAAACAAGATAAGTTATCAA AATTTGCCAGATTAAATCACTCAATGCTGATGTGGGACACTCTTAAGTACTCCTTGATGTCAATGGAGATTGCTGC
• Tissue: flowers
• Gene name: LI_gene_82466;
• Additional information: details;

Expression of Ll_transcript_147079

FPKM

• FPAB: 0.7
• FPNAB: 1.1
• LF1: 1.8
• LF2: 1
• LF3: 1.6
• LF4: 0.6
• UF1: 0.5
• UF2: 1.1
• UF3: 1.3
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_147079

• Blastp: E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 48.88% of identity
• Blastx: E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 48.45% of identity
• Eggnog: Ubiquitin protein ligase E3 component n-recognin 3(ENOG410XRM3)
• Kegg: Link to kegg annotations (AT5G02310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412985.1)
• Pfam: Putative zinc finger in N-recognin (UBR box) (PF02207.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;