| Id Trinity | FTRINITY_DN59057_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_147097 |
| Sequence | TTATCATTGACTCTCGGACAAAAAAAATCGGATAAGATTTTAAAGTCATGACAAAAAATGGTGGATGAATGAATGCAGAAGAGAAGAAAAACGAGTGTAA CAGCTATATATCATCTTCATACGTTTACAATGGGCTAGTTTCTCAAATCAATTTTTTTTGAGAATTTTGGTTAATCCAATTAGGGTTTCCAAAAGTGTTC TTCTTTTTATATTTTACTATAAATTCATAATCGAATTAGCTTTTTCTCTTATCGGAATCAACAACGCTGGGGAGTGAAGAATCTGATTTAGGTCCTCGCT CTCTTTTTTTCTTCTCTCGCTTTTGGAACTCTCTTATGAACGATAACATGGAAGTCGATTTACCCTCTGATTCTCTATCACTCAAGCCCCGTGATCGAAT TATTAGGAGGCTTGCTCAGTTTGGAGTTCCTGAGGAGCAGCTTGACCAGCCTGGTTTGGTTGCTTTTGTTAAGGATAAGAGGGAGCTGATACCTGAGCTG GTGTCTGTCATATTGCCTACAGATGTGGAAGTGGGTGAAGCATTGCCAAATTCTAAGTCGGGCTCGAAGAAATTGCCTTTGGGTCTTACTATGAAGAAGA CTTTCCGTCAGAGCATGTTGTGGTTGCAGTGGTTGATGTTTGAGGGTGACCCAGGTGCTGCCCTGAAAGGCCTTTCCGAGATGTCTGTTGGGCAGAGGGG TGTGTGTGGGGCAGTTTGGGGACATAATGATATAGCTTACAGGTGCAGGACATGTGAACATGATCCAACTTGTGCAATTTGTGTTCCTTGTTTTGAGAAC GGGGAGCACAAGGGCCACGATTACAGTGTTATATACACTGGTGGTGGGTGTTGTGATTGTGGGGATGTGACAGCATGGAAGCGTGAGGGTTTCTGCTCGA AGCATAAGGGTGTCGAGCAGGTACAACCCCTTCCAGAGGACTTGTCAAAATCCGTTGCGCCTGTGCTTGGTTCCCTGTTTATTTGTTGGAATGACAGACT AAAGCTTGCGAGCGATTCTGCAATGTCCGCAGAAAGAAAGAAGGCTGCAAATGAACTAACTTTTGCTGTAGTTGATATGCTTTTAGAATTTTGCAAGCAT AGTGAGAGTTTGCTCATTTTTGTTGCTAGGTCATTGTTCTCTTGTACTGATTTATTGAACATTCTGGTGAGAGCTGAAAGGTTTTTAAGTGATGTTGTTA TAAGGAAACTCCATGAGCTACTCCTGAAGTTGTTGGGAGAACCTAATTATAAGTACGAGTTTGCCAAGGTTTTTCTCGCTTACTATCCAACTGTTATAAA TGAAGCCATAGAAGAGTTCAGTGACAATCCTCTGAAGAAGTACCCACTACTTTGCATGTTCTCTGTGCAAATACTTACAGTGCCCACCCTCACCCTACGT CTAGTGAAGGAAATCGACCTACTAACCATGCTGTTGGGATGTTTTGAAAAAATTATAAATTCTTGTGCTGAAGATGGACACTTGCAGATTTCCAGGTGGT CAAATTTATATGATACAACAATACGTGTTGTTGAAGATATTCGTTTTGTTATGAGCCATGTGGTAGTGCCCAAATATGTAACCAATAACCATAAAGATAT CTCAAGAATGTGGTTGAGACTCCTGTCCATTGTGCAAGGGATGAGCCCGCAAAAGAGAGAAACAGGTCAGCATGTAGAAGAAGAAAATGAGAATGTCCAC TTGCCTTTTGTTTTAGACCACTCTATTGCAAATATTCATTCTCTATTAGTGGATGGGGCATTTTCTGATTCTAGCAAGGGAGAGATGGAGGATGAAATTG TTTCGAGCTCAAAAACACATGAATCAGATGATGGAGATAACCTAAGACATGCGAAGGTAGGGAGGCTATCCGAAGAAAGCTCTGCATGTTTTGTGACCAG TAGGAACAGTGCCTTTTCTTCACCAGAGGTTCCTGAGACAAATTCCAATGCCTCTTCTCATCTTCATATTCCACATCCTGTCACGTGGTTGATATATGAG TGTTTAAGGACTATTGAGCATTGGCTGGGAGTTGAGAGTAACCCAGATGCACTTCCTAACAAGTTTAACAGTGGTAGTGTCAATGATGGCAATTTTTCAG CATTTAAGAGAACAATTTCTAATTTCAGAAGAGGTAAATATACTTTCGGTAAGCTTGCAAGTTCAAGTGGTGGCTTGGACATGAGTAAGAATGCATTGAA GGATGGTAGTGTGAAAGCAGATGGTGAAATTAATTCAGAAAACAGTGGCACTCGTCTTGGTTTTGATGATAATGCAATGGATGAGGATTTTCCCACAGAA TTAGATGGTCTGCGTATTCTATCATTGCCTGATTGGCCAAAGATTGTCTATGATGTTAGTTCACAAGAAATATCTCTACATATTCCATTACATAGATTGC TATCCATGCTGTTACAAAAGGCACTGAGAAGATATTTTAATGACTCTCAAGTGCCAGATGTGACTGATGTTTGCTTTACCAACTCATTGTCAACAATCTA CACTGATTTCTTTGGACTTGCTTTACATGGAAGTCATCCTTATGGTTTCTCTGCCTTTATAATGGAGCATCCACTGCGGATTAGAGTATTTTGTGCTGAA GTTCATGCTGGAATGTGGCGAAAAAATGGAGATGCTGCTTTACTATCTTATGAATGGTACAGATCAGTTCGCTGGTCTGAACAAGGTCTGGAGCTTGATC TATTTCTTCTTCAGTGTTGTGCTGCATTGGCTCCAGAAGATGAATATGTCAGCAGAATTCTAGATCGCTTTGGATTGTCAAACTACTTGTCTCTGAATCT TGAGCGGTCTAGCGAATATGAACCTGTTTTAGTCCAGGAAATGCTTACTCTTATTATTCAGATAGTAAAAGAAAGGCGCTTTTGTGGGCTAACTACTGCT GAAAGTTTGAAAAGAGAACTAATTTATAAGTTAGCCGTTGGAGATGCTACTCACAGTCAATTAGTGAAGTCCCTTCCTCGTGATCTCTCCAAGTTTGAAC AGCTTCAAGACATTTTGGATACTGTTGCTGTTTATTCTAATCCGTCTGGCTTTAATCAGGGTATGTATTCTCTGAGATGGCCATTCTGGAAAGAATTGGA TTTGTATCATCCACGATGGAACTCAAAGGATTTACAAGTTGCCGAAGAAAGATACGCACGCTTCTGTGGTGGCTCTGCATTAACTACTCAGTTGCCCCAA TGGACCAAAATTCATCCTCCCCTGAAGGGGATAGCTGGAATAGCCACCTGCAAAGTTGTTTTACAGATAATCCGTGCCGTCCTATTTTATGCTGTTTTCA CTTTTAAATCTGCTGAATCTCGTGCTCCTGATGGTGTTCTCTTACCTGCACTGCATTAGCTATCATTATCATTAGATATATGTTTTCAGCATAAAGAATC TAGTGAGAATACATGTCATAGTGTAGCACAGACTCCTATAATTGCCTCCTCTCTAGAAATAATTGATGCAGATGCTTTTGACGGTGTTGGTGAACAAAGC TTGTTGTCACTCCTTGTTGTGTTGATGGAAATGAACAAGAAGGAGACTGTAGACAACTTTGTAGAAGCAGGTGGTTTCAGTGTATCTGCTTTAATTGAAA GTTTACTGAAGAAATTTGCTGAAATTGACAACAGGTGCTTGACTAAGTTGCAAAAACTGGCCCCTGAAGTTGTGAGCAATATTTCTGGACGCAGTCCAAC TAGAGACTCAGGAGTCTCATTTTCAGCTTCTGATAGTGAGAGACGCAAGGCAAAAGCTCGAGAGAGGCAGGCTGCAATAATGGCAAAGATGAGAGCCCAG CAAACAAATTTTTTGGCGAGCATTGATTCCACTGTTGACTCTAGTTCTCAAGTTGATCACGAAGAAGGTGACTTAGACACCACTGAAAACGAGGCTGAAG AATCTAAACAAGTTGTTTGCTCTCTATGCCATGACCACAGTTCAGAACATCCAATTTCATTTTTGGTCCTTCTTCAGAAATCTAGGCTTGTGAGGTCTGT TGACAGGGGTCCCCCATCATGGGCTCAAATTTGCCGATCAGATAAAGAACAGATGCCTACCACCACCAAGGTAACAGCTACATCGGCTATGAACTGGAAC TCGGGTAGTTCAGGATCAACTTCATCTTCCCACTTAACTCAGTTAGTTCAGATTGCTGCCAATGAACTAGCTTCTAGTGGGCATCCTGGGGAAGTTAGCG CTTTTCTGCAATATGTCAAGAATCAGTTCCCATCTTTGGGAAATTTTCAACTCCCAGACACATCTTATGATGAAAAAGACAAGACACCATATACTTTTGA CACTTTAGAACAGAGTATGTACTTCTCCATTCGTGACGAAATGCATGATTTTGCGTTGTCTTCAGATTTGATGAATGAGGATGAGAAATTTCCAACAACT GGAGGGAATTCAAATATTATAAAAGATACTGGATCTGTGGTGTCCGGGAAATGTTCAAGTGATCTTATGAGAGAGATGTTAGAAAAATCTTCTGCATCTG AAATTGCTTGTGAGAATGCTTCTGTTGAATCAGCATCACAGCATCAAGTATATGATGGATTTGGCCCTATAGATTGTGATGGAGTTCATCTTTCTTCATG TGGGCATGCAGTACATCAAGGGTGTCTTGACCGATATTTGTCTTCATTAAAAGAAAGATTTGTCAGAAGAATTGTTTTTGAAGGAGGACATATTGCTGAC CCCGATCAGGGAGAGTTCCTCTGCCCAGTGTGTCGCCGACTTGTAAATTGTGTCATGCCGACTTTACCTGGAGAATTACAGAAGTCTTTTGAGCAGTCTA TTGGCTTAAACATTGGTTCAATACATACAGAAGCCCCTTTAGGTGCATCGAGTGAAGTGACCTATTCACTCCGCCTTAAACAAGCTTTAAAGCTCTTGGA ATCTGCTGCCAGTACAGTTGGGAAAGATAAATTCCTGAAAGCCATTCCTTTGCAGCAGATTGATAGAACTAGACCAAATCTTGAAACTTTCTCCCGGGTG CTTTCTAAAATGTATTTCCCAGGCAAACAAGATGAGTTATCAAGATTTGCCAGATTAAACCACTCAATGATGATGTGGGACACTCTTAAGTACTCCTTGA TGTCAATGGAGATTGCTGCACGTTGTGGAAGGACTTCTTTGACACCAAACTTTGCTCTTAGTGCCATGTATGATGAACTCAAATCTTCGAGCGGCTTTAT ATTATCCTTGTTACTGAAACTTGTTCAAAAGACAGGGAGTAAGAACTCTCTTCATGTGCTTCAAAGATTCAGAGGTGTTCAGCTCTTTGCGGAATCAATT TGTTCAGGGATTTCCCTGCATCCTGCAAGTAATGACATGTCCGGTAGAGGTGATATGTTGTCTATCTTAAAGCGTATTGGAAACGACATCTCAGACATCG ACAAACGCTTTTGGAAACAGGCTTCAGATCCGATACTTGCTCATGACCCTTTCTCAACATTGATGTGGATTCTCTTTTGTCTACCATACCCAATTTTGTC ATGTGAAGAGTACTTGTTATCCCTTGTGCATGTTTTCTATATAGTAGCTGTAACCCAGGCCATAATTTTGTATTATGAGAAATCTCAGCCTAAACCAAGT GAATCAGGCCTTTCAAATTGCCTGATTACTGACATATATAAAGTTATCAGTGAATCTGGATGTCGTCAGCAGTGCTTTGTGTCAAACTATTTTGATCCTA ATGTTGATATTAAAAATGTAATTAGGAGGTTTAGTTTCCCTTACTTGCGAAGATGTGCGTTGTTATGGAAAATACTATTTTCCTCTATCCCGGCACCTTT CTCTGATGAAGAAAATATGGTGGATAAATCATGGAATGCCCCAAATGACACAATGGACCGGGCTAATATTGAACTGTTTGAGGTCACCAAAATTGAAGAG CTTGAGCATATGTTTAAAATTCCCTCTCTTGATGTGGTTCTAAAGGATGAAGTTTCAAGATCTTCAGTTGCTATTTGGTGTCGTCGTTTTTTCAAGCAAT CTGATTCTCATGGTATTCAGCGTAATTTGTATGTAACACCTGCAGTTCCATTTGAACTGATGAGATTACCAAATGTTTATCAGGATCTTTTGAGGAGGTG TATCAAACAGCGATGCCCTGAATGTGAATCAATTGTTCATGAGCCTGCATTATGCCTGCTGTGTGGTAGATTGTGTTCTCCAAGTTGGAAATCATGCTGC AGGGCAAGTGGCTGTCAAACTCATGCAGCAACCTGTGGAGCTGGCACTGGAGTGTTTCTGTTGATTAGGAGAACAACAATCCTACTACAGAGATCTGCAC GTCAGGCTCCCTGGCCTTCTCCCTATCTGGATGCTTTTGGTGAGGAGGATTCCGAGATGAGTCGGGGCAAGCCTCTTTACCTGAATGAGGAACGTTATGC TGCTCTGACCTATATGGTTGCTTCTCATGGTCTTGATCGTAGTTCCAAGGTTCTTGGCCAGACTACTCTCGGTAACTTCTTCCTGATTTAGTTCAACATT TACATGTTGAGTAATAATGTCAAGAAATTTAGTGAACAGATCTCCGGAAGGTCGGAATTGGTTCTGGAAATGCTAATGTATTATGCATATATATGACTAA TAAAAAAATCCTAGTCCAAACTGTCTGTCATTCAGGTTTGCATGCTGTAAGCACTTTTTTTGTTCTTGTCGAATGTCTTAATTTTATTGCTATTGGAAGG TTGTTTTCTACTTCTTGGATGATTGGATCTAGGTATTCAATTGCATCCTGTAAAAACTTGCGAAGTTATAATCAAATCTCTACTCACTATTCGGCATAAT TTTACTATGGTTTCAGTAGTATTTCAGTAAAAGCTATTTCATTTACCCATAAACCACATCCTATTTACAAATTCTTTAGTTTTCGGCATTGAACTTCATC TTAATATCCCTTCATATATGCTTTGTCATCCTTTTCTATTCGTTAAACTGTCCTGGACGAAGACTGACTATGATTGATTGATTCCAATAACCCATTAATT CTTGTTGCATCCCCTCCTAGGAATCTAGATTTGATTGTCTATTATGATTTTTTACTGTCAAAGTTCTCGAGGGACATGTCGGTCGAACGCTTCCCTTGTT GGCTTAGAGGAGGTTTACATGGAGCAACAACTTGAGTTTGTTGCTTAGGATGTGGGGTTTAGTTTAAAGAGTGGAGACTTTTTTATGGCCCCAAGTCATT CAAATCAGAAATCTATTTTTTTTTCCAAATTCCATATATTTGAACATGCACAATTCTTGTGTTTATTTAGCCTTATACTTGTTTTGGTATCATAAATCCC TGCATGCAGTTCTCTGAAACAATCACCTGATTTATGCTTTTTATTGAATACTGAAGCAAAATATTGAGATTCTATTGATTTATACTCAACAATAGTTTCT CTTTTCACATCAGCAGATTGATACAGTAGCTGCAATAATAGAAGTTGTCTCATATGGAAAAATCTACCTGCTGGCCATGGTGTACAGTTTTTCACAACAA TGCTAACATAGCAACAAGCTTTCTTTGGCTTCATGCCATAAGGCAAGTCTTCTATGAAATAGGTGTATAGTTGTGTGTATATATATATATATAAGAGCAA TTTCTTTGTGGTTCATTTTGATGAATAATGTTCTTGATTATGTTTGAGAAGACAACTATGTTGGTTCTTTTATTTTTCACTTTCCATCTTTATACATATA TTTTACTGTCAATATTTTGGATTGCTTTTTAATATATTTGTGAATGCTTATAGACTCAAAAAAATTTGGGATGTTCTTTACTTTTTATTCTCAACCATGA TGGCTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82466; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_147097
| Blastp | E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 54.31% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase PRT6 from Arabidopsis with 49.81% of identity |
| Eggnog | Ubiquitin protein ligase E3 component n-recognin 3(ENOG410XRM3) |
| Kegg | Link to kegg annotations (AT5G02310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450222.1) |
| Pfam | Putative zinc finger in N-recognin (UBR box) (PF02207.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |