Ll_transcript_144930

• Id Trinity: FTRINITY_DN59058_c0_g2_i17
• Name Transcript: Ll_transcript_144930
• Sequence: TCACAATGCAAAATCTTTCTCCTTCACTTAGAAACTCTCAACTCCCTATTCCTTCGTTTTATTGCATTCTCTGATTCGCACTGTGATTATTCTCTCTCTC TCTCTCTCACTCTTTCTGTCGTTTTTTCAATCCTTTTGCGTTTCGTAACTGTTCCCATTCATGGCCAAGGGCGTAATCTCAGACGACGAAGATGAGGTTG AACTCGACGAGGAGGAGAGGGAACCGGTCGAGGGGGATGGATTAGATGAGGGTCGCGATGTGGACGATGATGAAGATGAAGAAGAAGAAGGGCAGGATGA ATATGAAAATGATGGATTTATAGTTGATGGGGATGAAGAGGAGCAGGATGAAGAAGAGAGAGCAGAAAGTGATGAAGAACGCCACAAGAGGAGAAAGAAG AAGAGAAAGGAGGAATATATTCTTGATGAAGATGATTATGAGCTTCTGGAAGACAATAACATCAATATTCATCGCCGGAAGGACATTAAAAAGTTCAAGC GGCTGAAAAAAGGCCAGAGGGATACTGAGGAGGAACCATCTGGGCTATCTGATGAGGAGGATTTTGTTGGAAGTGGTAAAGTTGGGAGAACTGCTGAGGA GAAGCTTAAACACCGTTTATTTGGTGATGAAGAAGCTTTACTTGAGGATATTGTTGAAGAGGAGGAACAAGGAGAAGAGGAGGAGGATGCAGACATTGGA GAAGATGATGAAATGGCTGACTTCATTGTGGATGAAGAAGAAATTGATGAGAATGGAGCTGCTATGAGGCGAAGGAAGCCGAAGAGAAAGAAAACTAGGC AGGCACCTGGAGTCTCTTCCTCAGCTGTGCAAGAAGCTCAAGATTTATTTGGTGATGTTGAAGAGTTGCTGCAGACTCGCAAGAAAAATCTAGAGCTACA TGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCTATTATTATTTCTGAGAAGTATATGACAGAGAAGGATGACGTGATTAGGGAGGTTGATCTT CCAGAGAGAATGCAGATATCTGAGGAGAGTACTGGTACTCCTCCACTGGATGGAAGTATAGATGAAGAGAGCCAGTGGATAGTTAAGCAACTTAGTGAAG GAGCAGTCCCTTGGATTTGCAAAAAAATTTCTACGCCCCAAAATAATAGAAAGAACCTACCAATTGACGAGAATGATATTATCAGATTTTTGGAACTGTA TCATGTGCAAAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAAGAGTGCTTAAGCCTGTTGAAAGACCTAGAGCGACCCGAAGCTGGAGGTGAG AGTTCGGATAAGAATAACATGACACCTACTCTAAAGTGGCACAAGGTGCTTTGGGCTCTTCTGGACTTGGACAGAAAGTGGTTGCTTCTTCAGAAGCGGA AGGGTGCCTTAGAGTCATACTATACTAAACGGTTTGAAGAGGAGTCCCGGCGTATTTATGATGAAACAAGACTAAACTTGAACCGGCAATTATTTGAATC AGTTATGAGATCATTGAAGGATGCAGAATCTGAGAGGGAGGTCGATGATGTTGACTCCAAGTTCAACTTGCATTTCCCACCAGGTGAGGCTGGTGTTGAT GAAGGACAGTACAAGAGGCCAAAAAGGAAGTCAGTATATAGCACTTACTGTAAGGCAGGCCTGTGGGAGGTTGCGAACAGGTTTGGATGTAGTTCTGAGC AGCTTGGAATATGTCTATCTGAAGTTAAGGTGCCTGAGTTGGTAGACCCAAAGGAAACACCAGAGGAGATGGCTTCAAACTTTACATGTGCTATGTATAA TACCCCTGAAGAAGTACTTAAGTGTGCTAGGCACATGGCAGCTATTGAGGTAAGTTGCGAGCCTAGCATTAGGAAACATGTTCGTAGCCACTTTCTTGAT CATGCTGTGGTGTCAACATGTCCTACTGCTGATGGGAATGTGGCAATAGATTCTTTTCATGACTTCGCTGTGGTAAAGTGGCTCCGAGAGAAGCCTCTGT CTAAATTTGACGATGCACAGTGGCTTCTTATACAGAAGGCAGAAGAGGAGAAACTTCTTCAAGTCACTATTAAGCTTCCTGAAGAGAATCTTAATAAATT AATTGACCAATTCAATGAGTATTATGTTAGCGATAGTGTTAGCAGATCTGCTCAGCTGTGGAATGAACAGAGGAAGTTGATACTGAAAGATGCAATTTTT CGCCTTCTTTTACCATCAATGGACAAAGAGGCAAGAGGTGTATTGGCAAGCAAAGCAAAGAATTGGCTACTTATGGAGTACGGGAATGCCTTGTGGAATA AGGTTTCTGTGGGACCTTATCAACAGAAGGAGAATGATCTTAGCTCTGATGATGAGGCTGCTCCTAGGGTTATGGCCTGCTGTTGGGGCCCTGGAAAGCC GCAAACAACATTTGTTATGTTGGATTCATCAGGGGAAGTGCTAGATGTGCTTTACACTGGATCCCTTACTTTAAGGTCACAGAATCCTAGTGACCAACAA CGGAAGAAAAATGACCAGGAACGTGTTTTGAAGTTTATGACAGATCACCAACCACATGTTGTCGTTTTAGGTGCAGTAAATTTGTCTTGCACTCGTTTAA AGGAAGATCTATATGAGGTCATTTTTAAGATGGTAGAGGAAAACCCTAGGGATGTTGGGCATGAAATGGACGGGCTCAGCGTTGTGTATGGAGATGAATC TCTTCCCCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAACTTCCTTCCCAGCAAGGTATAGTCAGGCGGGCTGCTGCTCTTGGCCGATATCTCCAG AACCCACTGGCAATGGTTGCAACCTTATGTGGACCCAGAAGGGAAATATTATCATGGAAACTGAACTCTTTGGAGAGCTTTCTCAACCCAGATGATAAAT TTGGAATGGTTGAGCAGGTTATGGTAGATGTGACCAATCAGGTTGGTTTAGACATTAATTTAGCAATAAGTCACGAGTGGTTATTTTCTCCTTTACAATT TATTTCTGGGCTTGGTCCACGTAAGGCTGCATCCTTACAGAGATCCTTGGTAAGAGCTGGTGCAATTTTTACCAGGAAGGATTTTTTGAAAAAACATAAG CTGGAGAAAAAGGTTTTTGTCAATGCAGTTGGTTTCTTGCGTATCCGGCGAAGTGGGTTGGCTGCTAGCAGCAGTGAATATATTGATTTGCTGGATGATA CAAGAATTCATCCAGAATCATATGTTATTGCACAAGAGTTGGCCAAAGATGTGTATGAGGAGGATGGCACAGGTGATGGAAATGATGATGATGATGCATT GGATTTGGCAATAGAGCATGTTAGAGAAAGACCTAGTTATTTGAAAAACCTTGATGTTGTGGAATATGCTACTGCGAAAGAAGAACAAAAAAAGAAACAA CCGTCAATTGTTATTAATCTTCTGAAGAAAATAGAAACTTTGCATGACATTAAGAGTGAATTGATTCAAGGTTTTCAGGATTGGCGTAAGCAATATGAAG AACCAAGTCAAGATGAGGAATTCTATATGATTTCAGGTGAGACTGAGGAGACTCTTGCTGAAGGTAAAATTGTCCAAGCCACAGTTCGCAGAGTGCAGGC CCAGAAAGCAATATGTGGGCTTGACTCTGGAATGACTGGAATCCTGATGAAAGAAGACTATTCAGATGAATATAGAGATATAATTGAATTATCTGATAGG CTACATGAAGGCGACATGCTCACTTGTAAAGTCAAGTCAATTCAGAAAAATAGGTATCAAGTCTTCCTTGTTTGTAAGGATAGTGAAATGAGAAGTAACC GGCTACATAATAGCCGTGATCTTGACCCTTATTACTATGAAGGTCGAACCTGTTTGCAGAGTGAACAAGATAAAGCTCGGAAAGAAAAAGAGCTTGCAAA GAAGCATTTCAAGTCAAGGATGATTATTCATCCCCGCTTTCAGAACATAACTGCAGATGAAGCAATGGAGTTTTTATCAGGCAAAGATCTTGGGGATAGC ATTGTCCGCCCTAGCTCACGTGGACCAGAGTGTCTTACTTTAACTCTCAAAATCCATGATGGGGTATATGCACACAAGGAAATTGTCGAAGGTGGAAAGG AACGCAAGGACATTACTAGCTTACTTCGAATTGGGAAGACGCTAAAAATTGGAGATGACACTTTCGAGGATTTAGATGAGGTTATGGACCGTTATGTTGA TCCCTTGGTGACTCACTTGAAGGAAATGTTAAACTATCGCAAGTTTAGAAGGGGTACAAAATCTGAAATAGATGAACTTTTGAGGATAGAAAAAGTTGAA AATCCTCTGCGCATAGTCTACAGTTTTGGCATCTTGCATGAACATCCCGGGACATTTATACTAACTTATATAAGAAGTACGAATCCACACCATGAGTATA TTGGGCTTCATCCAAAGGGATTCAGGTTCCGAAAAAAGATGTTTGAGGACATTGATAGGCTTGTGGCTTATTTTCAGAGGCATATTGATGATCCTCAACA TGATTCCACTCCCTCCCTTAGATCTGTTGCTGCTATGGTACCAATGCGAAGTCCTGCAGCTGGTGGCTCATCAAGGGCATCTGGGGGTAGTGGCTGGGGT AGTTCAAACAACGAAGGTGGCCGGAGAGGCGACTCTTATGCTAGGGATCGATCTTCTACTCCTGGTTCCAGGACAGGACGGTCTGATTACAGAAACAATG GGAATCTAGATGAACACCCCAGTGGACTGCCTCGTCCATATGGTGGTGGACGTGGCCGTGACCGTGGTTCTTATAACAATGATAGCAGAGGACATGGCTC CAATAATGAAAGAGAGGGCAGAAGGGTTTCTAATACAAGGGATGGGGATGATGGTTTAAGCAATTTTCCTGGGGCTAAGGTTCAAAATTCCCCGGGTAGG GAAGCTTTTCCTGGTGGTTGGGGTGGAAGTGGTGGAGGCAGTGATTGGGGAGGTGGAGCTGGTACAAGTGACAATGGTGGCCGGGGAGGTGGTGCTGGTG CTGGTTAAGGTTAAGATGATGCTGAACGTTTTTGTTCTTTCCCAAATTTCCTGGATTTGTTTGCCAGCTGGTTTTTAGTGGGGAGGGGAATGAAGGGAAA GGCATTTGAGAGCCATCTCATTATATTTCATAGCTCCAAGGCCCTTCCCTTCCCTATTGTCCGATAAAATTCAACTTGCAAACAGACCCTTAGAAATGCT GGTAATGGATGGAAGGATTATTAGAATCTTATTGAGTGAACATGGATGCCTGAATATAGTTTGCAGAGCACGATAAAAGGAAGAGAAATTGCATGCTACT GGGTGAAGAAAGATGCCTCCCCTGCATGCATCCCTTACAATCCAAGAAACACAAATATATGTAATGTCAGGATACATTTCTGTCTTCTCAGAATAATAAT TACTTTTTTGACAAATTAATTGTCATTTATCTTAATTATTTTCAATTCGATCTCATAAGATTATTTGTGGCAAATTAGTCTCTAAAATCAGTGAACGTTA GCTTAGTTAATCATTTGGTTGACTCTTCCTTTGAATAACTATCATTTGTTCTCTCTCTCTTATATTTAACATCCCAATATAAATATGAACTCTTCACAAA GCGGTAGCACAGATCTGTGTTTTGTGCGCTCGTGGTGGTTTTAATGTCAAATGAAATTGGATGCCAAAAAAAATACTATTTATTCTTTAATTACATTTTA CTTGTATTTTAAAATAAGTACAGTTTGATTCCCTG
• Tissue: flowers
• Gene name: LI_gene_82473;
• Additional information: details;

Expression of Ll_transcript_144930

FPKM

• FPAB: 1.3
• FPNAB: 1.1
• LF1: 0.9
• LF2: 0.8
• LF3: 0.7
• LF4: 0.8
• UF1: 0.8
• UF2: 0.7
• UF3: 0.5
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_144930

• Blastp: Transcription elongation factor SPT6 homolog from Arabidopsis with 65.66% of identity
• Blastx: Transcription elongation factor SPT6 homolog from Arabidopsis with 68.29% of identity
• Eggnog: domain protein(COG2183)
• Kegg: Link to kegg annotations (AT1G65440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447115.1)
• Pfam: Acidic N-terminal SPT6 (PF14632.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;