| Id Trinity | FTRINITY_DN59058_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_144920 |
| Sequence | CGACCATTACCAATGATGTAAGTAAAACCCAGGAGTTTCGGGCGTGGTACTTAGCATCTCAAAATATAAATATCCCACATCCTCTTCATTCTTCATTCTT TCACTCTCAATTTCTCGACTCTCTCTATTGCTTCGTTTTTCTCTCATTCGCACTGCGATTATTTTCTTTGTTTCTCACTCTTTCTCTTGTTTTTAAATTC TTATTGTGTTTCGTAGCTTTTTCCAATCATGGCCAGAGGCGTAATCTCAGACGACGAAGATGAGGTTGAACTCGATGAGGAAGAGAGGGAACCCGTCGAT GGGGATGGATTGGATGAGGGTCGCGATGTGGATGATGATGAAGAGGATGAAGAAGAAGGCTTCTATCTGATACATCTTATTGTTACTGATTCAAATTCTC TCTCTCACTCCAGAAGGGCAGGATGAATATGAAAATGATGGATTTATAGTTGATGGGGATGAAGAGGAGCAGGATGAAGAAGAGAGAGCAGAAAGTGACG AGGAACGCCAGAAGAGGAGAAAGAAGAAGAGAAAGGAGGAATATGTCCTTGATGAAGATGATTATGAGCTGCTGGAAGACAATAACATCAATATTCATCG CCGGAAGGACATTAAAAAGTTCAAGCGGCTGAAAAAAGGCCAGAGGGATACTGAGGAGGAGCCGTCTGGGCTATCTGATGAGGAGGATTTTGTTGGAAGT GGTAAAGTTGGGAGAACTGCTGAGGAGAAGCTTAAACACCGTTTATTTGGCGATGATGAAGGAGCTCCACTTGAGGATATTGCTGAAGATGAGGAACAAG GAGAGGAGGAGGAGGAGGATGCAGACATTGGAGAAGATGATGAAATGGCCGACTTCATTGTGGATGAAGAAGAAGTTGATGAGAATGGAGCTCCCATGAG ACGAACAAAGCCGAAGAAAAAAATTAGGCAGGCACCTGGAGTCTCTTCCTCAGCTGTTCAAGAAGCTCAAGATATATTCGGTGATGTTGACAACTTTCTG CTGACTCGCAAGAAAAATCTGGAGTCAAATGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCGATTATTCTTTCTGAGAAGTATATGAGAGAGG AGGATGACCAGATTAGGGAAGTTGATCTTCCAGAGAGAATGCAGATATCGGAGATGAGTACTGGTACTCCTCCACTGGATGGAAGTATAGATGAAGAGAG CCAGTGGATAGTTAAGCAACTTAGTGAAGGAGCAGTCCCTTGGATTTGCAAAAAAAATCCAACCTCCCAAAATAATAGAAAGAACCTACCAATTGACGAG AATGATATTATCAGATTTTTGGAACTGTATCATGTGCAAAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAAGAGTGCTTAAGCCTGTTGAAAG ACCTAGAGCGACCCGAAGCTGGAGGTGAGAGTTCGGATAAGAATAACATGACACCTACTCTAAAGTGGCACAAGGTGCTTTGGGCTCTTCTGGACTTGGA CAGAAAGTGGTTGCTTCTTCAGAAGCGGAAGGGTGCCTTAGAGTCATACTATACTAAACGGTTTGAAGAGGAGTCCCGGCGTATTTATGATGAAACAAGA CTAAACTTGAACCGGCAATTATTTGAATCAGTTATGAGATCATTGAAGGATGCAGAATCTGAGAGGGAGGTCGATGATGTTGACTCCAAGTTCAACTTGC ATTTCCCACCAGGTGAGGCTGGTGTTGATGAAGGACAGTACAAGAGGCCAAAAAGGAAGTCAGTATATAGCACTTACTGTAAGGCAGGCCTGTGGGAGGT TGCGAACAGGTTTGGATGTAGTTCTGAGCAGCTTGGAATATGTCTATCTGAAGTTAAGGTGCCTGAGTTGGTAGACCCAAAGGAAACACCAGAGGAGATG GCTTCAAACTTTACATGTGCTATGTATAATACCCCTGAAGAAGTACTTAAGTGTGCTAGGCACATGGCAGCTATTGAGGTAAGTTGCGAGCCTAGCATTA GGAAACATGTTCGTAGCCACTTTCTTGATCATGCTGTGGTGTCAACATGTCCTACTGCTGATGGGAATGTGGCAATAGATTCTTTTCATGACTTCGCTGT GGTAAAGTGGCTCCGAGAGAAGCCTCTGTCTAAATTTGACGATGCACAGTGGCTTCTTATACAGAAGGCAGAAGAGGAGAAACTTCTTCAAGTCACTATT AAGCTTCCTGAAGAGAATCTTAATAAATTAATTGACCAATTCAATGAGTATTATGTTAGCGATAGTGTTAGCAGATCTGCTCAGCTGTGGAATGAACAGA GGAAGTTGATACTGAAAGATGCAATTTTTCGCCTTCTTTTACCATCAATGGACAAAGAGGCAAGAGGTGTATTGGCAAGCAAAGCAAAGAATTGGCTACT TATGGAGTACGGGAATGCCTTGTGGAATAAGGTTTCTGTGGGACCTTATCAACAGAAGGAGAATGATCTTAGCTCTGATGATGAGGCTGCTCCTAGGGTT ATGGCCTGCTGTTGGGGCCCTGGAAAGCCGCAAACAACATTTGTTATGTTGGATTCATCAGGGGAAGTGCTAGATGTGCTTTACACTGGATCCCTTACTT TAAGGTCACAGAATCCTAGTGACCAACAACGGAAGAAAAATGACCAGGAACGTGTTTTGAAGTTTATGACAGATCACCAACCACATGTTGTCGTTTTAGG TGCAGTAAATTTGTCTTGCACTCGTTTAAAGGAAGATATATATGAGGTCAGAATTTGGTTTTTATGCATGCGTCATTATTTTGGTTCCATTCCATTCCAT TCAACCAATCATGCACCCAATGGTTTGTTTTATATATGTACAAATTTTCTCAAATAAGCAATTACTCTGGGCACATATAACTACCCTCCTCAGGCCCCAT TAGATGGGAGCCTCATGCATTGGGCTGCCGTTTAAAAAGGAATTACTCTGTTCAAGCCTCCTAATCATCATAGTGTGGCCATGTAATACTTATGCTGTTA TGCATTGAAGTGAGTAATGTAATTTTCTTAGTATAAGTTGGGGTGAAACCATTTGATAAGTAGAATTAGTAGTTATGTTTTCATCCTACTGGAGAAGTCG GTATTTGGTCATAATTAACCCATACTAATTTGCCAGAGTCATGGTGTTTCAAGTTTGAATTGGGAATTTCTTACAATTCTTTCGATCCATGTATATAACC CTGTCAAGTGGGAAAAGACTTTTGCTGTTGTTGCATCTTGGTTCATAATTAACCCATACTAATTTGCCAGAGTCATGGTGTTTCAAGTTTGAATTGGGAA TTTCTTACAATTâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_82473; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_144920
| Blastp | Transcription elongation factor SPT6 homolog from Arabidopsis with 66.72% of identity |
|---|---|
| Blastx | Transcription elongation factor SPT6 homolog from Arabidopsis with 63.51% of identity |
| Eggnog | domain protein(COG2183) |
| Kegg | Link to kegg annotations (AT1G65440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458019.1) |
| Pfam | Helix-turn-helix DNA-binding domain of SPT6 (PF14641.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |