| Id Trinity | FTRINITY_DN59072_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_146837 |
| Sequence | ATAACAGCAATGATCGTATATTTGGGCTCCTCGTCCATAGCCCGCATGCGATAAATCATCCAGAGAAGAAATCACTTCAATTTGGTATGTGAGAATAAGA AGAAAAAATGAAGCTTTTCAACATTGGAATAGTTTTCACTGCATATAGAAACTTCAGCACAAAGGGTTTCCGAAAACCCTCATTTTTGTCTTACAGTAAG TACAAGAGTAAGTATAAAACATCATCAACAATGCAAACCGTAAGGAGGCCTAAAATTCAATGGACTGAGGAGCAGAAGAGTGTGTTATCTTCTGTTTCTC AGGGAAAATCTGTGTTCATCACTGGTGCAGCTGGGACCGGAAAGACGAAGTTGGTCACTGAGATTGTTAAGTTGCTGAATAAATTGCATACCCCATCTAA GGTTTTTGTTACAGCTTCAACTGGGCTTGCGGCAATTTCGATAAAGGGACAAACTTTGCACTCGTTTGCTGGTATCCATTACCACACCAATGATCCGAAG CTGTTGTATGATAGTATTAAGTGCTGCAAGAGGGCATACTGGAGGTGGCGGAAGGTTAAAGCTTTAGTTATGGATGAAATCAGTATGGTGGATGCAAGGT TTTTTGATAACCTTGAGAGAGTTGCAAGAGAGTTACGGGGTGTGGGTGAAACATGGGGAGGAATCCAGCTGGTTGTGGCTGGGGATTTCTTCCAGTTACC ACCGATTCCAGATAATGATTCCCTCGATGTGAAATATGCGTTTGAAGCTGATTGTTGGAAGGAAAGCTTTGATTTCATGATAGAGCTTACTAAGATCTTG AGGCAGTCTGATCCGCGGCTTATTGAGTTGCTTCAGGGTATAAGGATGGGAAAGAGTGATCCCGAGGACTTGTCAATCCTAAAGAGCTACTGCTCCAAGA CTAAGTCTGATCCCTCCGCAGTGCAGCTCTTCCCACGGAAACAAAATGTGAAGAAAGTTAACGAGGAGAGGCTTAAAAAGCTTGGAAAAGTCTGTTGTTG TTTATAGAGCTGTTGATGATGGCGCTAAGGCTTGGATGAAGCAGCTCAATCAAGGGATTGCACCTGATGAAGTCTCAATTTGTGTAGGCGCAAGAGTTAT GCTGGTCAAGAATTTGCGTACTTGTAAAGGACTGGTGAATGGAGCAACCGGTACGGTTGTGGAATTAGTCAAGTCGGTGGATGCTGATGGCGTGTGCCCT GATAACCTGTTGCCGATAGTCAAATTTGATTCAGGCAAAGTTTTATGGATTAAGCCACAAGAGTGGCATGTAATGGTTGGAAATAAAATTGTTGCTACAA GGAAACAGATTCCACTTATACTGGCATGGGCTCTGAGCATCCACAAGTGCCAGGGAATGACTCTTGACAAAGCTTACATCAATCTGTCACGAGCATTTGG CTGTAGAATGGTTTATACATCACTTTCTCGTGTTAGAAGCATGGATGGTCTTCATTTATCTGGGTTTACAGCCTCGATGATTCGTGCAGATCCCAAGGTT TCAGACTTCTACAGAAATATCACTTTGCAACATAATAACAAAGATCAAGGCAATAGCAGCACTAAGAGTACAGAGAACTCTAGCAGCAACATAACTTGTG CTTCAGGAAAAGCAGGCACTGCAGTGACCGAGAGACATTTTTCACTCTCTGAATTTCTAGCTAGACGCTCACTTTTGTGAAATTGTTATGGCCTATGGAT TTCAGGTGCAATTTCAACAATGAGAAAATACAATTTGATCAATCAGTTCAGTTTAGAGAATGGAAGGAAAGTTTGACATCATTGCTGAACCTTCCATTCT TCTTAATCAATTAAAGAATGTCAACTATTTTAGTGTCAAGTATGATTGATATCTTATGAAGCTTTCCTATTAAATGGATTTTTACATCATAGTTACTTTG GTACTCAGAAATCAGAATGGGTAAATCGTTCACTTGGGTAAGTGTTTCGTCATTTTTTATATTAATTTTATGAGTCATCTTTACGACGAACCTGTTATGT GCAACACAATACGGTCAATATGTCGGATAAATGAGAGAATCATGCACAATACGGTGAATATGTCGGATAAATGAGAGAATCATATAACTATGATTTACAT TCATTTTAGTACATTTTTCAAGTCTTTCTACTTAGCCTTCTTATGAAAAGAAAAGAAAGTTAATATCATAGAAGTGAGTTAATGACTATGTTTAGTTAGG ACTATCAATCTGGTCTCAATTCTTAAGATTGGGTTAATTTTTAGTCTTTCTATTGATGATGTTGTGCTGTTATAAGAAGAAGTTGATAGGATGTATGTTA TGATGTTTCCTCACCATCAGATGATAAAGTTTCTCTCAAGGGAAGAAAAATTTGCAGGAGGTGTTAAAGAGAGATTCTGGGTGTTGTTTGTTGTTTTTAT TATGTACAGTACTTTATTTATTGGAAAAGTATTTTATAAGTGTTTTGAATCTCTTTACTTTGATTTTAGTTAAGTTATTGAACTCGGTTTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82573; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146837
| Blastp | ATP-dependent DNA helicase PIF1 from Aspergillus with 43.39% of identity |
|---|---|
| Blastx | ATP-dependent DNA helicase PIF1 from Xenopus with 42.4% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AN6895.2) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426349.1) |
| Pfam | UvrD/REP helicase N-terminal domain (PF00580.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |