| Id Trinity | FTRINITY_DN59077_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_146117 |
| Sequence | CCTCGAGTATATATAACTATATATACAGTGGGTGCAACACTTTCATTCTCACACTCTTCTTTGTCTCAGTCAATTACCACAACACGCTTCTTCCTCACGC CACCACCATAATACTACTCTCTCTGCTTCGCCGCCACCGTCACCGCCACCACTGCCGCCTTATCATCTGTTCCTTCCTTCAGTTTGAGTTCATCTAAATT TTGATGGATACCGATAATTGGAGACCTAATCAAAGCACTGAACCCAATATGGACAATAGTGATTGGAGAGGTCAACTGCAGCCTGAATCACGCCAAAGAA TTGTCAACAAAATAATGGACACATTAAAAAGGCATCTTCCAGTCTCTGGTCAAGAGGGATTGCATGAGCTTCGGAAGATTGCTCAAAGGTTTGAAGAGAA GATTTTCACTGCTGCAACAAGTCAGTCTGATTATCTACGGAAGATATCTTTGAAGATGCTTACAATGGAGACTAAATCCCAGGGCACACTGGCCAACAAT ATACCATCAAATCAAGTTGGCCCTAGCAATAAACCTCCTGATCCAGGACTTGGTATGCAGCCCCAAGTTCACAATCCAGGGCAGCAACATACTACCCCTC TGCCTAATCAGTCCCCGTCACGCCAACAGCTTTTATCTCAGAATATTCAAAATAACATTGCATCTCAACCTAACTTGCCAGCTGTATCTAGTCTAGGTCA GACTTCCATCCAAAATGTTGGCCAGAATTCCAATGTGCAGAATATAGCTGTACAGAATTCAGCGGGAGACACAATTGGGCAGAATTCCAATATGCAAAAT ATGTTTGCTGCTTCCCAGAGACAAATGCCAGGAAGGCAGCAGGTTGTTCCGCAACAACAGCAGCAGCATTCACATAATCCACAGCAATTACTGTTCCAGC AGCAACAGCTTTTAAAGCATAAGATCCAACAGCAACAGCAGCAACAACAGCAACAGCAGAACCTTCTACAACCAAATCAGTTGCAATCTCAGCAATCTGT CATGCAGCCTTCCATGATGCAAACATCTCTATCTAGCATTCAGCACAATCAGCAGCCCAATAATGTTCAACAGTCACAGTCCATGCTTCAACAACACCCC CAAGTTACCAGGCAACAGCAACAGCACACTTCTGTTATTCATAAGCAACAAACCTCAGTGACTCAACAGTCAATATTACCTCAACAGCAGCAACAGCAGC TTATGGGGTCACAGGCAAATGCAACAAGCATGCAACATTCTTCAATGCTTGGATCACAGAACAATGGTGGTGATATGCAGCAACCACAGAGGTTGCTTGC ACAGCAGAATAATCTTTCAAACCTGCAACAGCAGCAGTTAATAAATCAGCAAAACAACCTCACAAATATGCATCAACAGTTAGGAAATAATGTCTCTGGG TTACAGCCACAGCAAGTCCTTGGAGCTCAAGCTGGCAACTCTGGCATGCAAACAAGCCAGCCCTCTGCACATGTGCCACAACAAACTAAGGTACCAATGC AGCAACAGAATACATCAAATTTGTTATCACCTCAAGCTCAGAAGCCACAGGCTCCACAGCAGCAATTGATGCCGCAGGTTCAGTCCCACCCTGCACATTT GCAACAGCAACCAAATTTTTTACAAAGAGATATGCAGCAAAAACTTCAGGCATCAGGTTCCTTGCCTCAACAGCATAGTGTTGTTGATCAACAAAAGCAA TTATATAAATCACAAAGACCTATTCCAGAAACATCATCAACTTCTCTGGATTCAACAGCACAGACTGGACAACCAAATGGGGATGACTGGCAAGAAGAAG TGTACCAAAAGATCAAAACCATGAAAGAAAGTTACTTGCCCGAGTTGAATGAAATGTACCAGAAAGTTGCTACTAAACTTCAGCAGCATGATTCCCTTTC CCATCAACCAAAGACAGATCAGCTTGAAAGGCTGAAGGTTTTCAAAATGATGTTAGAGCGTATTATAACATTCCTCCAGGTTCCCAAGAGCAACATTTTG CCCAATTTCAAAGAGAAAATGGGCTCATATGAGAAGCAGATTATAAATTTCATAAATACAAATAGGCCTAGGAAAGCAATGTCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_82619; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_146117
| Blastp | Mediator of RNA polymerase II transcription subunit 15a from Arabidopsis with 48.22% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 15a from Arabidopsis with 53.09% of identity |
| Eggnog | NA(ENOG4111KNE) |
| Kegg | Link to kegg annotations (AT1G15780) |
| CantataDB | Link to cantataDB annotations (CNT0000883) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448071.1) |
| Pfam | KIX domain (PF16987.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |